Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for thrab

Gene Name Gene ID Reads Annotation
thrab ENSDARG00000052654 315 thyroid hormone receptor alpha b [Source:ZFIN;Acc:ZDB-GENE-060613-1]










Genes with expression patterns similar to thrab

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. thrab ENSDARG00000052654 315 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 thyroid hormone receptor alpha b [Source:ZFIN;Acc:ZDB-GENE-060613-1]
2. zbtb17 ENSDARG00000074548 661 2.163 - 0.708 - - - - 0.728 0.727 - zinc finger and BTB domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-090313-240]
3. lpar2a ENSDARG00000042338 285 1.685 0.855 - - - - - - 0.830 - lysophosphatidic acid receptor 2a [Source:ZFIN;Acc:ZDB-GENE-040801-97]
4. TTF2 ENSDARG00000104105 564 1.564 0.806 - - - - - 0.758 - - transcription termination factor, RNA polymerase II [Source:ZFIN;Acc:ZDB-GENE-110411-73]
5. mocs3 ENSDARG00000008239 163 1.544 - - - - - 0.825 - 0.719 - molybdenum cofactor synthesis 3 [Source:ZFIN;Acc:ZDB-GENE-040426-782]
6. mcf2la ENSDARG00000075859 882 1.541 - - - - - 0.817 - 0.724 - mcf.2 cell line derived transforming sequence-like a [Source:ZFIN;Acc:ZDB-GENE-090312-122]
7. wtip ENSDARG00000103607 797 1.525 - 0.767 - - - - - 0.758 - WT1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-050419-261]
8. polr2m ENSDARG00000074968, ENSDARG00000113507 352 1.507 0.803 - - - - - - 0.704 - RNA polymerase II subunit M [Source:ZFIN;Acc:ZDB-GENE-160728-95]
9. fignl1 ENSDARG00000016427 636 1.5 - 0.764 - - - 0.736 - - - fidgetin-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1862]
10. mir130b 180 1.498 0.737 - - - - 0.761 - - - microRNA 130b
11. slc24a4b ENSDARG00000067509 33 1.497 0.715 - - - - - 0.782 - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 4b [Source:ZFIN;Acc:ZDB-GENE-081031-75]
12. emx3 ENSDARG00000020417 85 1.466 0.715 - - - - - - 0.751 - empty spiracles homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-53]
13. hapln3 ENSDARG00000045802, ENSDARG00000116387 2242 1.411 - - - - - 0.705 - 0.706 - hyaluronan and proteoglycan link protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2089]
14. STARD5 ENSDARG00000076117 251 0.927 0.927 - - - - - - - - StAR-related lipid transfer (START) domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-130103-4]
15. si:ch211-250c4.3 si:ch211-250c4.3 677 0.918 - - - - - 0.918 - - -
16. NMNAT3 ENSDARG00000077034 126 0.918 0.918 - - - - - - - - nicotinamide nucleotide adenylyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:20989]
17. adamtsl7 ENSDARG00000055439 575 0.908 - - - - - 0.908 - - - ADAMTS-like 7 [Source:ZFIN;Acc:ZDB-GENE-070816-2]
18. CR388013.3 CR388013.3 45 0.885 - - - - - - 0.885 - -
19. tpcn2 ENSDARG00000100420 626 0.885 - - - - - 0.885 - - - two pore segment channel 2 [Source:ZFIN;Acc:ZDB-GENE-061103-202]
20. ppil2 ENSDARG00000002016, ENSDARG00000116167 914 0.879 - 0.879 - - - - - - - peptidylprolyl isomerase (cyclophilin)-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1096]
21. zgc:162945 ENSDARG00000028815, ENSDARG00000116996 439 0.879 - - - - - - 0.879 - - zgc:162945 [Source:ZFIN;Acc:ZDB-GENE-030131-3975]
22. pitpnb ENSDARG00000036005 513 0.878 - 0.878 - - - - - - - phosphatidylinositol transfer protein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-895]
23. smg6 ENSDARG00000100481 493 0.877 - - - - - - 0.877 - - SMG6 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-081107-52]
24. gps2 ENSDARG00000035558, ENSDARG00000113597 1233 0.874 - - - - - 0.874 - - - G protein pathway suppressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1176]
25. SLC27A2 SLC27A2 436 0.874 0.874 - - - - - - - -
26. CU695232.1 ENSDARG00000098286 1266 0.873 - - - - - - 0.873 - - zinc transporter ZIP9-B-like [Source:NCBI gene;Acc:571446]
27. CABZ01085085.1 CABZ01085085.1 123 0.871 0.871 - - - - - - - -
28. CDKN2AIP ENSDARG00000035853 341 0.868 0.868 - - - - - - - - CDKN2A interacting protein [Source:ZFIN;Acc:ZDB-GENE-041010-188]
29. slc6a13 369 0.866 - - - - - - 0.866 - - solute carrier family 6 (neurotransmitter transporter), member 13, transcript variant X1
30. ranbp3 ranbp3 1009 0.865 - 0.865 - - - - - - -
31. BX004880.1 BX004880.1 638 0.855 - - - - - 0.855 - - -
32. CU462878.1 ENSDARG00000090072 352 0.855 0.855 - - - - - - - - keratinocyte associated protein 3 [Source:NCBI gene;Acc:100538219]
33. chl1a ENSDARG00000077881 1488 0.854 - - - - - 0.854 - - - cell adhesion molecule L1-like a [Source:ZFIN;Acc:ZDB-GENE-090313-201]
34. si:dkey-162h11.3 41 0.853 0.853 - - - - - - - - si:dkey-162h11.3, transcript variant X2
35. BX470211.1 ENSDARG00000105629 111 0.853 0.853 - - - - - - - -
36. PSMB10 ENSDARG00000043781 243 0.853 - - - - - - 0.853 - - proteasome subunit beta 10 [Source:ZFIN;Acc:ZDB-GENE-040718-278]
37. MSR1 MSR1 449 0.853 0.853 - - - - - - - -
38. slc7a14a ENSDARG00000010816 425 0.852 - - - - - - 0.852 - - solute carrier family 7, member 14a [Source:ZFIN;Acc:ZDB-GENE-070912-112]
39. rnaset2 ENSDARG00000036282 2226 0.852 - - - - - 0.852 - - - ribonuclease T2 [Source:ZFIN;Acc:ZDB-GENE-030131-2513]
40. si:dkey-193c22.2 ENSDARG00000076735 2791 0.849 - - - - - 0.849 - - - si:dkey-193c22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-337]
41. si:ch1073-160m15.1 si:ch1073-160m15.1 74 0.849 - - - - - - 0.849 - -
42. SNORA5 SNORA5 72 0.848 - - - - - - 0.848 - -
43. CLDND1 CLDND1 155 0.848 - - - - - 0.848 - - -
44. CU855694.1 ENSDARG00000098513 402 0.847 0.847 - - - - - - - -
45. akt2 ENSDARG00000011219 647 0.844 0.844 - - - - - - - - v-akt murine thymoma viral oncogene homolog 2 [Source:ZFIN;Acc:ZDB-GENE-031007-5]
46. RUNDC1 ENSDARG00000091962 693 0.842 - - - - - 0.842 - - - RUN domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25418]
47. kcnc4 ENSDARG00000061288, ENSDARG00000113894 95 0.842 - - - - - 0.842 - - - potassium voltage-gated channel, Shaw-related subfamily, member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-773]
48. ppp2r5d ENSDARG00000014428 771 0.839 - - - - - 0.839 - - - protein phosphatase 2, regulatory subunit B', delta [Source:ZFIN;Acc:ZDB-GENE-040426-2568]
49. arid1ab ENSDARG00000101891 1722 0.838 - - - - - 0.838 - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
50. znf653 ENSDARG00000093469 149 0.838 - - - - - - 0.838 - - zinc finger protein 653 [Source:ZFIN;Acc:ZDB-GENE-071116-3]
51. hs3st3b1a ENSDARG00000099149, ENSDARG00000113644 443 0.837 0.837 - - - - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1a [Source:ZFIN;Acc:ZDB-GENE-070202-4]
52. srfa ENSDARG00000053918 1773 0.836 - - - - - 0.836 - - - serum response factor a [Source:ZFIN;Acc:ZDB-GENE-990714-29]
53. mrpl40 ENSDARG00000043554 2198 0.835 - 0.835 - - - - - - - mitochondrial ribosomal protein L40 [Source:ZFIN;Acc:ZDB-GENE-040912-37]
54. phldb1a ENSDARG00000061093 1637 0.835 - - - - - 0.835 - - - pleckstrin homology-like domain, family B, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-272]
55. megf6b ENSDARG00000074808 847 0.833 - - - - - 0.833 - - - multiple EGF-like-domains 6b [Source:ZFIN;Acc:ZDB-GENE-101112-3]
56. tmem2 2572 0.833 - - - - - 0.833 - - - transmembrane protein 2, transcript variant X1
57. PLA2G3_1 PLA2G3_1 411 0.832 0.832 - - - - - - - -
58. si:dkey-178e17.3 ENSDARG00000058658 271 0.832 - - - - - 0.832 - - - si:dkey-178e17.3 [Source:ZFIN;Acc:ZDB-GENE-081104-335]
59. ddx42 ENSDARG00000037928 1659 0.831 - - - - - 0.831 - - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
60. doc2d ENSDARG00000079962 76 0.829 - - - - - 0.829 - - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
61. si:ch211-71m22.2 si:ch211-71m22.2 11 0.828 - - - - - - 0.828 - -
62. SLC12A6 SLC12A6 883 0.827 0.827 - - - - - - - -
63. fbxo7 ENSDARG00000099833 304 0.826 0.826 - - - - - - - - F-box protein 7 [Source:ZFIN;Acc:ZDB-GENE-050913-68]
64. TMEM17 ENSDARG00000116334 218 0.826 - - - - - - 0.826 - - transmembrane protein 17 [Source:ZFIN;Acc:ZDB-GENE-070615-15]
65. snx8a ENSDARG00000074842 411 0.826 0.826 - - - - - - - - sorting nexin 8a [Source:ZFIN;Acc:ZDB-GENE-031202-1]
66. pi4k2b ENSDARG00000013881 1337 0.826 - - - - - 0.826 - - - phosphatidylinositol 4-kinase type 2 beta [Source:ZFIN;Acc:ZDB-GENE-070112-990]
67. aplnra_1 ENSDARG00000002172 82 0.824 - - - - - - 0.824 - - apelin receptor a [Source:ZFIN;Acc:ZDB-GENE-060929-512]
68. depdc5 ENSDARG00000078105 745 0.823 0.823 - - - - - - - - DEP domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-091204-356]
69. nanp ENSDARG00000075143, ENSDARG00000114467 328 0.823 - - - - - 0.823 - - - N-acetylneuraminic acid phosphatase [Source:ZFIN;Acc:ZDB-GENE-050522-94]
70. vcanb ENSDARG00000009401 3611 0.823 - - - - - 0.823 - - - versican b [Source:ZFIN;Acc:ZDB-GENE-030131-2185]
71. sfrp1b ENSDARG00000057678, ENSDARG00000115373 95 0.823 0.823 - - - - - - - - secreted frizzled-related protein 1b [Source:ZFIN;Acc:ZDB-GENE-061103-1]
72. rad17 ENSDARG00000018918 332 0.823 - - - - - - 0.823 - - RAD17 checkpoint clamp loader component [Source:ZFIN;Acc:ZDB-GENE-040718-409]
73. pmaip1 ENSDARG00000089307 236 0.823 - - - - - 0.823 - - - phorbol-12-myristate-13-acetate-induced protein 1 [Source:ZFIN;Acc:ZDB-GENE-070119-3]
74. TMEM66 TMEM66 487 0.822 - - - - - - - 0.822 -
75. asxl1 ENSDARG00000036956, ENSDARG00000115751 2955 0.822 0.822 - - - - - - - - ASXL transcriptional regulator 1 [Source:ZFIN;Acc:ZDB-GENE-091116-9]
76. samd1b ENSDARG00000079062 280 0.822 - - - - - 0.822 - - - sterile alpha motif domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-090313-2]
77. agps ENSDARG00000042821 203 0.822 - - - - - - - 0.822 - alkylglycerone phosphate synthase [Source:ZFIN;Acc:ZDB-GENE-031118-14]
78. brf1a ENSDARG00000017835 206 0.822 - - - - - - - 0.822 - BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
79. si:ch211-213a13.1 ENSDARG00000090600 381 0.821 - - - - - 0.821 - - - si:ch211-213a13.1 [Source:ZFIN;Acc:ZDB-GENE-050208-471]
80. zgc:112484 zgc:112484 780 0.819 - - - - - - - 0.819 -
81. nap1l1 ENSDARG00000101813 819 0.819 0.819 - - - - - - - - nucleosome assembly protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-030516-2]
82. tbc1d32 ENSDARG00000041734 486 0.819 0.819 - - - - - - - - TBC1 domain family, member 32 [Source:ZFIN;Acc:ZDB-GENE-061106-5]
83. trpc4apb ENSDARG00000020647 670 0.818 - - - - - - - 0.818 - transient receptor potential cation channel, subfamily C, member 4 associated protein b [Source:ZFIN;Acc:ZDB-GENE-000330-2]
84. slc7a10a ENSDARG00000008100 178 0.817 - - - - - 0.817 - - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10a [Source:ZFIN;Acc:ZDB-GENE-080116-1]
85. arfgef1 ENSDARG00000063474 1131 0.817 - - - - - 0.817 - - - ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) [Source:ZFIN;Acc:ZDB-GENE-030131-108]
86. dmtn ENSDARG00000013110 791 0.816 - 0.816 - - - - - - - dematin actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9438]
87. zfpm1 ENSDARG00000041572, ENSDARG00000109585 331 0.816 - - - - - 0.816 - - - zinc finger protein, FOG family member 1 [Source:ZFIN;Acc:ZDB-GENE-050419-238]
88. dcaf12 ENSDARG00000063155 697 0.815 - - - - - 0.815 - - - DDB1 and CUL4 associated factor 12 [Source:ZFIN;Acc:ZDB-GENE-061013-363]
89. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.814 - - - - - 0.814 - - - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
90. bcap29 ENSDARG00000016231 299 0.814 0.814 - - - - - - - - B cell receptor associated protein 29 [Source:ZFIN;Acc:ZDB-GENE-050522-468]
91. map3k5 ENSDARG00000005416, ENSDARG00000114051 177 0.813 - - - - - 0.813 - - - mitogen-activated protein kinase kinase kinase 5 [Source:ZFIN;Acc:ZDB-GENE-030827-3]
92. znf236 ENSDARG00000095890 410 0.812 - - - - - - 0.812 - - zinc finger protein 236 [Source:ZFIN;Acc:ZDB-GENE-041111-195]
93. BX005008.2 BX005008.2 708 0.812 0.812 - - - - - - - -
94. ripk1l ENSDARG00000006677 593 0.811 - - - - - 0.811 - - - receptor (TNFRSF)-interacting serine-threonine kinase 1, like [Source:ZFIN;Acc:ZDB-GENE-070705-132]
95. si:dkey-54g2.6 si:dkey-54g2.6 252 0.811 - - - - - - 0.811 - -
96. rab23 ENSDARG00000004151 1077 0.81 - 0.810 - - - - - - - RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]
97. zyx ENSDARG00000075733 429 0.81 - - - - - - - 0.810 - zyxin [Source:ZFIN;Acc:ZDB-GENE-070928-18]
98. ttc13 ENSDARG00000063242 1360 0.809 - - - - - 0.809 - - - tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
99. tmco4 ENSDARG00000078924 330 0.807 - 0.807 - - - - - - - transmembrane and coiled-coil domains 4 [Source:ZFIN;Acc:ZDB-GENE-041008-216]
100. NGEF ENSDARG00000076179 445 0.807 - - - - - 0.807 - - - neuronal guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-130530-794]

There are 613 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA