Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for thraa

Gene Name Gene ID Reads Annotation
thraa ENSDARG00000000151 148 thyroid hormone receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-990415-263]










Genes with expression patterns similar to thraa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. thraa ENSDARG00000000151 148 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 thyroid hormone receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-990415-263]
2. nmnat1 ENSDARG00000105748 102 2.257 0.749 - - - - 0.739 0.769 - - nicotinamide nucleotide adenylyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-101]
3. FAM135B ENSDARG00000105121 207 1.883 0.951 0.932 - - - - - - - family with sequence similarity 135 member B [Source:HGNC Symbol;Acc:HGNC:28029]
4. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 1.822 0.918 0.904 - - - - - - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
5. CU570781.1 ENSDARG00000094656 49 1.746 - - - - - 0.864 0.882 - -
6. MIIP ENSDARG00000088346 382 1.733 0.884 - - - - 0.849 - - - migration and invasion inhibitory protein [Source:ZFIN;Acc:ZDB-GENE-130620-1]
7. TRIM35_4 TRIM35_4 63 1.699 0.846 - - - - 0.853 - - -
8. cnot10 ENSDARG00000058528 478 1.673 - - - - - 0.867 0.806 - - CCR4-NOT transcription complex, subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060929-368]
9. mir184 48 1.649 0.889 - - - - - 0.760 - - microRNA 184
10. cadpsa ENSDARG00000043661 160 1.642 - 0.833 - - - - 0.809 - - Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
11. zgc:113279 ENSDARG00000099533 156 1.634 - 0.712 - - - - 0.922 - - zgc:113279 [Source:ZFIN;Acc:ZDB-GENE-050522-529]
12. ftr56 ENSDARG00000030954 23 1.633 0.889 0.744 - - - - - - - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
13. bag5 ENSDARG00000017316 195 1.622 - - - - - 0.883 0.739 - - BCL2 associated athanogene 5 [Source:ZFIN;Acc:ZDB-GENE-050913-58]
14. btd ENSDARG00000099596 88 1.615 0.889 - - - - 0.726 - - - biotinidase [Source:ZFIN;Acc:ZDB-GENE-060825-186]
15. ube2w ENSDARG00000044923 438 1.613 - - - - - 0.833 0.780 - - ubiquitin-conjugating enzyme E2W (putative) [Source:ZFIN;Acc:ZDB-GENE-050506-94]
16. zgc:101583 ENSDARG00000026682, ENSDARG00000112271 971 1.6 0.800 - - - - 0.800 - - - zgc:101583 [Source:ZFIN;Acc:ZDB-GENE-041212-75]
17. st6galnac1.1 ENSDARG00000043814 95 1.598 - 0.744 - - - 0.854 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041014-160]
18. atrnl1b ENSDARG00000006420 641 1.594 0.755 0.839 - - - - - - - attractin-like 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8092]
19. chia.3 ENSDARG00000009612 14 1.583 - 0.744 - - - 0.839 - - - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
20. timm50 ENSDARG00000031098, ENSDARG00000109900 988 1.564 - - - - - 0.824 0.740 - - translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1618]
21. ugt5g1 ENSDARG00000032862, ENSDARG00000111242 222 1.548 0.752 - - - - 0.796 - - - UDP glucuronosyltransferase 5 family, polypeptide G1 [Source:ZFIN;Acc:ZDB-GENE-080305-10]
22. CABZ01081752.1 ENSDARG00000099245 84 1.542 - 0.744 - - - - 0.798 - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100330167]
23. micu1 ENSDARG00000063358 131 1.542 - 0.753 - - - 0.789 - - - mitochondrial calcium uptake 1 [Source:ZFIN;Acc:ZDB-GENE-070410-22]
24. rmnd1 ENSDARG00000027465 116 1.528 - 0.744 - - - 0.784 - - - required for meiotic nuclear division 1 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-21]
25. EDEM3 ENSDARG00000074129 805 1.513 0.786 - - - - - 0.727 - - ER degradation enhancer, mannosidase alpha-like 3 [Source:ZFIN;Acc:ZDB-GENE-070801-5]
26. rasl12 ENSDARG00000002701 66 1.511 - 0.744 - - - - 0.767 - - RAS-like, family 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1201]
27. cflara ENSDARG00000055966 464 1.495 - - - - - 0.755 0.740 - - CASP8 and FADD-like apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-030826-3]
28. cbln13 ENSDARG00000026904, ENSDARG00000114505 93 1.495 - - - - - 0.714 0.781 - - cerebellin 13 [Source:ZFIN;Acc:ZDB-GENE-070912-288]
29. ccdc129 37 1.479 - 0.744 - - - - 0.735 - - coiled-coil domain containing 129, transcript variant X2
30. rgl3a ENSDARG00000071213 350 1.472 0.752 - - - - - 0.720 - - ral guanine nucleotide dissociation stimulator-like 3a [Source:ZFIN;Acc:ZDB-GENE-101130-1]
31. GRAMD4 GRAMD4 1967 1.432 - - - - - 0.714 0.718 - -
32. zgc:163121 ENSDARG00000055370 110 0.927 0.927 - - - - - - - - zgc:163121 [Source:ZFIN;Acc:ZDB-GENE-070424-80]
33. fam86a fam86a 174 0.924 - - - - - 0.924 - - -
34. TTBK2_1 TTBK2_1 649 0.921 0.921 - - - - - - - -
35. fam160b2 ENSDARG00000060029, ENSDARG00000115630 221 0.921 0.921 - - - - - - - - family with sequence similarity 160, member B2 [Source:ZFIN;Acc:ZDB-GENE-061110-76]
36. si:ch211-158c3.1 si:ch211-158c3.1 37 0.918 - 0.918 - - - - - - -
37. slc5a8l ENSDARG00000003697, ENSDARG00000110685 69 0.917 - 0.917 - - - - - - - solute carrier family 5 (iodide transporter), member 8-like [Source:ZFIN;Acc:ZDB-GENE-061110-98]
38. rhogd ENSDARG00000030608, ENSDARG00000112157 599 0.914 - - - - - - 0.914 - - ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
39. trmt44 ENSDARG00000033957 133 0.913 0.913 - - - - - - - - tRNA methyltransferase 44 homolog [Source:ZFIN;Acc:ZDB-GENE-041010-189]
40. nthl1 ENSDARG00000042881 252 0.913 - - - - - 0.913 - - - nth-like DNA glycosylase 1 [Source:ZFIN;Acc:ZDB-GENE-120511-4]
41. ZDHHC5 ZDHHC5 836 0.913 - - - - - 0.913 - - -
42. zgc:153219 ENSDARG00000054054, ENSDARG00000112177 135 0.911 - 0.911 - - - - - - - zgc:153219 [Source:ZFIN;Acc:ZDB-GENE-060929-144]
43. trim37 ENSDARG00000076473 115 0.911 - 0.911 - - - - - - - tripartite motif containing 37 [Source:ZFIN;Acc:ZDB-GENE-030131-2957]
44. cep76 ENSDARG00000058319 143 0.911 - 0.911 - - - - - - - centrosomal protein 76 [Source:ZFIN;Acc:ZDB-GENE-070820-5]
45. si:dkey-1f1.4 si:dkey-1f1.4 105 0.908 - - - - - 0.908 - - -
46. si:ch73-211l2.1 605 0.907 - - - - - - 0.907 - - si:ch73-211l2.1
47. INPP5K INPP5K 137 0.906 0.906 - - - - - - - -
48. APLF APLF 691 0.904 0.904 - - - - - - - -
49. st6galnac5b ENSDARG00000057433, ENSDARG00000110829 248 0.901 - - - - - 0.901 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5b [Source:ZFIN;Acc:ZDB-GENE-040912-25]
50. si:ch211-103e16.4 si:ch211-103e16.4 227 0.901 - - - - - 0.901 - - -
51. nkx1.2la ENSDARG00000006350 76 0.901 0.901 - - - - - - - - NK1 transcription factor related 2-like,a [Source:ZFIN;Acc:ZDB-GENE-040615-1]
52. polr3a ENSDARG00000102569 1072 0.899 - - - - - 0.899 - - - polymerase (RNA) III (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-050208-103]
53. pidd pidd 86 0.899 0.899 - - - - - - - -
54. nubp2 ENSDARG00000055653 803 0.897 0.897 - - - - - - - - nucleotide binding protein 2 (MinD homolog, E. coli) [Source:ZFIN;Acc:ZDB-GENE-051023-10]
55. CABZ01100187.1 CABZ01100187.1 191 0.895 0.895 - - - - - - - -
56. plekhf1 ENSDARG00000102435, ENSDARG00000110694 314 0.895 0.895 - - - - - - - - pleckstrin homology domain containing, family F (with FYVE domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1289]
57. psmb5 ENSDARG00000075445, ENSDARG00000111880 126 0.894 - 0.894 - - - - - - - proteasome subunit beta 5 [Source:ZFIN;Acc:ZDB-GENE-990415-215]
58. si:dkey-181m9.8 ENSDARG00000078267 123 0.893 0.893 - - - - - - - - si:dkey-181m9.8 [Source:ZFIN;Acc:ZDB-GENE-070912-399]
59. tlr3 ENSDARG00000016065, ENSDARG00000117078 66 0.893 - - - - - 0.893 - - - toll-like receptor 3 [Source:ZFIN;Acc:ZDB-GENE-040219-7]
60. SLC5A6 SLC5A6 179 0.89 0.890 - - - - - - - -
61. si:ch211-241j12.3 ENSDARG00000043963 128 0.889 - - - - - - 0.889 - - si:ch211-241j12.3 [Source:ZFIN;Acc:ZDB-GENE-040724-72]
62. cart4 ENSDARG00000070142 55 0.889 0.889 - - - - - - - - cocaine- and amphetamine-regulated transcript 4 [Source:ZFIN;Acc:ZDB-GENE-060503-863]
63. fut9d ENSDARG00000028098 427 0.889 0.889 - - - - - - - - fucosyltransferase 9d [Source:ZFIN;Acc:ZDB-GENE-050309-15]
64. BX000442.2 BX000442.2 8 0.889 0.889 - - - - - - - -
65. si:ch73-289h5.3 si:ch73-289h5.3 9 0.889 0.889 - - - - - - - -
66. crygm3 ENSDARG00000078189, ENSDARG00000112851 6 0.889 0.889 - - - - - - - - crystallin, gamma M3 [Source:ZFIN;Acc:ZDB-GENE-050516-6]
67. THBS1_1 THBS1_1 6 0.889 0.889 - - - - - - - -
68. grin2da ENSDARG00000086207 28 0.889 0.889 - - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2D, a [Source:ZFIN;Acc:ZDB-GENE-041008-124]
69. esr2a ENSDARG00000016454 23 0.889 0.889 - - - - - - - - estrogen receptor 2a [Source:ZFIN;Acc:ZDB-GENE-030116-2]
70. acta2 ENSDARG00000045180 96 0.889 0.889 - - - - - - - - actin, alpha 2, smooth muscle, aorta [Source:ZFIN;Acc:ZDB-GENE-030131-1229]
71. tbxas1 ENSDARG00000002249 55 0.889 0.889 - - - - - - - - thromboxane A synthase 1 (platelet) [Source:ZFIN;Acc:ZDB-GENE-030131-8805]
72. crfb12 ENSDARG00000052413 47 0.889 0.889 - - - - - - - - cytokine receptor family member B12 [Source:ZFIN;Acc:ZDB-GENE-060421-4184]
73. serpinb1l1 ENSDARG00000095830 14 0.889 0.889 - - - - - - - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-040715-5]
74. CABZ01012857.1 CABZ01012857.1 78 0.889 0.889 - - - - - - - -
75. CR376723.1 CR376723.1 8 0.889 0.889 - - - - - - - -
76. CABZ01113374.2 CABZ01113374.2 27 0.889 0.889 - - - - - - - -
77. CU464087.2 CU464087.2 15 0.889 0.889 - - - - - - - -
78. rpl37_1 ENSDARG00000034291, ENSDARG00000076360 365 0.888 0.888 - - - - - - - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
79. ddhd2 ENSDARG00000076765 29 0.888 - - - - - - 0.888 - - DDHD domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080519-4]
80. lrrc28 ENSDARG00000057477 444 0.886 - - - - - 0.886 - - - leucine rich repeat containing 28 [Source:ZFIN;Acc:ZDB-GENE-061128-1]
81. aff2 ENSDARG00000052242 540 0.886 - - - - - 0.886 - - - AF4/FMR2 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-110411-190]
82. PLEKHG3 72 0.885 0.885 - - - - - - - - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
83. cep104 ENSDARG00000060361 303 0.885 - - - - - 0.885 - - - centrosomal protein 104 [Source:ZFIN;Acc:ZDB-GENE-060503-195]
84. si:dkey-78a14.4 ENSDARG00000036066 17 0.882 0.882 - - - - - - - - si:dkey-78a14.4 [Source:ZFIN;Acc:ZDB-GENE-110408-8]
85. pgm3 ENSDARG00000024654 366 0.881 - - - - - 0.881 - - - phosphoglucomutase 3 [Source:ZFIN;Acc:ZDB-GENE-041024-13]
86. cyp2p10 ENSDARG00000042990 176 0.881 - - - - - 0.881 - - - cytochrome P450, family 2, subfamily P, polypeptide 10 [Source:ZFIN;Acc:ZDB-GENE-040120-1]
87. si:ch211-265g21.1 si:ch211-265g21.1 35 0.88 - - - - - 0.880 - - -
88. si:dkey-96h14.3 si:dkey-96h14.3 355 0.88 0.880 - - - - - - - -
89. EML5 ENSDARG00000053517 74 0.88 - 0.880 - - - - - - - echinoderm microtubule associated protein like 5 [Source:HGNC Symbol;Acc:HGNC:18197]
90. lipeb ENSDARG00000101145 184 0.879 - - - - - 0.879 - - - lipase, hormone-sensitive b [Source:ZFIN;Acc:ZDB-GENE-100921-71]
91. nxph2a ENSDARG00000063224 75 0.879 0.879 - - - - - - - - neurexophilin 2a [Source:ZFIN;Acc:ZDB-GENE-060503-124]
92. hs3st3l ENSDARG00000059903 184 0.878 - - - - - - 0.878 - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
93. spon2a ENSDARG00000025465, ENSDARG00000115300 294 0.878 - - - - - 0.878 - - - spondin 2a, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-160]
94. si:dkey-49m19.5 si:dkey-49m19.5 85 0.877 0.877 - - - - - - - -
95. map2k7 ENSDARG00000008279 285 0.876 0.876 - - - - - - - - mitogen-activated protein kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-090312-186]
96. slc9a5 ENSDARG00000078560 76 0.876 0.876 - - - - - - - - solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5 [Source:ZFIN;Acc:ZDB-GENE-080225-43]
97. chico ENSDARG00000019588 77 0.876 - - - - - - 0.876 - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
98. dusp7 ENSDARG00000101413 1307 0.876 - - - - - - 0.876 - - dual specificity phosphatase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5457]
99. zgc:172120 ENSDARG00000069199 278 0.875 0.875 - - - - - - - - zgc:172120 [Source:ZFIN;Acc:ZDB-GENE-080204-46]
100. kcnk5a ENSDARG00000023587, ENSDARG00000111204 128 0.875 - - - - - - 0.875 - - potassium channel, subfamily K, member 5a [Source:ZFIN;Acc:ZDB-GENE-051113-112]

There are 1204 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA