Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ticrr

Gene Name Gene ID Reads Annotation
ticrr ENSDARG00000045605 739 TopBP1-interacting, checkpoint, and replication regulator [Source:ZFIN;Acc:ZDB-GENE-040728-1]










Genes with expression patterns similar to ticrr

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ticrr ENSDARG00000045605 739 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TopBP1-interacting, checkpoint, and replication regulator [Source:ZFIN;Acc:ZDB-GENE-040728-1]
2. mxd3 ENSDARG00000098350 3040 2.336 - - - - - 0.892 0.740 - 0.704 MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
3. pop5 ENSDARG00000053452 1347 2.167 0.704 - - - - 0.755 0.708 - - POP5 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050320-123]
4. mafk ENSDARG00000100947 1460 1.837 - - - - 0.994 0.843 - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K [Source:ZFIN;Acc:ZDB-GENE-040624-9]
5. CABZ01027552.1 CABZ01027552.1 760 1.819 - - - - 0.998 0.821 - - -
6. spcs1 ENSDARG00000059298 5327 1.799 - - - - 0.982 0.817 - - - signal peptidase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050809-130]
7. C6H2orf40 C6H2orf40 4224 1.785 - - - - 0.983 0.802 - - -
8. CABZ01055343.2 CABZ01055343.2 10312 1.741 - - - - 0.989 0.752 - - -
9. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.728 - - - - 0.990 0.738 - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
10. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.712 - 0.722 - - 0.990 - - - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
11. si:dkeyp-110g5.4 ENSDARG00000092482 249 1.658 - - - - - 0.829 0.829 - - si:dkeyp-110g5.4 [Source:ZFIN;Acc:ZDB-GENE-081104-452]
12. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.654 - - - - 0.945 0.709 - - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
13. dnaja2 ENSDARG00000104066 11946 1.652 - - - - 0.780 0.872 - - - DnaJ (Hsp40) homolog, subfamily A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2884]
14. CR847496.2 ENSDARG00000116070 802 1.613 - 0.741 - - - 0.872 - - - platelet derived growth factor c [Source:NCBI gene;Acc:560564]
15. C2H6orf52 C2H6orf52 2847 1.586 - 0.781 - - - 0.805 - - -
16. si:ch211-86h15.1 ENSDARG00000074098 354 1.583 - - - - - 0.855 0.728 - - si:ch211-86h15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-38]
17. mesdc2 776 1.579 - 0.703 - - - 0.876 - - - mesoderm development candidate 2, transcript variant X2
18. st5 ENSDARG00000037363, ENSDARG00000112276 1797 1.578 - 0.805 - - - 0.773 - - - suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
19. utp6 ENSDARG00000098433, ENSDARG00000114878, ENSDARG00000116788 1262 1.573 - 0.749 - - - 0.824 - - - UTP6, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-769]
20. cylda ENSDARG00000060058 768 1.56 - - - - - 0.775 0.785 - - cylindromatosis (turban tumor syndrome), a [Source:ZFIN;Acc:ZDB-GENE-061108-2]
21. klhl11 ENSDARG00000045130 800 1.555 - 0.748 - - - 0.807 - - - kelch-like family member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5524]
22. ppifa ENSDARG00000007409 185 1.551 0.725 - - - - - 0.826 - - peptidylprolyl isomerase Fa [Source:ZFIN;Acc:ZDB-GENE-040912-52]
23. ubr5 ENSDARG00000018192 9267 1.516 - 0.717 - - 0.799 - - - - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
24. plekha3 ENSDARG00000056601 213 1.499 0.720 - - - - - 0.779 - - pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1252]
25. mrpl10 ENSDARG00000045091, ENSDARG00000112205 1187 1.48 - - - - - 0.720 0.760 - - mitochondrial ribosomal protein L10 [Source:ZFIN;Acc:ZDB-GENE-050320-19]
26. TRIP10 TRIP10 1079 1.468 - 0.759 - - - 0.709 - - -
27. gpd2 ENSDARG00000062430 185 1.461 0.732 - - - - - 0.729 - - glycerol-3-phosphate dehydrogenase 2 (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-030131-4869]
28. im:7154842 im:7154842 434 1.457 - - - - - 0.745 0.712 - -
29. mrps2 ENSDARG00000103198 2410 1.431 - 0.704 - - - - 0.727 - - mitochondrial ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-070112-992]
30. LRRC8A LRRC8A 406 1.427 - 0.712 - - - - 0.715 - -
31. gstm gstm 4064 1.424 - - - - - 0.710 0.714 - -
32. si:dkey-251i10.2 ENSDARG00000093957 4424 0.998 - - - - 0.998 - - - - si:dkey-251i10.2 [Source:ZFIN;Acc:ZDB-GENE-050506-102]
33. il12rb2l ENSDARG00000074850 407 0.998 - - - - 0.998 - - - - interleukin 12 receptor, beta 2a, like [Source:ZFIN;Acc:ZDB-GENE-080107-6]
34. atp1b4 ENSDARG00000053262 1337 0.998 - - - - 0.998 - - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
35. otx2 766 0.998 - - - - 0.998 - - - - orthodenticle homeobox 2, transcript variant X2
36. armc9 ENSDARG00000087299 459 0.998 - - - - 0.998 - - - - armadillo repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-100922-67]
37. tarsl2 ENSDARG00000092774 505 0.998 - - - - 0.998 - - - - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
38. SNORA70 SNORA70 511 0.998 - - - - 0.998 - - - -
39. USP2_1 USP2_1 544 0.998 - - - - 0.998 - - - -
40. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 0.998 - - - - 0.998 - - - - NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
41. sptlc1 ENSDARG00000042995, ENSDARG00000112519 1291 0.997 - - - - 0.997 - - - - serine palmitoyltransferase, long chain base subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050522-61]
42. adcyap1b ENSDARG00000027740 1539 0.997 - - - - 0.997 - - - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
43. ccdc53 982 0.997 - - - - 0.997 - - - - coiled-coil domain containing 53
44. nsl1 ENSDARG00000024471 1269 0.997 - - - - 0.997 - - - - NSL1, MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-041014-362]
45. rbpja ENSDARG00000003398 1309 0.997 - - - - 0.997 - - - - recombination signal binding protein for immunoglobulin kappa J region a [Source:ZFIN;Acc:ZDB-GENE-031117-1]
46. stx6 ENSDARG00000042742, ENSDARG00000115635 1208 0.997 - - - - 0.997 - - - - syntaxin 6 [Source:ZFIN;Acc:ZDB-GENE-030131-858]
47. sh3bp5a ENSDARG00000100529 642 0.997 - - - - 0.997 - - - - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
48. znf280d ENSDARG00000077013 1387 0.996 - - - - 0.996 - - - - zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
49. cdk5 ENSDARG00000056683 1998 0.996 - - - - 0.996 - - - - cyclin-dependent kinase 5 [Source:ZFIN;Acc:ZDB-GENE-010131-2]
50. wu:fc26g07 wu:fc26g07 1165 0.996 - - - - 0.996 - - - -
51. rnaseh1 ENSDARG00000042571 922 0.996 - - - - 0.996 - - - - ribonuclease H1 [Source:ZFIN;Acc:ZDB-GENE-040718-407]
52. slc20a1b ENSDARG00000010641 2564 0.996 - - - - 0.996 - - - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
53. cdkn1a ENSDARG00000076554 591 0.996 - - - - 0.996 - - - - cyclin-dependent kinase inhibitor 1A [Source:ZFIN;Acc:ZDB-GENE-070705-7]
54. zgc:110699 ENSDARG00000017474 381 0.996 - - - - 0.996 - - - - zgc:110699 [Source:ZFIN;Acc:ZDB-GENE-050522-487]
55. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 0.996 - - - - 0.996 - - - - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
56. clasp1a ENSDARG00000010280 1158 0.996 - - - - 0.996 - - - - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
57. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 0.996 - - - - 0.996 - - - - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
58. gab1 ENSDARG00000037018 1489 0.996 - - - - 0.996 - - - - GRB2-associated binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2674]
59. WIPF3 WIPF3 804 0.996 - - - - 0.996 - - - -
60. itm2ca ENSDARG00000043448 1265 0.996 - - - - 0.996 - - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
61. cog4 ENSDARG00000054264 785 0.995 - - - - 0.995 - - - - component of oligomeric golgi complex 4 [Source:ZFIN;Acc:ZDB-GENE-060312-33]
62. SLC7A5 ENSDARG00000099265, ENSDARG00000115845 2319 0.995 - - - - 0.995 - - - - solute carrier family 7 (amino acid transporter light chain, L system), member 5 [Source:ZFIN;Acc:ZDB-GENE-080818-4]
63. ESCO1 ENSDARG00000077057 1112 0.995 - - - - 0.995 - - - - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-130530-818]
64. esf1 ENSDARG00000008740 1206 0.995 - - - - 0.995 - - - - ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4917]
65. eif3d ENSDARG00000021257 1524 0.995 - - - - 0.995 - - - - eukaryotic translation initiation factor 3, subunit D [Source:ZFIN;Acc:ZDB-GENE-030131-8442]
66. ttc13 ENSDARG00000063242 1360 0.995 - - - - 0.995 - - - - tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
67. usp40 ENSDARG00000071197 825 0.995 - - - - 0.995 - - - - ubiquitin specific peptidase 40 [Source:ZFIN;Acc:ZDB-GENE-060518-5]
68. upb1 ENSDARG00000011521, ENSDARG00000116790 920 0.995 - - - - 0.995 - - - - ureidopropionase, beta [Source:ZFIN;Acc:ZDB-GENE-030131-1380]
69. pik3r3a ENSDARG00000103038 1132 0.995 - - - - 0.995 - - - - phosphoinositide-3-kinase, regulatory subunit 3a (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-1978]
70. si:ch73-86n18.1 ENSDARG00000056379, ENSDARG00000112771 2391 0.995 - - - - 0.995 - - - - si:ch73-86n18.1 [Source:ZFIN;Acc:ZDB-GENE-141216-19]
71. si:ch211-197h24.6 ENSDARG00000091631 1933 0.995 - - - - 0.995 - - - - si:ch211-197h24.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1361]
72. sap130b ENSDARG00000079352 1468 0.995 - - - - 0.995 - - - - Sin3A-associated protein b [Source:ZFIN;Acc:ZDB-GENE-070912-570]
73. mtor ENSDARG00000053196 2156 0.995 - - - - 0.995 - - - - mechanistic target of rapamycin kinase [Source:ZFIN;Acc:ZDB-GENE-030131-2974]
74. arhgap11a ENSDARG00000100019 1642 0.995 - - - - 0.995 - - - - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
75. USP24 ENSDARG00000059925 1294 0.995 - - - - 0.995 - - - - ubiquitin specific peptidase 24 [Source:ZFIN;Acc:ZDB-GENE-030131-4356]
76. thoc7 ENSDARG00000015394 3824 0.995 - - - - 0.995 - - - - THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
77. pitrm1 ENSDARG00000038563, ENSDARG00000115745 1321 0.994 - - - - 0.994 - - - - pitrilysin metallopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2876]
78. ipo4 ENSDARG00000041493 1578 0.994 - - - - 0.994 - - - - importin 4 [Source:ZFIN;Acc:ZDB-GENE-041014-307]
79. col11a1b ENSDARG00000009014 9998 0.994 - - - - 0.994 - - - - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
80. kdm6bb ENSDARG00000056929 4807 0.994 - - - - 0.994 - - - - lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
81. prickle3 ENSDARG00000073996 840 0.994 - - - - 0.994 - - - - prickle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-081105-86]
82. nmt1a ENSDARG00000052966 5918 0.993 - - - - 0.993 - - - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
83. prrc1 ENSDARG00000044304 1567 0.993 - - - - 0.993 - - - - proline-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-041024-9]
84. sf3b3_1 ENSDARG00000103553 1191 0.993 - - - - 0.993 - - - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
85. cuedc1b ENSDARG00000054748 1638 0.993 - - - - 0.993 - - - - CUE domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070424-29]
86. sh3bgrl3 ENSDARG00000098075 3071 0.993 - - - - 0.993 - - - - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
87. ANKRD50 ENSDARG00000045666 1756 0.993 - - - - 0.993 - - - - ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]
88. AP3B1 2363 0.993 - - - - 0.993 - - - - adaptor related protein complex 3 beta 1 subunit
89. clgn ENSDARG00000009315 993 0.992 - - - - 0.992 - - - - calmegin [Source:ZFIN;Acc:ZDB-GENE-060929-708]
90. pik3cb ENSDARG00000075253 2075 0.992 - - - - 0.992 - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-1904]
91. sox4a ENSDARG00000004588, ENSDARG00000096389 2213 0.992 - - - - 0.992 - - - - SRY (sex determining region Y)-box 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8290]
92. arfgef2 ENSDARG00000074702 1593 0.992 - - - - 0.992 - - - - ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) [Source:ZFIN;Acc:ZDB-GENE-090312-50]
93. mrgbp ENSDARG00000028894, ENSDARG00000110790 1316 0.992 - - - - 0.992 - - - - MRG/MORF4L binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1698]
94. bnip4 ENSDARG00000022832, ENSDARG00000117207 3100 0.991 - - - - 0.991 - - - - BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]
95. pcif1 ENSDARG00000099084 2851 0.991 - - - - 0.991 - - - - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
96. CT955967.1 ENSDARG00000099956 2885 0.991 - - - - 0.991 - - - -
97. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 0.991 - - - - 0.991 - - - - F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
98. ARHGEF5 2727 0.991 - - - - 0.991 - - - - Rho guanine nucleotide exchange factor (GEF) 5, transcript variant X2
99. mrpl1 ENSDARG00000054606, ENSDARG00000114027 1457 0.991 - - - - 0.991 - - - - mitochondrial ribosomal protein L1 [Source:ZFIN;Acc:ZDB-GENE-060526-311]
100. mrpl11 ENSDARG00000013075 2927 0.991 - - - - 0.991 - - - - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]

There are 1086 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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