Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for timm50

Gene Name Gene ID Reads Annotation
timm50 ENSDARG00000031098, ENSDARG00000109900 988 translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1618]










Genes with expression patterns similar to timm50

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. timm50 ENSDARG00000031098, ENSDARG00000109900 988 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1618]
2. fam204a ENSDARG00000039699, ENSDARG00000114877 1178 1.917 - - - 0.999 - 0.918 - - - family with sequence similarity 204, member A [Source:ZFIN;Acc:ZDB-GENE-040718-271]
3. ftsjd1 ftsjd1 137 1.736 - - - - - 0.925 - 0.811 -
4. polr3a ENSDARG00000102569 1072 1.731 - 0.786 - - - 0.945 - - - polymerase (RNA) III (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-050208-103]
5. drap1 ENSDARG00000041203 6749 1.728 - 0.735 - 0.993 - - - - - DR1-associated protein 1 (negative cofactor 2 alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-400]
6. kcnk13a ENSDARG00000008212 136 1.713 - - - - - 0.915 - 0.798 - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
7. bms1l bms1l 555 1.689 - 0.798 - - - 0.891 - - -
8. CORO1C CORO1C 5554 1.682 - 0.787 - 0.895 - - - - -
9. ppp4r2b ENSDARG00000053447 2506 1.644 - 0.777 - - - - 0.867 - - protein phosphatase 4, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3008]
10. bmp6 ENSDARG00000015686 211 1.635 - - - - - 0.915 - 0.720 - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
11. pcf11 ENSDARG00000044625, ENSDARG00000114082 1885 1.622 - - - - - 0.838 0.784 - - PCF11, cleavage and polyadenylation factor subunit [Source:ZFIN;Acc:ZDB-GENE-041114-175]
12. bag5 ENSDARG00000017316 195 1.598 - - - - - 0.893 0.705 - - BCL2 associated athanogene 5 [Source:ZFIN;Acc:ZDB-GENE-050913-58]
13. cks2 ENSDARG00000071410, ENSDARG00000116198 966 1.596 - 0.801 - - - - 0.795 - - CDC28 protein kinase regulatory subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050208-508]
14. CABZ01115256.1 CABZ01115256.1 683 1.592 - - - - - 0.800 - 0.792 -
15. zgc:113279 ENSDARG00000099533 156 1.59 - - - - - 0.858 0.732 - - zgc:113279 [Source:ZFIN;Acc:ZDB-GENE-050522-529]
16. si:ch211-191d2.2 ENSDARG00000090836 316 1.582 0.757 - - - - - - 0.825 - si:ch211-191d2.2 [Source:ZFIN;Acc:ZDB-GENE-110407-3]
17. cnot10 ENSDARG00000058528 478 1.568 - - - - - 0.858 0.710 - - CCR4-NOT transcription complex, subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060929-368]
18. ccdc94 1417 1.564 - - - - - 0.722 0.842 - - coiled-coil domain containing 94
19. thraa ENSDARG00000000151 148 1.564 - - - - - 0.824 0.740 - - thyroid hormone receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-990415-263]
20. tmprss13a ENSDARG00000100969 84 1.556 - - - - - 0.798 - 0.758 - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
21. jmjd7 ENSDARG00000035546 222 1.542 - - - - - 0.766 - 0.776 - jumonji domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-050417-86]
22. tmem41b ENSDARG00000080006 1060 1.542 - - - - - - 0.755 0.787 - transmembrane protein 41B [Source:ZFIN;Acc:ZDB-GENE-061215-138]
23. CELA1_1 CELA1_1 104 1.535 - - - - - 0.740 - 0.795 -
24. ccdc85b ENSDARG00000061543 1309 1.529 - 0.739 - - - - - 0.790 - coiled-coil domain containing 85B [Source:ZFIN;Acc:ZDB-GENE-060130-56]
25. cbwd ENSDARG00000004318, ENSDARG00000111371 626 1.527 0.748 - - - - - 0.779 - - COBW domain containing [Source:ZFIN;Acc:ZDB-GENE-040426-2388]
26. arhgap24 ENSDARG00000100973 1105 1.527 - 0.711 - - - - 0.816 - - Rho GTPase activating protein 24 [Source:ZFIN;Acc:ZDB-GENE-091118-20]
27. GRAMD4 GRAMD4 1967 1.522 - - - - - 0.717 0.805 - -
28. sh3rf1 ENSDARG00000070470 1463 1.52 - 0.722 - - - - 0.798 - - SH3 domain containing ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6288]
29. kat2b ENSDARG00000062634 276 1.515 - - - - - - 0.715 0.800 - K(lysine) acetyltransferase 2B [Source:ZFIN;Acc:ZDB-GENE-060503-207]
30. exd2 ENSDARG00000016117 342 1.514 - 0.720 - - - - - 0.794 - exonuclease 3'-5' domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6387]
31. mmadhc ENSDARG00000005870 1298 1.513 0.750 - - - - 0.763 - - - methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-040704-50]
32. spoplb ENSDARG00000003974 887 1.513 - 0.720 - - - - 0.793 - - speckle-type POZ protein-like b [Source:ZFIN;Acc:ZDB-GENE-061103-277]
33. cdc5l ENSDARG00000043797 985 1.507 - 0.769 - - - - 0.738 - - CDC5 cell division cycle 5-like (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-040426-821]
34. mrpl12 ENSDARG00000038768 5539 1.507 0.751 0.756 - - - - - - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
35. nol7 ENSDARG00000075795 1559 1.504 - 0.712 - - - - 0.792 - - nucleolar protein 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9100]
36. commd4 ENSDARG00000061946 3281 1.502 0.724 - - - - 0.778 - - - COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
37. KIF20B KIF20B 800 1.501 - - - - - - 0.714 0.787 -
38. sim1a ENSDARG00000023316 190 1.497 0.725 - - - - - - 0.772 - SIM bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-020829-1]
39. PEG3 PEG3 644 1.494 - - - - - 0.737 0.757 - -
40. pax3a ENSDARG00000010192 626 1.492 - 0.755 - - - - - 0.737 - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
41. pip5k1bb ENSDARG00000006508 2812 1.492 - - - - - 0.715 - 0.777 - phosphatidylinositol-4-phosphate 5-kinase, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-040912-141]
42. rbm38 ENSDARG00000058818 647 1.473 - - - - - 0.757 0.716 - - RNA binding motif protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-5923]
43. nom1 ENSDARG00000060027, ENSDARG00000112720 831 1.464 0.715 - - - - - 0.749 - - nucleolar protein with MIF4G domain 1 [Source:ZFIN;Acc:ZDB-GENE-060503-321]
44. C25H7orf60 C25H7orf60 699 1.461 - - - - - 0.730 0.731 - -
45. ubr3 ENSDARG00000042508 738 1.459 - - - - - 0.731 0.728 - - ubiquitin protein ligase E3 component n-recognin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1473]
46. arhgef4 ENSDARG00000012914 1464 1.457 - 0.756 - - - - 0.701 - - Rho guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-575]
47. osgep ENSDARG00000045846 738 1.456 - 0.717 - - - - - 0.739 - O-sialoglycoprotein endopeptidase [Source:ZFIN;Acc:ZDB-GENE-030131-7880]
48. SLC12A6 SLC12A6 883 1.452 - - - - - 0.720 - 0.732 -
49. usp33 ENSDARG00000016163 651 1.451 - - - - - 0.736 0.715 - - ubiquitin specific peptidase 33 [Source:ZFIN;Acc:ZDB-GENE-040426-2323]
50. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 1.448 - 0.732 - - - - 0.716 - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
51. DFNA5 DFNA5 201 1.439 - - - - - 0.720 0.719 - -
52. CT956064.4 CT956064.4 541 1.43 - 0.721 - - - 0.709 - - -
53. kat7 kat7 642 1.421 - - - - - 0.709 0.712 - -
54. ccar1 ENSDARG00000074759, ENSDARG00000114899 1329 0.999 - - - 0.999 - - - - - cell division cycle and apoptosis regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-146]
55. gli2b ENSDARG00000020884 1468 0.999 - - - 0.999 - - - - - GLI family zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-050523-1]
56. zgc:154055 ENSDARG00000103924 452 0.999 - - - 0.999 - - - - - zgc:154055 [Source:ZFIN;Acc:ZDB-GENE-060929-612]
57. mphosph10 ENSDARG00000012495 1679 0.999 - - - 0.999 - - - - - M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-2146]
58. slc16a9b ENSDARG00000104687 826 0.999 - - - 0.999 - - - - - solute carrier family 16, member 9b [Source:ZFIN;Acc:ZDB-GENE-040801-69]
59. DUSP28 ENSDARG00000059695 1135 0.999 - - - 0.999 - - - - - dual specificity phosphatase 28 [Source:ZFIN;Acc:ZDB-GENE-131127-257]
60. C5H9orf41 C5H9orf41 789 0.999 - - - 0.999 - - - - -
61. OLFML2A ENSDARG00000005648 1658 0.999 - - - 0.999 - - - - - olfactomedin-like 2A [Source:ZFIN;Acc:ZDB-GENE-081105-107]
62. zfand5b ENSDARG00000002271 4145 0.999 - - - 0.999 - - - - - zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
63. PLD5 PLD5 496 0.999 - - - 0.999 - - - - -
64. pcnxl2 610 0.999 - - - 0.999 - - - - - pecanex-like 2 (Drosophila), transcript variant X2
65. si:ch211-152p11.4 ENSDARG00000079705 2341 0.998 - - - 0.998 - - - - - si:ch211-152p11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-764]
66. kcnk1a ENSDARG00000045067 743 0.998 - - - 0.998 - - - - - potassium channel, subfamily K, member 1a [Source:ZFIN;Acc:ZDB-GENE-070620-26]
67. fat3a ENSDARG00000033840 902 0.998 - - - 0.998 - - - - - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
68. tspan18b ENSDARG00000015015 1433 0.998 - - - 0.998 - - - - - tetraspanin 18b [Source:ZFIN;Acc:ZDB-GENE-040718-137]
69. ephb4b ENSDARG00000027112 633 0.998 - - - 0.998 - - - - - eph receptor B4b [Source:ZFIN;Acc:ZDB-GENE-990415-65]
70. epha4l ENSDARG00000010767 1184 0.998 - - - 0.998 - - - - - eph receptor A4, like [Source:ZFIN;Acc:ZDB-GENE-990415-61]
71. slc1a5 ENSDARG00000099186 7580 0.998 - - - 0.998 - - - - - solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
72. fzd10 ENSDARG00000068213 1364 0.998 - - - 0.998 - - - - - frizzled class receptor 10 [Source:ZFIN;Acc:ZDB-GENE-990415-220]
73. ankra2 ENSDARG00000035399, ENSDARG00000111289 1303 0.998 - - - 0.998 - - - - - ankyrin repeat, family A (RFXANK-like), 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2141]
74. dip2ba ENSDARG00000005350, ENSDARG00000111011, ENSDARG00000111214 1640 0.998 - - - 0.998 - - - - - disco-interacting protein 2 homolog Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2305]
75. SNORA38 SNORA38 574 0.997 - - - 0.997 - - - - -
76. KRT23 KRT23 1443 0.997 - - - 0.997 - - - - -
77. hopx ENSDARG00000089368 2342 0.997 - - - 0.997 - - - - - HOP homeobox [Source:ZFIN;Acc:ZDB-GENE-031016-2]
78. stip1 ENSDARG00000004906 7742 0.997 - - - 0.997 - - - - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
79. rab22a ENSDARG00000015807, ENSDARG00000114826 1627 0.996 - - - 0.996 - - - - - RAB22A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-161]
80. CU633999.1 ENSDARG00000098197 2880 0.996 - - - 0.996 - - - - -
81. lpp ENSDARG00000023578 3581 0.996 - - - 0.996 - - - - - LIM domain containing preferred translocation partner in lipoma [Source:ZFIN;Acc:ZDB-GENE-040426-918]
82. ccdc25 ENSDARG00000021753 3837 0.996 - - - 0.996 - - - - - coiled-coil domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1389]
83. slc24a4a ENSDARG00000015425 1464 0.996 - - - 0.996 - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-050417-291]
84. chtopa ENSDARG00000057234 3287 0.995 - - - 0.995 - - - - - chromatin target of PRMT1a [Source:ZFIN;Acc:ZDB-GENE-030131-210]
85. exoc6 ENSDARG00000020521 1533 0.995 - - - 0.995 - - - - - exocyst complex component 6 [Source:ZFIN;Acc:ZDB-GENE-040426-2511]
86. chmp2bb ENSDARG00000002190 4629 0.995 - - - 0.995 - - - - - charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
87. ptbp2b ENSDARG00000015901 2458 0.994 - - - 0.994 - - - - - polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
88. pcca ENSDARG00000028982, ENSDARG00000110281 3212 0.994 - - - 0.994 - - - - - propionyl-CoA carboxylase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-040718-246]
89. nup155 ENSDARG00000001777 3417 0.993 - - - 0.993 - - - - - nucleoporin 155 [Source:ZFIN;Acc:ZDB-GENE-040426-711]
90. yaf2 ENSDARG00000015966 1905 0.993 - - - 0.993 - - - - - YY1 associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-115]
91. hrsp12 3981 0.993 - - - 0.993 - - - - - heat-responsive protein 12, transcript variant 1
92. rab18b ENSDARG00000098344 1154 0.993 - - - 0.993 - - - - - RAB18B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040801-185]
93. aldh4a1 ENSDARG00000038207 4639 0.993 - - - 0.993 - - - - - aldehyde dehydrogenase 4 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1179]
94. sdhdb ENSDARG00000030139 9761 0.992 - - - 0.992 - - - - - succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
95. phax ENSDARG00000044298 2302 0.992 - - - 0.992 - - - - - phosphorylated adaptor for RNA export [Source:ZFIN;Acc:ZDB-GENE-040822-42]
96. epha4a ENSDARG00000054454 1501 0.991 - - - 0.991 - - - - - eph receptor A4a [Source:ZFIN;Acc:ZDB-GENE-001207-7]
97. bet1 ENSDARG00000034885, ENSDARG00000113480 3627 0.991 - - - 0.991 - - - - - Bet1 golgi vesicular membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-040625-3]
98. man1b1 man1b1 3294 0.99 - - - 0.990 - - - - -
99. atp2b3b ENSDARG00000023445 1424 0.99 - - - 0.990 - - - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
100. arf6b ENSDARG00000052928 4585 0.989 - - - 0.989 - - - - - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]

There are 1363 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA