Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tlr3

Gene Name Gene ID Reads Annotation
tlr3 ENSDARG00000016065, ENSDARG00000117078 66 toll-like receptor 3 [Source:ZFIN;Acc:ZDB-GENE-040219-7]










Genes with expression patterns similar to tlr3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tlr3 ENSDARG00000016065, ENSDARG00000117078 66 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 toll-like receptor 3 [Source:ZFIN;Acc:ZDB-GENE-040219-7]
2. ccr12.3 ccr12.3 79 1.818 - 1.000 - - - 0.818 - - -
3. NRP2 NRP2 5 1.768 - 1.000 - - 0.768 - - - -
4. si:ch211-149b19.2 ENSDARG00000088882 28 1.76 - 0.955 - - - - 0.805 - - si:ch211-149b19.2 [Source:ZFIN;Acc:ZDB-GENE-110411-60]
5. hamp2 hamp2 67 1.755 - 1.000 - - - 0.755 - - -
6. slc5a12 ENSDARG00000005004 15 1.744 - 1.000 0.744 - - - - - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1343]
7. SMPDL3B ENSDARG00000010130 62 1.723 - 0.968 0.755 - - - - - - sphingomyelin phosphodiesterase, acid-like 3B [Source:ZFIN;Acc:ZDB-GENE-041008-132]
8. CABZ01072607.1 ENSDARG00000113761 784 1.698 - 0.864 - - - 0.834 - - - dynein cytoplasmic 2 heavy chain 1 [Source:NCBI gene;Acc:100332402]
9. DGKE ENSDARG00000104793, ENSDARG00000113394, ENSDARG00000114662 45 1.677 - - - - 0.822 0.855 - - - diacylglycerol kinase, epsilon [Source:ZFIN;Acc:ZDB-GENE-090512-7]
10. CR352265.1 ENSDARG00000062758 39 1.662 - 0.810 - - - 0.852 - - -
11. zgc:136791 97 1.627 - 0.769 - - - 0.858 - - - zgc:136791, transcript variant X3
12. zgc:154040 16 1.624 - - - - 0.768 0.856 - - - zgc:154040
13. DLEU7 DLEU7 91 1.612 0.756 - - - - 0.856 - - -
14. METTL24 ENSDARG00000075817 126 1.61 0.802 - - - - 0.808 - - - methyltransferase like 24 [Source:ZFIN;Acc:ZDB-GENE-070424-138]
15. inhbaa ENSDARG00000012671 207 1.604 0.847 - - - - 0.757 - - - inhibin subunit beta Aa [Source:ZFIN;Acc:ZDB-GENE-000210-21]
16. uroc1 ENSDARG00000070394 357 1.592 0.860 - - - - 0.732 - - - urocanate hydratase 1 [Source:ZFIN;Acc:ZDB-GENE-081022-148]
17. CU570781.1 ENSDARG00000094656 49 1.586 - 0.716 - - - 0.870 - - -
18. grhl2a ENSDARG00000058342 153 1.574 0.704 - - - - 0.870 - - - grainyhead-like transcription factor 2a [Source:ZFIN;Acc:ZDB-GENE-050913-123]
19. stub1 ENSDARG00000045228 105 1.572 - 0.727 - - - 0.845 - - - STIP1 homology and U-Box containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2963]
20. chn2 ENSDARG00000011845 217 1.566 - - - - - 0.859 0.707 - - chimerin 2 [Source:ZFIN;Acc:ZDB-GENE-091020-5]
21. si:dkey-242h9.3 ENSDARG00000069189 83 1.563 0.744 - - - - 0.819 - - - si:dkey-242h9.3 [Source:ZFIN;Acc:ZDB-GENE-060503-347]
22. wu:fb11h05 wu:fb11h05 126 1.561 - - - - - 0.854 0.707 - -
23. bmper ENSDARG00000101980 668 1.531 0.771 - - - - 0.760 - - - BMP binding endothelial regulator [Source:ZFIN;Acc:ZDB-GENE-030219-146]
24. si:busm1-163l24.3 31 1.511 - - 0.746 - - - 0.765 - - si:busm1-163l24.3
25. pitpnb ENSDARG00000036005 513 1.499 - 0.755 - - - 0.744 - - - phosphatidylinositol transfer protein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-895]
26. h2afy ENSDARG00000099329 286 1.489 0.750 - - - - 0.739 - - - H2A histone family, member Y [Source:ZFIN;Acc:ZDB-GENE-060421-4796]
27. METTL15 ENSDARG00000089236 39 1.459 0.745 0.714 - - - - - - - methyltransferase like 15 [Source:ZFIN;Acc:ZDB-GENE-130530-958]
28. lin7b ENSDARG00000037932 150 1.457 0.753 0.704 - - - - - - - lin-7 homolog B (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-1]
29. nisch ENSDARG00000043077 11 1 - 1.000 - - - - - - - nischarin [Source:ZFIN;Acc:ZDB-GENE-050208-570]
30. he1a 48624 1 - 1.000 - - - - - - - hatching enzyme 1a, transcript variant X1
31. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1 - 1.000 - - - - - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
32. 5S_rRNA_6 5S_rRNA_6 11 1 - 1.000 - - - - - - -
33. si:ch211-197g15.5 si:ch211-197g15.5 10 1 - 1.000 - - - - - - -
34. zgc:174259 ENSDARG00000091136, ENSDARG00000115432 3 1 - 1.000 - - - - - - - zgc:174259 [Source:ZFIN;Acc:ZDB-GENE-080213-10]
35. krt1-c5 ENSDARG00000026979 325 1 - 1.000 - - - - - - - keratin, type 1, gene c5 [Source:ZFIN;Acc:ZDB-GENE-060316-3]
36. si:dkey-42p8.3 1117 1 - 1.000 - - - - - - - si:dkey-42p8.3, transcript variant X1
37. wt1b ENSDARG00000007990 39 1 - 1.000 - - - - - - - wilms tumor 1b [Source:ZFIN;Acc:ZDB-GENE-050420-319]
38. ABCC10 ENSDARG00000077988, ENSDARG00000111885, ENSDARG00000113210 81 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 10 [Source:ZFIN;Acc:ZDB-GENE-050517-24]
39. gsdf ENSDARG00000075301 6 1 - 1.000 - - - - - - - gonadal somatic cell derived factor [Source:ZFIN;Acc:ZDB-GENE-101029-3]
40. FAM149A ENSDARG00000073709 7 1 - 1.000 - - - - - - - family with sequence similarity 149 member A [Source:ZFIN;Acc:ZDB-GENE-081107-36]
41. sox11a ENSDARG00000077811 25 1 - 1.000 - - - - - - - SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
42. si:ch211-284e13.11 ENSDARG00000091997 3 1 - 1.000 - - - - - - - si:ch211-284e13.11 [Source:ZFIN;Acc:ZDB-GENE-060526-157]
43. edn3b ENSDARG00000086669 8 1 - 1.000 - - - - - - - endothelin 3b [Source:ZFIN;Acc:ZDB-GENE-090313-235]
44. b4galnt3a ENSDARG00000078749 3 1 - 1.000 - - - - - - - beta-1,4-N-acetyl-galactosaminyl transferase 3a [Source:ZFIN;Acc:ZDB-GENE-060503-519]
45. si:dkey-199m13.2 si:dkey-199m13.2 31 1 - 1.000 - - - - - - -
46. EFEMP1_1 EFEMP1_1 8 1 - 1.000 - - - - - - -
47. zgc:92161 ENSDARG00000101749 27 1 - 1.000 - - - - - - - zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
48. pgap1 ENSDARG00000062465 30 1 - 1.000 - - - - - - - post-GPI attachment to proteins 1 [Source:ZFIN;Acc:ZDB-GENE-090313-216]
49. si:dkey-199m13.5 ENSDARG00000098876 4 1 - 1.000 - - - - - - - si:dkey-199m13.5 [Source:ZFIN;Acc:ZDB-GENE-110913-174]
50. myo1f ENSDARG00000078734 100 1 - 1.000 - - - - - - - myosin IF [Source:ZFIN;Acc:ZDB-GENE-081104-506]
51. radil ENSDARG00000079779 14 1 - 1.000 - - - - - - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
52. tbc1d22b ENSDARG00000026988 18 1 - 1.000 - - - - - - - TBC1 domain family, member 22B [Source:ZFIN;Acc:ZDB-GENE-091118-28]
53. FGD5_1 FGD5_1 8 1 - 1.000 - - - - - - -
54. man2a1 ENSDARG00000102200 12 1 - 1.000 - - - - - - - mannosidase, alpha, class 2A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060526-31]
55. COL9A3 ENSDARG00000037845 1 1 - 1.000 - - - - - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
56. ENSDARG00000088134 ENSDARG00000088134 16 1 - 1.000 - - - - - - -
57. si:dkey-270b7.4 si:dkey-270b7.4 11 1 - 1.000 - - - - - - -
58. mtcl1 ENSDARG00000091408 6 1 - 1.000 - - - - - - - microtubule crosslinking factor 1 [Source:ZFIN;Acc:ZDB-GENE-120508-3]
59. park2 42 1 - 1.000 - - - - - - - parkin RBR E3 ubiquitin protein ligase
60. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1 - 1.000 - - - - - - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
61. psme1 ENSDARG00000002165, ENSDARG00000115834 72 1 - 1.000 - - - - - - - proteasome activator subunit 1 [Source:ZFIN;Acc:ZDB-GENE-991110-17]
62. CHST7 ENSDARG00000044341 3 1 - 1.000 - - - - - - - carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 [Source:ZFIN;Acc:ZDB-GENE-131121-150]
63. 5S_rRNA_16 5S_rRNA_16 10 1 - 1.000 - - - - - - -
64. card9 ENSDARG00000067672 33 1 - 1.000 - - - - - - - caspase recruitment domain family, member 9 [Source:ZFIN;Acc:ZDB-GENE-060531-94]
65. SEC14L1 ENSDARG00000101792 4 1 - 1.000 - - - - - - - SEC14 like lipid binding 1 [Source:HGNC Symbol;Acc:HGNC:10698]
66. Mar-03 Mar-03 44 1 - 1.000 - - - - - - -
67. KLHL29_1 KLHL29_1 158 1 - 1.000 - - - - - - -
68. CABZ01030033.1 ENSDARG00000117613 3 1 - 1.000 - - - - - - -
69. zgc:165481 ENSDARG00000060092 95 1 - 1.000 - - - - - - - zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
70. SPTBN4 ENSDARG00000092624 6 1 - 1.000 - - - - - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
71. PGBD4_1 PGBD4_1 1 1 - 1.000 - - - - - - -
72. evx2 ENSDARG00000059255 317 1 - 1.000 - - - - - - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
73. inpp5jb ENSDARG00000093359 4 1 - 1.000 - - - - - - - inositol polyphosphate-5-phosphatase Jb [Source:ZFIN;Acc:ZDB-GENE-081104-46]
74. FBXL6 ENSDARG00000077227 28 1 - 1.000 - - - - - - - F-box and leucine-rich repeat protein 6 [Source:ZFIN;Acc:ZDB-GENE-060810-162]
75. U6_19 U6_19 1 1 - 1.000 - - - - - - -
76. cdca9 ENSDARG00000088639, ENSDARG00000113114 3 1 - 1.000 - - - - - - - cell division cycle associated 9 [Source:ZFIN;Acc:ZDB-GENE-090706-4]
77. CCDC18_1 CCDC18_1 3 1 - 1.000 - - - - - - -
78. stxbp4 ENSDARG00000076997 20 1 - 1.000 - - - - - - - syntaxin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-110420-5]
79. gng2_1 ENSDARG00000056831 113 1 - 1.000 - - - - - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
80. CABZ01053592.1 ENSDARG00000117388 6 1 - 1.000 - - - - - - -
81. plxnc1 ENSDARG00000015278 501 1 - 1.000 - - - - - - - plexin C1 [Source:ZFIN;Acc:ZDB-GENE-030131-1620]
82. si:dkey-228i19.32 si:dkey-228i19.32 9 1 - 1.000 - - - - - - -
83. si:dkey-69c19.1 si:dkey-69c19.1 37 1 - 1.000 - - - - - - -
84. dpyda dpyda 12 1 - 1.000 - - - - - - -
85. pik3r5 ENSDARG00000102762 56 1 - 1.000 - - - - - - - phosphoinositide-3-kinase, regulatory subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2308]
86. KCNJ3 KCNJ3 24 1 - 1.000 - - - - - - -
87. zgc:173652 22 1 - 1.000 - - - - - - - zgc:173652
88. slc44a1a ENSDARG00000015946 10 1 - 1.000 - - - - - - - solute carrier family 44 (choline transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050417-204]
89. FP236810.3 FP236810.3 1 1 - 1.000 - - - - - - -
90. COX5B ENSDARG00000015978 70 1 - 1.000 - - - - - - - cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
91. RNF122 RNF122 29 1 - 1.000 - - - - - - -
92. mir142a 20 1 - 1.000 - - - - - - - microRNA 142a
93. si:dkey-5n18.1 ENSDARG00000043436 220 1 - 1.000 - - - - - - - si:dkey-5n18.1 [Source:ZFIN;Acc:ZDB-GENE-041014-144]
94. si:dkeyp-27e10.7 si:dkeyp-27e10.7 5 1 - 1.000 - - - - - - -
95. irf8 ENSDARG00000056407 85 1 - 1.000 - - - - - - - interferon regulatory factor 8 [Source:ZFIN;Acc:ZDB-GENE-040718-367]
96. MFAP4_6 MFAP4_6 162 1 - 1.000 - - - - - - -
97. si:dkey-188i13.10 ENSDARG00000075151 22 1 - 1.000 - - - - - - - si:dkey-188i13.10 [Source:ZFIN;Acc:ZDB-GENE-090313-208]
98. rxfp3.2a 11 1 - 1.000 - - - - - - - relaxin/insulin-like family peptide receptor 3.2a
99. si:rp71-26b20.1 si:rp71-26b20.1 11 1 - 1.000 - - - - - - -
100. zgc:158446 36 1 - 1.000 - - - - - - - zgc:158446

There are 1006 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA