Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for timp2b

Gene Name Gene ID Reads Annotation
timp2b ENSDARG00000075261 867 TIMP metallopeptidase inhibitor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2655]










Genes with expression patterns similar to timp2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. timp2b ENSDARG00000075261 867 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TIMP metallopeptidase inhibitor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2655]
2. grhl3 ENSDARG00000078552 897 2.376 - - - - - 0.797 0.716 - 0.863 grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]
3. sorbs3 ENSDARG00000037476 511 1.713 - - - - - 0.828 - - 0.885 sorbin and SH3 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-1]
4. FBXW7 ENSDARG00000060994 1675 1.691 - 0.862 - - - - - - 0.829 F-box and WD repeat domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-090313-79]
5. tmem59 ENSDARG00000019033 2692 1.68 - - - - - 0.792 - - 0.888 transmembrane protein 59 [Source:ZFIN;Acc:ZDB-GENE-070912-397]
6. si:ch211-226m16.2 ENSDARG00000036785 2163 1.649 0.744 - - - - - - - 0.905 si:ch211-226m16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2302]
7. CU633910.1 CU633910.1 828 1.638 - 0.765 - - - - - - 0.873
8. twist3 ENSDARG00000019646 1221 1.626 - - - - - 0.719 - - 0.907 twist3 [Source:ZFIN;Acc:ZDB-GENE-000210-7]
9. GRAMD1C ENSDARG00000076238 795 1.62 - - - - - 0.758 - - 0.862 GRAM domain containing 1c [Source:ZFIN;Acc:ZDB-GENE-050506-88]
10. ralgps2 ENSDARG00000026519 1610 1.618 - - - - - 0.816 - - 0.802 Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
11. casp2 ENSDARG00000062052 559 1.616 - - - - - - 0.736 - 0.880 caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
12. chid1 ENSDARG00000069673 675 1.607 0.727 - - - - - - - 0.880 chitinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9169]
13. spag1a ENSDARG00000004017 1140 1.607 - 0.793 - - - - - 0.814 - sperm associated antigen 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9443]
14. xpnpep1 ENSDARG00000029011 1723 1.596 - 0.786 - - - - - - 0.810 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-999]
15. BX908793.1 BX908793.1 573 1.584 - - - - - 0.704 - - 0.880
16. FAM83H FAM83H 190 1.577 - - - - - 0.704 - - 0.873
17. IKZF2 ENSDARG00000069111 1366 1.57 - - - - - - 0.736 - 0.834 IKAROS family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-100922-169]
18. EPHA2 EPHA2 867 1.56 - 0.724 - - - - - - 0.836
19. gtf2h4 ENSDARG00000007136, ENSDARG00000036071 760 1.543 - 0.712 - - - - - - 0.831 general transcription factor IIH, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6779]
20. crebbpa ENSDARG00000104609 1739 1.529 0.779 - - - - - - - 0.750 CREB binding protein a [Source:ZFIN;Acc:ZDB-GENE-050208-439]
21. nupr1 6040 1.52 - 0.789 - 0.731 - - - - - nuclear protein 1
22. rps6ka3a ENSDARG00000035556, ENSDARG00000116641 3608 1.519 - 0.762 - - - - - - 0.757 ribosomal protein S6 kinase a, polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-030219-119]
23. zgc:194398 ENSDARG00000078250 815 1.503 - 0.718 - - - - 0.785 - - zgc:194398 [Source:ZFIN;Acc:ZDB-GENE-081022-111]
24. mospd2 ENSDARG00000026024 854 1.496 0.740 - - - - 0.756 - - - motile sperm domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041114-1]
25. tpbga ENSDARG00000099609 1051 1.494 - - - - - 0.731 - - 0.763 trophoblast glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-030827-4]
26. tnikb ENSDARG00000009031 1836 1.491 - 0.722 - - - - - - 0.769 TRAF2 and NCK interacting kinase b [Source:ZFIN;Acc:ZDB-GENE-051113-320]
27. prpf6 ENSDARG00000091367 1868 1.487 - - - - - - 0.709 - 0.778 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
28. pdcd10a ENSDARG00000035054, ENSDARG00000109378 2227 1.481 - 0.728 - - - - 0.753 - - programmed cell death 10a [Source:ZFIN;Acc:ZDB-GENE-040426-1432]
29. nrp2a_1 ENSDARG00000096546 3358 1.475 - - - - - 0.700 - - 0.775 neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
30. gucd1 ENSDARG00000068438, ENSDARG00000111855 438 1.474 - 0.722 - - - 0.752 - - - guanylyl cyclase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-872]
31. vgll4l ENSDARG00000068409, ENSDARG00000110132 844 1.467 - - - - - 0.764 - 0.703 - vestigial like 4 like [Source:ZFIN;Acc:ZDB-GENE-070112-1682]
32. tgfb1a ENSDARG00000041502 972 1.444 - 0.737 - - - 0.707 - - - transforming growth factor, beta 1a [Source:ZFIN;Acc:ZDB-GENE-030618-1]
33. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 0.954 0.954 - - - - - - - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
34. fam3c ENSDARG00000056152 3833 0.93 - - - - - - - - 0.930 family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
35. DNAH11 ENSDARG00000077384, ENSDARG00000094282 372 0.924 - - - - - - - - 0.924 dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
36. cyr61 ENSDARG00000023062 1213 0.92 - - - - - - - - 0.920 cysteine-rich, angiogenic inducer, 61 [Source:ZFIN;Acc:ZDB-GENE-040426-3]
37. erbb3a ENSDARG00000006202 903 0.92 - - - - - - - - 0.920 erb-b2 receptor tyrosine kinase 3a [Source:ZFIN;Acc:ZDB-GENE-030916-3]
38. CR753886.1 ENSDARG00000090548 22 0.914 0.914 - - - - - - - - prolactin releasing hormone 2 [Source:NCBI gene;Acc:793765]
39. zfp36l2 ENSDARG00000021806, ENSDARG00000116819 2176 0.914 - - - - - - - - 0.914 zinc finger protein 36, C3H type-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5873]
40. hoxb13a ENSDARG00000056015 174 0.912 - - - - - - - - 0.912 homeobox B13a [Source:ZFIN;Acc:ZDB-GENE-050812-1]
41. si:dkey-238c7.16 ENSDARG00000069537, ENSDARG00000111432 5140 0.911 - - - - - - - - 0.911 si:dkey-238c7.16 [Source:ZFIN;Acc:ZDB-GENE-030131-4169]
42. angptl6 ENSDARG00000020265 273 0.91 - - - - - - - - 0.910 angiopoietin-like 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9735]
43. CABZ01039859.1 ENSDARG00000076361 540 0.909 - - - - - - - - 0.909 beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
44. CABZ01032467.1 CABZ01032467.1 400 0.908 - - - - - - - - 0.908
45. tbl1xr1a ENSDARG00000058696 5439 0.904 - 0.904 - - - - - - - transducin (beta)-like 1 X-linked receptor 1a [Source:ZFIN;Acc:ZDB-GENE-050522-314]
46. mto1 ENSDARG00000055679 859 0.902 - - - - - - - - 0.902 mitochondrial tRNA translation optimization 1 [Source:ZFIN;Acc:ZDB-GENE-070209-253]
47. FP236810.2 ENSDARG00000113218 140 0.9 - - - - - - - - 0.900 UDP-glucuronosyltransferase 2B20-like [Source:NCBI gene;Acc:571561]
48. gk5 ENSDARG00000062864 738 0.897 - - - - - - - - 0.897 glycerol kinase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-49]
49. WDR81 ENSDARG00000079702 822 0.897 - - - - - - - - 0.897 WD repeat domain 81 [Source:ZFIN;Acc:ZDB-GENE-030131-3389]
50. adnp2a ENSDARG00000060937 562 0.896 - - - - - - - - 0.896 ADNP homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040914-55]
51. mmp14b ENSDARG00000008388, ENSDARG00000111313 2125 0.896 - - - - - - - - 0.896 matrix metallopeptidase 14b (membrane-inserted) [Source:ZFIN;Acc:ZDB-GENE-030901-2]
52. si:ch73-138e16.8 175 0.896 - - - - - - - - 0.896 si:ch73-138e16.8
53. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 0.894 - - - - - - - - 0.894 integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]
54. glsb ENSDARG00000040705 1439 0.892 - - - - - - - - 0.892 glutaminase b [Source:ZFIN;Acc:ZDB-GENE-030616-550]
55. zfr2 ENSDARG00000071683 780 0.892 - - - - - - - - 0.892 zinc finger RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-184]
56. mmp2 ENSDARG00000017676 2347 0.891 - - - - - - - - 0.891 matrix metallopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9123]
57. cdx4 ENSDARG00000036292 1225 0.891 - - - - - - - - 0.891 caudal type homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-980526-330]
58. MYL4 ENSDARG00000011519 309 0.891 - - - - - - - - 0.891 myosin, light chain 4, alkali; atrial, embryonic [Source:ZFIN;Acc:ZDB-GENE-050626-112]
59. thbs4b ENSDARG00000020072 2500 0.89 - - - - - - - - 0.890 thrombospondin 4b [Source:ZFIN;Acc:ZDB-GENE-020708-4]
60. si:dkey-91i10.2 ENSDARG00000074034 334 0.89 - - - - - - - - 0.890 si:dkey-91i10.2 [Source:ZFIN;Acc:ZDB-GENE-050208-441]
61. ccnc ENSDARG00000009607 1240 0.889 - - - - - - - - 0.889 cyclin C [Source:ZFIN;Acc:ZDB-GENE-030131-7369]
62. magi3 magi3 962 0.889 - - - - - - - - 0.889
63. tp53i11b ENSDARG00000006025 569 0.888 - - - - - - - - 0.888 tumor protein p53 inducible protein 11b [Source:ZFIN;Acc:ZDB-GENE-030131-6328]
64. grasp ENSDARG00000000588, ENSDARG00000113330 766 0.888 - - - - - - - - 0.888 GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein [Source:ZFIN;Acc:ZDB-GENE-060312-30]
65. GUSB ENSDARG00000063126 2712 0.888 - - - - - - - - 0.888 glucuronidase, beta [Source:ZFIN;Acc:ZDB-GENE-070705-256]
66. lamb1b ENSDARG00000045524, ENSDARG00000116025 613 0.888 - - - - - - - - 0.888 laminin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-041210-197]
67. PAQR4 PAQR4 2150 0.887 - - - - - - - - 0.887
68. smarcd2 ENSDARG00000088877 416 0.887 - - - - - - - - 0.887 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
69. zgc:113184 ENSDARG00000098181 500 0.887 - - - - - - - - 0.887 zgc:113184 [Source:ZFIN;Acc:ZDB-GENE-050522-9]
70. eve1 ENSDARG00000056012 144 0.886 - - - - - - - - 0.886 even-skipped-like1 [Source:ZFIN;Acc:ZDB-GENE-980526-69]
71. kti12 ENSDARG00000054301, ENSDARG00000112513, ENSDARG00000114091 382 0.886 - - - - - - - - 0.886 KTI12 chromatin associated homolog [Source:ZFIN;Acc:ZDB-GENE-060825-174]
72. BX004880.1 BX004880.1 638 0.886 - - - - - - - - 0.886
73. tmem119b ENSDARG00000068036, ENSDARG00000113511 1119 0.886 - - - - - - - - 0.886 transmembrane protein 119b [Source:ZFIN;Acc:ZDB-GENE-070410-49]
74. APBA3 APBA3 852 0.885 - - - - - - - - 0.885
75. TIMP4 TIMP4 599 0.885 - - - - - - - - 0.885
76. stk17b ENSDARG00000014348, ENSDARG00000114208 1447 0.885 - - - - - - - - 0.885 serine/threonine kinase 17b (apoptosis-inducing) [Source:ZFIN;Acc:ZDB-GENE-040426-1499]
77. gpr1 ENSDARG00000101366 733 0.885 - - - - - - - - 0.885 G protein-coupled receptor 1 [Source:ZFIN;Acc:ZDB-GENE-091204-457]
78. tbp ENSDARG00000014994 1591 0.885 - - - - - - - - 0.885 TATA box binding protein [Source:ZFIN;Acc:ZDB-GENE-030616-563]
79. nrg1 ENSDARG00000104314 1081 0.885 - - - - - - - - 0.885 neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
80. greb1 ENSDARG00000070794 1741 0.884 - - - - - - - - 0.884 growth regulating estrogen receptor binding 1 [Source:ZFIN;Acc:ZDB-GENE-070112-332]
81. galnt6 ENSDARG00000014386 1126 0.883 - - - - - - - - 0.883 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) [Source:ZFIN;Acc:ZDB-GENE-040426-2272]
82. rac2 ENSDARG00000038010 5837 0.882 - - - - - - - - 0.882 Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
83. FUZ ENSDARG00000079730 821 0.882 - - - - - - - - 0.882 fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
84. mical1 ENSDARG00000011809 586 0.881 - - - - - - - - 0.881 microtubule associated monooxygenase, calponin and LIM domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081022-3]
85. pglyrp5 ENSDARG00000068382, ENSDARG00000112609 120 0.881 - - - - - - - - 0.881 peptidoglycan recognition protein 5 [Source:ZFIN;Acc:ZDB-GENE-050419-71]
86. si:ch211-232i5.1 ENSDARG00000078072 1337 0.881 - - - - - - - - 0.881 si:ch211-232i5.1 [Source:ZFIN;Acc:ZDB-GENE-070705-127]
87. rarab ENSDARG00000034893, ENSDARG00000111757 2151 0.88 - - - - - - - - 0.880 retinoic acid receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-980526-72]
88. calhm2 ENSDARG00000039482 138 0.88 - - - - - - - - 0.880 calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
89. CABZ01063402.1 CABZ01063402.1 64 0.88 - - - - - - - - 0.880
90. ecd ENSDARG00000022944, ENSDARG00000114710 273 0.88 - - - - - - - - 0.880 ecdysoneless homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6304]
91. ide ENSDARG00000075570 4331 0.879 - - - - - - - - 0.879 insulin-degrading enzyme [Source:ZFIN;Acc:ZDB-GENE-070410-85]
92. ptgs1 ENSDARG00000052148 2443 0.879 - - - - - - - - 0.879 prostaglandin-endoperoxide synthase 1 [Source:ZFIN;Acc:ZDB-GENE-020530-1]
93. KIF2A_1 ENSDARG00000043571 189 0.879 - - - - - - - - 0.879 kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
94. arl6 ENSDARG00000032056, ENSDARG00000113281 238 0.879 - - - - - - - - 0.879 ADP-ribosylation factor-like 6 [Source:ZFIN;Acc:ZDB-GENE-041219-2]
95. enpp6 ENSDARG00000040469 187 0.879 - - - - - - - - 0.879 ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:ZFIN;Acc:ZDB-GENE-031205-1]
96. cbsb ENSDARG00000010946 5779 0.878 - - - - - - - - 0.878 cystathionine-beta-synthase b [Source:ZFIN;Acc:ZDB-GENE-021030-3]
97. CT030712.1 ENSDARG00000044355 83 0.878 - - - - - - - - 0.878 uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
98. ubap2l ENSDARG00000063219 1147 0.878 - - - - - - - - 0.878 ubiquitin associated protein 2-like [Source:ZFIN;Acc:ZDB-GENE-060503-244]
99. per1b ENSDARG00000012499 320 0.878 - - - - - - - - 0.878 period circadian clock 1b [Source:ZFIN;Acc:ZDB-GENE-040419-1]
100. si:dkey-246e3.4 ENSDARG00000086390 50 0.878 - - - - - - - - 0.878 si:dkey-246e3.4 [Source:ZFIN;Acc:ZDB-GENE-130531-58]

There are 819 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA