Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tia1

Gene Name Gene ID Reads Annotation
tia1 ENSDARG00000052536, ENSDARG00000114478 4392 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]










Genes with expression patterns similar to tia1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
2. TAF15 ENSDARG00000070019 5102 4.676 - - 0.823 0.702 0.774 0.716 - 0.806 0.855 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
3. mxi1 ENSDARG00000040884, ENSDARG00000111950 3239 4.665 0.805 - 0.767 0.704 0.715 - 0.818 - 0.856 max interactor 1, dimerization protein [Source:ZFIN;Acc:ZDB-GENE-990415-151]
4. smarce1 ENSDARG00000016871 9628 4.052 0.789 0.987 - 0.743 - - 0.777 0.756 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
5. nbeaa ENSDARG00000070080 862 3.731 - - - 0.707 0.719 - 0.729 0.707 0.869 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
6. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 3.407 - - - 0.860 - - 0.829 0.813 0.905 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
7. srsf6b ENSDARG00000016783 9926 3.235 0.701 0.969 - 0.755 0.810 - - - - serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
8. nkain1 ENSDARG00000006859 1961 3.231 - 0.994 0.715 - - - 0.717 - 0.805 sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
9. rtca ENSDARG00000002215 3558 3.168 - - - - 0.706 - 0.814 0.736 0.912 RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
10. smarcd1 ENSDARG00000019004 6028 3.165 0.795 - - 0.802 0.747 - 0.821 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
11. tmpob ENSDARG00000022978 8121 3.157 - - 0.822 0.740 - - 0.785 - 0.810 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
12. ZFHX3 ENSDARG00000103057 7759 3.141 - - 0.757 0.815 - - 0.795 0.774 - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
13. tuba1c ENSDARG00000055216 8384 3.136 - - - - 0.758 - 0.793 0.722 0.863 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
14. parp1 ENSDARG00000019529 6787 3.108 - - 0.829 - 0.706 - - 0.720 0.853 poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
15. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 3.105 - - 0.829 0.787 - - 0.745 0.744 - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
16. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 3.104 - - 0.764 0.732 - - 0.735 - 0.873 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
17. mex3b ENSDARG00000058369 1867 3.088 - - 0.718 - 0.746 - 0.872 0.752 - mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
18. msl2a ENSDARG00000038909 1357 3.074 - - - - 0.811 - 0.701 0.724 0.838 male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
19. arnt2 ENSDARG00000103697 5731 3.065 - - 0.749 - - - 0.758 0.730 0.828 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
20. carm1 ENSDARG00000018698 5599 3.062 - - - 0.741 0.810 0.749 - - 0.762 coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
21. ilf2 ENSDARG00000014591 14543 3.059 - - 0.748 0.715 - - - 0.731 0.865 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
22. hnrnpr ENSDARG00000014569 3423 3.059 - - - - 0.730 0.721 0.787 0.821 - heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]
23. mta2 ENSDARG00000013031 2932 3.053 - - - 0.754 - - 0.748 0.850 0.701 metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
24. cdk6 ENSDARG00000070228 1778 3.04 - - 0.714 - - - 0.755 0.746 0.825 cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
25. rbm15b ENSDARG00000078966, ENSDARG00000112832 1888 3.015 - - 0.816 0.708 - - 0.765 - 0.726 RNA binding motif protein 15B [Source:ZFIN;Acc:ZDB-GENE-080204-91]
26. hnrpl 6412 3.012 - - 0.715 - - 0.739 0.723 - 0.835 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
27. ncapd2 ENSDARG00000005058 2819 3.008 - - 0.767 - - 0.703 0.783 - 0.755 non-SMC condensin I complex, subunit D2 [Source:ZFIN;Acc:ZDB-GENE-050506-59]
28. hnrnpa1 hnrnpa1 1302 2.938 - - 0.715 - 0.715 - 0.791 - 0.717
29. ZNF281 ZNF281 1946 2.916 - - 0.764 0.714 0.711 - 0.727 - -
30. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 2.661 - 0.992 0.835 - - - - 0.834 - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
31. whsc1l1 8544 2.573 - 0.986 - 0.766 - - - - 0.821 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
32. hnrnpub ENSDARG00000004735 16496 2.566 - - - 0.805 - - 0.842 - 0.919 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
33. top2a ENSDARG00000024488 4273 2.548 - 0.986 - - - 0.764 - - 0.798 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
34. marcksa ENSDARG00000004049 2518 2.538 - - - - - - 0.813 0.834 0.891 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
35. HNRNPA2B1 HNRNPA2B1 14997 2.513 - 0.969 - 0.737 - - 0.807 - -
36. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 2.511 - - - - - - 0.787 0.897 0.827 contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
37. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.507 - - - 0.791 - - 0.844 - 0.872 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
38. suv39h1b ENSDARG00000055753 1540 2.506 - 0.993 - - - - - 0.783 0.730 suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]
39. st18 663 2.474 - - - - - - 0.837 0.855 0.782 suppression of tumorigenicity 18, zinc finger
40. CR936437.1 CR936437.1 6465 2.47 - - 0.841 - - - 0.773 - 0.856
41. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.467 - - - - - - 0.844 0.708 0.915 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
42. rap2ip rap2ip 681 2.462 - - - - - - 0.809 0.856 0.797
43. acin1a ENSDARG00000054290 14023 2.462 - 0.960 - 0.796 - - 0.706 - - apoptotic chromatin condensation inducer 1a [Source:ZFIN;Acc:ZDB-GENE-030616-583]
44. top1l ENSDARG00000070545 40529 2.459 - - - 0.884 - - 0.787 0.788 - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
45. tmpoa ENSDARG00000007315 3638 2.457 - 0.994 - 0.755 - - 0.708 - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
46. cks1b ENSDARG00000007971 2739 2.455 0.712 0.994 - - - - - - 0.749 CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
47. her13 ENSDARG00000007097 2000 2.453 - - - - - - 0.824 0.869 0.760 hairy-related 13 [Source:ZFIN;Acc:ZDB-GENE-050228-1]
48. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 2.447 - - 0.808 - - - - 0.796 0.843 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
49. pou3f2a ENSDARG00000070220 817 2.445 - - - - 0.776 - - 0.838 0.831 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
50. her4.3 ENSDARG00000070770 613 2.433 - - - - - - 0.839 0.808 0.786 hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
51. dlb ENSDARG00000004232 5120 2.432 - - - 0.823 0.763 - - - 0.846 deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
52. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 2.432 - - - - - - 0.776 0.855 0.801 cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
53. pcdh19 ENSDARG00000034344 2378 2.43 - - - - 0.752 - - 0.815 0.863 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
54. arhgef2 ENSDARG00000075819 2173 2.408 - - 0.757 - - - - 0.812 0.839 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
55. fgfr2 ENSDARG00000058115 6743 2.408 - 0.982 0.716 - - - - - 0.710 fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]
56. clvs2 ENSDARG00000053122 1390 2.403 - - - - - - 0.801 0.857 0.745 clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
57. dpysl4 ENSDARG00000103490 534 2.391 - - - - - - 0.781 0.792 0.818 dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
58. coe2 coe2 1633 2.391 - - - - - - 0.774 0.758 0.859
59. lbr ENSDARG00000014013 4835 2.388 - - - - 0.717 0.852 - - 0.819 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
60. TMEM57 TMEM57 260 2.387 - - - - - - 0.761 0.750 0.876
61. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 2.378 - - - - - - 0.764 0.839 0.775 zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
62. hmgb3a ENSDARG00000056725 15668 2.375 - - - - 0.716 - 0.822 - 0.837 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
63. puf60a ENSDARG00000032175 5618 2.374 - - 0.752 - - - 0.757 - 0.865 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
64. insm1b ENSDARG00000053301 2032 2.371 - - - 0.791 0.724 - - - 0.856 insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
65. bcl11ab ENSDARG00000063153 3032 2.37 - - - 0.761 - - 0.717 - 0.892 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
66. irx1a ENSDARG00000101831 644 2.362 - - 0.736 - - - - 0.802 0.824 iroquois homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040707-1]
67. si:ch211-202e12.3 401 2.346 - - - 0.718 - - - 0.838 0.790 si:ch211-202e12.3, transcript variant X6
68. smarca4 smarca4 9726 2.342 - 0.875 - 0.758 0.709 - - - -
69. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 2.342 - - - - 0.700 - 0.818 - 0.824 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
70. gap43 ENSDARG00000099744 4114 2.341 - - - - - - 0.730 0.756 0.855 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
71. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.329 - - - 0.734 - - 0.828 - 0.767 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
72. pou3f3a ENSDARG00000042032 2835 2.324 - - - 0.765 - - 0.825 - 0.734 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
73. CYTH2 ENSDARG00000028800 2349 2.322 - - 0.752 - - - 0.765 - 0.805 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
74. RLTPR 1158 2.318 - - - - - - 0.730 0.781 0.807 RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing, transcript variant X1
75. fscn1a ENSDARG00000059680 3999 2.318 - - - 0.784 - - - 0.826 0.708 fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
76. nova2 ENSDARG00000017673 7685 2.317 - - - 0.818 - - 0.779 - 0.720 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
77. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 2.316 - - - 0.731 0.777 - - - 0.808 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
78. RASGRF2 RASGRF2 644 2.315 - - - - - - 0.797 0.749 0.769
79. mllt11 ENSDARG00000071026 2518 2.313 - - - - - - 0.757 0.767 0.789 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
80. CABZ01028287.1 CABZ01028287.1 626 2.312 - - - - 0.735 - 0.828 - 0.749
81. tgif1 ENSDARG00000059337 4020 2.308 - - 0.773 - - - 0.749 - 0.786 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
82. wu:fc51f04 wu:fc51f04 7074 2.308 - - - 0.751 - - - 0.755 0.802
83. wdr5 ENSDARG00000016903 4834 2.298 - - - - 0.781 - - 0.764 0.753 WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
84. fzd3a ENSDARG00000021664 1958 2.294 - - 0.701 - - - 0.784 - 0.809 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
85. polr2a ENSDARG00000099966 5706 2.293 - - 0.811 - - - - 0.726 0.756 polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
86. ssbp4 ENSDARG00000056483 10196 2.293 - - - - - 0.716 0.714 0.863 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
87. sumo3b ENSDARG00000035993 3414 2.293 - - 0.789 - 0.761 - 0.743 - - small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
88. cspg5a ENSDARG00000069981 1699 2.292 - - 0.709 0.739 - - 0.844 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
89. LMTK3 LMTK3 222 2.291 - - - - - - 0.716 0.850 0.725
90. ipo9 ENSDARG00000016753, ENSDARG00000113327 936 2.29 - - - - 0.717 - 0.824 0.749 - importin 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2953]
91. rbpjb ENSDARG00000052091 3122 2.286 - - 0.791 - - - - 0.702 0.793 recombination signal binding protein for immunoglobulin kappa J region b [Source:ZFIN;Acc:ZDB-GENE-070319-1]
92. tle2 5014 2.286 - - - 0.763 0.723 - 0.800 - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
93. npas3b npas3b 1446 2.284 - - 0.762 0.751 - - 0.771 - -
94. si:dkeyp-113d7.10 ENSDARG00000092359 1585 2.283 - - 0.763 - - - - 0.723 0.797 si:dkeyp-113d7.10 [Source:ZFIN;Acc:ZDB-GENE-061207-80]
95. papss1 ENSDARG00000057099 809 2.282 - - - - - 0.768 0.712 0.802 - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-080721-5]
96. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.282 - - - - 0.722 - 0.789 0.771 - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
97. tox3 ENSDARG00000073957 3075 2.279 - - - - 0.751 0.747 - 0.781 - TOX high mobility group box family member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-209]
98. sept5b ENSDARG00000036031 188 2.278 - - - - - - 0.793 0.769 0.716 septin 5b [Source:ZFIN;Acc:ZDB-GENE-040808-43]
99. foxk2 ENSDARG00000030583 2982 2.274 - - - - - - 0.710 0.794 0.770 forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
100. her4.1 ENSDARG00000056732 1264 2.273 - - - - 0.778 - 0.706 0.789 - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]

There are 2017 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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