Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tgif1

Gene Name Gene ID Reads Annotation
tgif1 ENSDARG00000059337 4020 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]










Genes with expression patterns similar to tgif1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tgif1 ENSDARG00000059337 4020 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
2. puf60a ENSDARG00000032175 5618 3.987 - 0.804 0.760 - - 0.866 0.820 - 0.737 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
3. tmpob ENSDARG00000022978 8121 3.955 - - 0.813 - - 0.820 0.841 0.745 0.736 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
4. irx5a ENSDARG00000034043 1694 3.926 - - 0.709 0.737 0.859 - 0.732 0.889 - iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
5. sf1 ENSDARG00000008188 5142 3.787 0.715 - 0.701 0.809 - - - 0.733 0.829 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
6. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 3.269 - 0.863 0.830 - 0.772 - - 0.804 - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
7. srrm1 ENSDARG00000001244 4972 3.176 - 0.854 0.745 - - - 0.722 0.855 - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
8. stmn1a ENSDARG00000004169 21169 3.155 - 0.724 - - 0.877 - 0.776 - 0.778 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
9. fam60al 2846 3.148 - 0.753 0.794 0.759 - - 0.842 - - family with sequence similarity 60, member A, like
10. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 3.118 - - 0.744 0.845 - 0.749 0.780 - - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
11. tle2 5014 3.114 - 0.720 - 0.730 - 0.769 0.895 - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
12. rbb4 rbb4 15541 3.055 - - 0.777 - - 0.763 0.732 - 0.783
13. npas3b npas3b 1446 3.043 - - 0.730 0.804 - 0.768 0.741 - -
14. mxi1 ENSDARG00000040884, ENSDARG00000111950 3239 2.995 - - 0.715 0.742 - - 0.757 - 0.781 max interactor 1, dimerization protein [Source:ZFIN;Acc:ZDB-GENE-990415-151]
15. C24H17orf96 C24H17orf96 1538 2.959 - - 0.711 0.795 - - 0.745 - 0.708
16. mcm5 ENSDARG00000019507 6407 2.95 - 0.706 - 0.722 - - - 0.729 0.793 minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
17. vezf1a ENSDARG00000008247 1449 2.935 - - 0.723 0.735 - - 0.760 - 0.717 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
18. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 2.927 - - 0.743 - - 0.701 0.730 - 0.753 down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
19. kpnb1 ENSDARG00000104889 9282 2.876 - - 0.717 0.703 - - - 0.735 0.721 karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
20. rbm14a ENSDARG00000012723, ENSDARG00000114603 3802 2.552 - - - 0.836 0.968 - - - 0.748 RNA binding motif protein 14a [Source:ZFIN;Acc:ZDB-GENE-050522-496]
21. snrpd3l ENSDARG00000076283 7655 2.538 - - - - - 0.865 0.847 - 0.826 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
22. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.498 - - - 0.790 - - 0.843 - 0.865 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
23. hnrnpub ENSDARG00000004735 16496 2.479 - - - - - 0.831 0.833 - 0.815 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
24. HNRNPAB HNRNPAB 22267 2.473 - - - - 0.746 - 0.917 - 0.810
25. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.469 - - - - 0.775 - 0.877 - 0.817 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
26. nkx6.2 ENSDARG00000104735 5081 2.461 - - - - 0.903 - 0.743 0.815 - NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
27. hmgb1b ENSDARG00000030479 10398 2.459 - - 0.830 - - 0.791 0.838 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
28. kdm1a ENSDARG00000060679 6152 2.448 - - 0.842 0.763 - - 0.843 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
29. zgc:174906 ENSDARG00000075314 2187 2.414 - - - 0.772 - - 0.784 0.858 - zgc:174906 [Source:ZFIN;Acc:ZDB-GENE-030131-6125]
30. ddx39ab ENSDARG00000015111 11619 2.395 - - - - - - 0.859 0.780 0.756 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
31. rhoaa ENSDARG00000026845 6900 2.388 0.703 - - - 0.967 - - - 0.718 ras homolog gene family, member Aa [Source:ZFIN;Acc:ZDB-GENE-040426-2150]
32. smc1al ENSDARG00000058203 8838 2.384 - - 0.770 - 0.825 - - - 0.789 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
33. msl2a ENSDARG00000038909 1357 2.375 - - - 0.777 - - 0.828 - 0.770 male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
34. IM:7163548 IM:7163548 6540 2.374 - - 0.752 0.811 - - 0.811 - -
35. kif11 ENSDARG00000010948 4973 2.359 0.788 - - - 0.855 - - - 0.716 kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
36. arpp19b ENSDARG00000039880 4823 2.354 0.778 - - - - - - 0.820 0.756 cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
37. nrarpb ENSDARG00000018958 6225 2.347 - - - 0.798 - - 0.773 - 0.776 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
38. golga7ba ENSDARG00000036295 1460 2.342 - 0.768 - - - 0.837 0.737 - - golgin A7 family, member Ba [Source:ZFIN;Acc:ZDB-GENE-050417-14]
39. znf865 ENSDARG00000036698 15532 2.34 - 0.729 - 0.806 - - 0.805 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
40. smarca5 ENSDARG00000052348 15433 2.34 - - - - 0.712 - 0.813 - 0.815 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
41. CYTH2 ENSDARG00000028800 2349 2.334 - - - - - - 0.768 0.846 0.720 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
42. sox2 ENSDARG00000070913 2763 2.328 - - 0.756 0.820 - - 0.752 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
43. ube2e1 ENSDARG00000116649 10656 2.327 - 0.773 - 0.710 0.844 - - - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
44. rtca ENSDARG00000002215 3558 2.323 - - 0.701 - - - 0.821 - 0.801 RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
45. apex1 ENSDARG00000045843 6345 2.321 - - - 0.702 0.825 - 0.794 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
46. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 2.32 - - - 0.705 - - 0.787 0.828 - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
47. sin3b ENSDARG00000062472 2025 2.318 0.755 - - - - - 0.828 - 0.735 SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
48. SSBP4 ENSDARG00000056483 5156 2.314 - - 0.752 - - 0.738 0.824 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
49. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 2.308 - - 0.773 - - - 0.749 - 0.786 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
50. sumo3a ENSDARG00000028119 13447 2.308 - - - 0.711 - - 0.810 - 0.787 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
51. hnrpl 6412 2.307 - - 0.774 - - - 0.790 - 0.743 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
52. ubr5 ENSDARG00000018192 9267 2.299 - - 0.769 - - 0.803 0.727 - - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
53. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 2.297 - - 0.763 - 0.745 - - - 0.789 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
54. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 2.297 - 0.732 - 0.757 - - 0.808 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
55. fen1 ENSDARG00000011404 3358 2.296 - - 0.783 - - - 0.793 - 0.720 flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
56. pcdh19 ENSDARG00000034344 2378 2.291 - - - 0.775 - - 0.743 - 0.773 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
57. meaf6 ENSDARG00000101216 6865 2.29 - - 0.724 0.812 - - 0.754 - - MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
58. g3bp1 ENSDARG00000017741 7622 2.283 - - - - - - 0.718 0.843 0.722 GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
59. ZNF281 ZNF281 1946 2.277 - - 0.783 - - 0.776 0.718 - -
60. kif22 ENSDARG00000102624 3694 2.272 - - 0.735 - - - 0.720 - 0.817 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
61. lypla2 ENSDARG00000053656 8971 2.272 - - - - - 0.783 0.760 - 0.729 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
62. fzd3a ENSDARG00000021664 1958 2.264 - - 0.821 - - - 0.742 - 0.701 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
63. myef2 ENSDARG00000059398 6050 2.257 - - - 0.797 - - 0.716 - 0.744 myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
64. nfil3-5 ENSDARG00000094965, ENSDARG00000113345 4657 2.256 - - 0.728 0.714 - - - - 0.814 nuclear factor, interleukin 3 regulated, member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-7677]
65. gdf11 ENSDARG00000044924 534 2.244 0.796 - - 0.730 - - - - 0.718 growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
66. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.243 - - - 0.758 - - 0.747 - 0.738 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
67. ash2l ENSDARG00000060392 4916 2.241 - 0.764 - 0.714 - - 0.763 - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
68. mxd3 ENSDARG00000098350 3040 2.24 - - - - - 0.757 0.722 - 0.761 MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
69. vezf1b ENSDARG00000061030 1410 2.234 - 0.715 0.769 - - - - - 0.750 vascular endothelial zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-060825-121]
70. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.232 - - 0.745 - - - 0.735 - 0.752 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
71. bcl11ab ENSDARG00000063153 3032 2.224 - - - 0.775 - - 0.718 - 0.731 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
72. trrap ENSDARG00000100623 3429 2.223 0.702 - - 0.744 - - - - 0.777 transformation/transcription domain-associated protein [Source:ZFIN;Acc:ZDB-GENE-050809-47]
73. cd99l2 ENSDARG00000056722 5036 2.223 - 0.729 - - - - 0.720 0.774 - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
74. kpnb3 ENSDARG00000040245 7967 2.221 - 0.712 - 0.760 - - 0.749 - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
75. ccnt1 ENSDARG00000017525 1888 2.22 - 0.704 0.812 - - - - - 0.704 cyclin T1 [Source:ZFIN;Acc:ZDB-GENE-030131-6397]
76. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 2.22 - - 0.721 - - - 0.769 - 0.730 family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
77. TAF15 ENSDARG00000070019 5102 2.213 - - 0.701 0.725 - - - - 0.787 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
78. hdac1 ENSDARG00000015427 19804 2.207 - - 0.761 - - - - 0.702 0.744 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
79. TNRC6A ENSDARG00000079688 14433 2.201 - - 0.756 - - - 0.743 0.702 - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
80. fabp7a ENSDARG00000007697 5211 2.2 0.749 - 0.708 0.743 - - - - - fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
81. si:ch211-173p18.3 ENSDARG00000035821 1917 2.196 - 0.755 0.724 - - - - - 0.717 si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
82. st8sia2 ENSDARG00000018788 2183 2.196 - - 0.735 0.722 - - 0.739 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
83. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 2.193 - 0.732 0.744 - - - 0.717 - - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
84. nup205 ENSDARG00000042530, ENSDARG00000114489 2255 2.185 - - 0.705 - - - 0.753 - 0.727 nucleoporin 205 [Source:ZFIN;Acc:ZDB-GENE-040715-8]
85. ipo7 ENSDARG00000035751 7095 2.185 - 0.742 - - - - 0.736 - 0.707 importin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-458]
86. si:ch73-46j18.5 ENSDARG00000092467 6002 2.171 - 0.754 0.701 - - - 0.716 - - si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]
87. prpf38a ENSDARG00000039213, ENSDARG00000116046 1537 2.149 - 0.729 - - - - 0.711 - 0.709 pre-mRNA processing factor 38A [Source:ZFIN;Acc:ZDB-GENE-040801-225]
88. si:ch211-288g17.3 ENSDARG00000070959 2425 2.148 - 0.714 0.728 - - - 0.706 - - si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]
89. smek1 ENSDARG00000042187 3509 2.142 - - - - - 0.706 0.725 - 0.711 SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
90. SCAF8 1618 2.124 - - - 0.713 - - 0.702 - 0.709 SR-related CTD-associated factor 8, transcript variant X3
91. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 1.741 - - - - - - - 0.882 0.859 D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
92. nkain1 ENSDARG00000006859 1961 1.708 - - - - 0.864 - 0.844 - - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
93. ek1 ENSDARG00000020080 742 1.7 - - - - - - 0.831 0.869 - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
94. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 1.691 - - - - 0.964 - 0.727 - - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
95. zdhhc15b ENSDARG00000071872 896 1.685 0.827 - - - - - - 0.858 - zinc finger, DHHC-type containing 15b [Source:ZFIN;Acc:ZDB-GENE-061110-106]
96. actl6a ENSDARG00000070828, ENSDARG00000115348 1961 1.67 - - - - - - - 0.909 0.761 actin-like 6A [Source:ZFIN;Acc:ZDB-GENE-020419-36]
97. CABZ01072954.1 CABZ01072954.1 2330 1.67 - - - - - - 0.818 0.852 -
98. hmgb2b ENSDARG00000053990 11519 1.67 - - - - - - 0.851 - 0.819 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
99. ubtf ENSDARG00000035066 4070 1.667 - - - - 0.856 - - - 0.811 upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
100. nr2f2 ENSDARG00000040926 5213 1.665 - - - - - - 0.861 0.804 - nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]

There are 1959 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA