Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for timm9

Gene Name Gene ID Reads Annotation
timm9 ENSDARG00000043865 2456 translocase of inner mitochondrial membrane 9 homolog [Source:ZFIN;Acc:ZDB-GENE-021206-14]










Genes with expression patterns similar to timm9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. timm9 ENSDARG00000043865 2456 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 translocase of inner mitochondrial membrane 9 homolog [Source:ZFIN;Acc:ZDB-GENE-021206-14]
2. atp5h 18018 2.467 0.751 0.888 - - - 0.828 - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
3. chrna1 ENSDARG00000009021 2931 2.412 0.794 0.855 - - - 0.763 - - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
4. mrpl12 ENSDARG00000038768 5539 2.317 0.732 0.804 - - - 0.781 - - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
5. txlnbb ENSDARG00000076241 6396 2.3 0.721 0.763 - - - 0.816 - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
6. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 2.282 - 0.780 - - - 0.778 0.724 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
7. celf2 ENSDARG00000002131, ENSDARG00000110267 15605 2.279 0.715 0.833 - - - - 0.731 - - cugbp, Elav-like family member 2 [Source:ZFIN;Acc:ZDB-GENE-030826-35]
8. nudt3a ENSDARG00000016256 2713 2.271 0.737 0.763 - - - - 0.771 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
9. MYOT ENSDARG00000076312 1791 2.264 0.701 0.835 - - - 0.728 - - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
10. nop58 ENSDARG00000104353 8497 2.238 0.716 0.786 - - - - 0.736 - - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
11. mrps34 ENSDARG00000057910 2007 2.23 0.702 - - - - 0.756 0.772 - - mitochondrial ribosomal protein S34 [Source:ZFIN;Acc:ZDB-GENE-041114-71]
12. aimp1 ENSDARG00000060036 5343 2.224 0.789 - - - - 0.732 0.703 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
13. apex1 ENSDARG00000045843 6345 2.216 0.700 0.808 - - - - 0.708 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
14. znf648 ENSDARG00000104823 1918 2.215 - 0.746 - - - 0.752 0.717 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
15. mrps18a ENSDARG00000024465 5187 2.21 0.705 - - - - 0.748 0.757 - - mitochondrial ribosomal protein S18A [Source:ZFIN;Acc:ZDB-GENE-041210-109]
16. vwde ENSDARG00000103443 5758 2.21 0.722 0.768 - - - 0.720 - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
17. PTPLA PTPLA 4044 2.188 0.703 0.734 - - - 0.751 - - -
18. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 2.17 0.704 0.742 - - - 0.724 - - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
19. kcnma1a ENSDARG00000079840 2584 2.166 - 0.709 - - - 0.749 0.708 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
20. fbxo8 ENSDARG00000007477 603 1.689 - - - - - 0.874 0.815 - - F-box protein 8 [Source:ZFIN;Acc:ZDB-GENE-060421-7091]
21. znf346 ENSDARG00000060695 3942 1.679 0.837 - - - - - 0.842 - - zinc finger protein 346 [Source:ZFIN;Acc:ZDB-GENE-070209-152]
22. MRPL21 ENSDARG00000003846 3244 1.645 0.814 0.831 - - - - - - - mitochondrial ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-061027-183]
23. pa2g4b ENSDARG00000070657 7999 1.64 - 0.868 - - - - 0.772 - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
24. gemin8 ENSDARG00000053496, ENSDARG00000115240 1214 1.64 - 0.871 - - - - 0.769 - - gem (nuclear organelle) associated protein 8 [Source:ZFIN;Acc:ZDB-GENE-041114-189]
25. samm50 ENSDARG00000045814 4511 1.634 - 0.863 - - - 0.771 - - - SAMM50 sorting and assembly machinery component [Source:ZFIN;Acc:ZDB-GENE-040426-806]
26. CU633479.5 ENSDARG00000114818 1815 1.634 - 0.800 - - - 0.834 - - -
27. MYOM3 2720 1.631 - 0.848 - - - 0.783 - - - myomesin 3, transcript variant X2
28. six1b ENSDARG00000026473 1908 1.629 - 0.832 - - - 0.797 - - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
29. mrps10 ENSDARG00000045913 1453 1.619 - 0.815 - - - - 0.804 - - mitochondrial ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040914-39]
30. mrps35 ENSDARG00000038456 1514 1.617 - 0.821 - - - - 0.796 - - mitochondrial ribosomal protein S35 [Source:ZFIN;Acc:ZDB-GENE-050809-131]
31. stip1 ENSDARG00000004906 7742 1.616 0.762 - - - - - 0.854 - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
32. naa50 ENSDARG00000027825, ENSDARG00000116858 3221 1.605 - - - - - 0.794 0.811 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-142]
33. rab5if ENSDARG00000074790 8807 1.603 - 0.870 - - - - 0.733 - - RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
34. pomp ENSDARG00000032296 4439 1.601 - 0.887 - - - - 0.714 - - proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
35. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.595 - 0.816 - - - - 0.779 - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
36. plecb ENSDARG00000021987 13621 1.592 0.721 0.871 - - - - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
37. psmc1b ENSDARG00000043561, ENSDARG00000112404 2148 1.592 - 0.808 - 0.784 - - - - - proteasome 26S subunit, ATPase 1b [Source:ZFIN;Acc:ZDB-GENE-040625-69]
38. myoz2a ENSDARG00000012311 1373 1.592 - 0.816 - - - 0.776 - - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
39. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.59 - 0.770 - - - 0.820 - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
40. atp5o 10343 1.586 - - - - - 0.800 0.786 - - ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
41. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.583 - 0.820 - - - - 0.763 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
42. rp42-pen rp42-pen 3395 1.582 - 0.807 - - - 0.775 - - -
43. mrpl38 ENSDARG00000039667 1145 1.582 - 0.833 - - - - 0.749 - - mitochondrial ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-040426-2373]
44. trap1 ENSDARG00000024317, ENSDARG00000114173 2189 1.578 - 0.808 - - - 0.770 - - - TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]
45. txn2 ENSDARG00000034777 4071 1.577 - 0.791 - - - - 0.786 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
46. ppp2r1a ppp2r1a 11291 1.573 - 0.721 - - - - 0.852 - -
47. tnnc1b ENSDARG00000037539 13945 1.572 - 0.747 - - - 0.825 - - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
48. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.569 - 0.823 - - - - 0.746 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
49. smyd2b ENSDARG00000005629 8181 1.568 - 0.811 - - - 0.757 - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
50. uqcrc2a ENSDARG00000014794 3949 1.567 - 0.811 - - - - 0.756 - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
51. cct5 ENSDARG00000045399 11572 1.566 0.765 0.801 - - - - - - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
52. asb2a asb2a 845 1.564 - 0.792 - - - 0.772 - - -
53. stau1 ENSDARG00000044182, ENSDARG00000115476 6121 1.561 - 0.740 - - - - 0.821 - - staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]
54. mrps15 ENSDARG00000109289 3258 1.56 - 0.767 - - - - 0.793 - - mitochondrial ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-040718-188]
55. sucla2 ENSDARG00000005359 5992 1.559 - 0.833 - - - 0.726 - - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
56. qars ENSDARG00000010316 2715 1.558 - 0.809 - - - - 0.749 - - glutaminyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1011]
57. MRPS17 ENSDARG00000054164 971 1.558 - 0.700 - - - 0.858 - - - mitochondrial ribosomal protein S17 [Source:ZFIN;Acc:ZDB-GENE-050522-390]
58. timm13 ENSDARG00000058297 4447 1.557 - 0.842 - - - 0.715 - - - translocase of inner mitochondrial membrane 13 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-167]
59. Sep-06 Sep-06 5465 1.551 - 0.744 - - - - 0.807 - -
60. lmo2 ENSDARG00000095019 1098 1.55 - 0.770 - - - - 0.780 - - LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
61. si:ch211-85n16.3 ENSDARG00000096346 1095 1.55 - 0.740 - - - - 0.810 - - si:ch211-85n16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-137]
62. ehd1b ENSDARG00000014793, ENSDARG00000110243, ENSDARG00000110919 2496 1.548 0.708 0.840 - - - - - - - EH-domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2069]
63. enah ENSDARG00000032049 1526 1.547 - 0.744 - - - 0.803 - - - enabled homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010323-11]
64. fitm1 ENSDARG00000056464 1759 1.547 0.770 0.777 - - - - - - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
65. hprt1 ENSDARG00000008884, ENSDARG00000117138 2486 1.543 - 0.807 - - - - 0.736 - - hypoxanthine phosphoribosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1918]
66. ube2g1b ENSDARG00000069527 5376 1.543 0.737 0.806 - - - - - - - ubiquitin-conjugating enzyme E2G 1b (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2939]
67. cox7c ENSDARG00000104537 12169 1.541 - - - - - 0.712 0.829 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
68. klhl40a ENSDARG00000039052 2537 1.54 - 0.761 - - - 0.779 - - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
69. slc25a12 ENSDARG00000102362 2773 1.538 - 0.784 - - - - 0.754 - - solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
70. papola ENSDARG00000009585 9567 1.538 - 0.834 - - - - 0.704 - - poly(A) polymerase alpha [Source:ZFIN;Acc:ZDB-GENE-030131-3507]
71. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 1.537 - 0.791 - - - - 0.746 - - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
72. pcmt ENSDARG00000015201 5132 1.537 - 0.834 - - - - 0.703 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
73. rnf175 ENSDARG00000037647 1233 1.534 - 0.764 - - - 0.770 - - - ring finger protein 175 [Source:ZFIN;Acc:ZDB-GENE-040426-1104]
74. cth ENSDARG00000074301 3860 1.533 0.703 0.830 - - - - - - - cystathionase (cystathionine gamma-lyase) [Source:ZFIN;Acc:ZDB-GENE-030131-774]
75. txnipb ENSDARG00000070000 2365 1.533 - 0.708 - - - 0.825 - - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
76. cilp ENSDARG00000053362 1429 1.532 - 0.805 - - - - 0.727 - - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
77. rpl37 ENSDARG00000034291, ENSDARG00000076360 13668 1.531 0.707 - - - - - 0.824 - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
78. C1QBP ENSDARG00000039887 11186 1.53 0.746 - - - - - 0.784 - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
79. grpel2 ENSDARG00000069421 5673 1.53 0.715 0.815 - - - - - - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
80. gstm gstm 4064 1.524 0.714 - - - - - 0.810 - -
81. lrrc20 ENSDARG00000105018 1970 1.523 - 0.768 - - - - 0.755 - - leucine rich repeat containing 20 [Source:ZFIN;Acc:ZDB-GENE-041114-49]
82. col4a2 ENSDARG00000104110 947 1.523 - - - - - 0.791 0.732 - - collagen, type IV, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070725-3]
83. timm8b ENSDARG00000055708 7291 1.521 - 0.799 - - - - 0.722 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
84. MRPL18 ENSDARG00000060199, ENSDARG00000110565, ENSDARG00000112114 1364 1.521 - - - - - 0.817 0.704 - - mitochondrial ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-061013-632]
85. lrpprc ENSDARG00000043970 3847 1.52 - 0.775 - - - - 0.745 - - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
86. mrps18b ENSDARG00000007065 2121 1.52 - 0.785 - - - - 0.735 - - mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]
87. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.519 0.725 - - - - - 0.794 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
88. zgc:158296 ENSDARG00000070923 3935 1.519 - 0.722 - - - 0.797 - - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
89. smtnl ENSDARG00000055632, ENSDARG00000109489 788 1.516 - 0.771 - - - - 0.745 - - smoothelin, like [Source:ZFIN;Acc:ZDB-GENE-040212-1]
90. ssb ENSDARG00000029252 3394 1.515 - 0.802 - - - - 0.713 - - Sjogren syndrome antigen B (autoantigen La) [Source:ZFIN;Acc:ZDB-GENE-030131-223]
91. DNAJA4 ENSDARG00000051762 5657 1.515 - 0.814 - - - 0.701 - - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
92. HYAL2 HYAL2 936 1.514 - 0.804 - - - - 0.710 - -
93. eif3jb ENSDARG00000053370 1776 1.514 0.714 0.800 - - - - - - - eukaryotic translation initiation factor 3, subunit Jb [Source:ZFIN;Acc:ZDB-GENE-040426-2900]
94. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 7566 1.513 0.774 0.739 - - - - - - - prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
95. snrpe ENSDARG00000033175 7462 1.512 - 0.779 - - - - 0.733 - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
96. mrpl9 ENSDARG00000063249 783 1.511 - 0.757 - - - - 0.754 - - mitochondrial ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-070717-4]
97. tuba1b ENSDARG00000045367 8485 1.511 - 0.791 - - - - 0.720 - - tubulin, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030822-1]
98. adrm1 ENSDARG00000058560, ENSDARG00000113912 1728 1.509 - 0.727 - - - - 0.782 - - adhesion regulating molecule 1 [Source:ZFIN;Acc:ZDB-GENE-040426-905]
99. ryr3 ENSDARG00000071331 6795 1.508 - 0.743 - - - 0.765 - - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
100. atp5e 14858 1.508 0.702 - - - - - 0.806 - - ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit

There are 1228 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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