Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tgfbr3

Gene Name Gene ID Reads Annotation
tgfbr3 ENSDARG00000099979, ENSDARG00000113424, ENSDARG00000115111 910 transforming growth factor, beta receptor III [Source:ZFIN;Acc:ZDB-GENE-120215-125]










Genes with expression patterns similar to tgfbr3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tgfbr3 ENSDARG00000099979, ENSDARG00000113424, ENSDARG00000115111 910 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transforming growth factor, beta receptor III [Source:ZFIN;Acc:ZDB-GENE-120215-125]
2. mrpl37 ENSDARG00000062916 1600 1.631 - - - - - 0.847 - 0.784 - mitochondrial ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-050309-20]
3. pard3 pard3 161 1.59 - 0.776 - - - - - 0.814 -
4. fam173b ENSDARG00000033451 513 1.537 - - - - - - - 0.777 0.760 family with sequence similarity 173, member B [Source:ZFIN;Acc:ZDB-GENE-041114-90]
5. fam46bb 601 1.535 0.791 0.744 - - - - - - - family with sequence similarity 46, member Bb
6. BX511021.1 ENSDARG00000073936 647 1.535 - 0.743 - - - - - 0.792 - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
7. lrrc20 ENSDARG00000105018 1970 1.532 - 0.827 - - - - 0.705 - - leucine rich repeat containing 20 [Source:ZFIN;Acc:ZDB-GENE-041114-49]
8. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.522 - 0.798 - - - - - - 0.724 LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
9. reep1 ENSDARG00000014854 915 1.518 - 0.716 - - - - - 0.802 - receptor accessory protein 1 [Source:ZFIN;Acc:ZDB-GENE-110411-267]
10. TCAIM ENSDARG00000079881 424 1.51 - 0.707 - - - - - 0.803 - T cell activation inhibitor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-160113-67]
11. sorbs1 ENSDARG00000103435 2297 1.509 - 0.799 - - - - 0.710 - - sorbin and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-168]
12. ddx56 ENSDARG00000020913 1070 1.505 - - - - - 0.734 - 0.771 - DEAD (Asp-Glu-Ala-Asp) box helicase 56 [Source:ZFIN;Acc:ZDB-GENE-040825-3]
13. slc27a1a ENSDARG00000006240, ENSDARG00000109799 1471 1.5 - - - - - 0.736 0.764 - - solute carrier family 27 (fatty acid transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050320-112]
14. ehd1b ENSDARG00000014793, ENSDARG00000110243, ENSDARG00000110919 2496 1.492 - 0.760 - - - - 0.732 - - EH-domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2069]
15. ck2a2a ck2a2a 1695 1.47 - - - - - 0.757 - 0.713 -
16. pno1 ENSDARG00000008502 4547 1.468 - - - - - - 0.755 0.713 - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
17. zgc:92907 ENSDARG00000011026 986 1.467 - - - - - 0.755 0.712 - - zgc:92907 [Source:ZFIN;Acc:ZDB-GENE-040718-161]
18. rnf213b ENSDARG00000103551 63 1.456 - - - - - 0.709 - - 0.747 ring finger protein 213b [Source:ZFIN;Acc:ZDB-GENE-110822-1]
19. ntmt1 ENSDARG00000022399 5779 1.452 - 0.731 - - - - 0.721 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
20. plcd3b ENSDARG00000079572 64 1.444 - 0.738 - - - 0.706 - - - phospholipase C, delta 3b [Source:ZFIN;Acc:ZDB-GENE-081222-2]
21. mtdhb ENSDARG00000004939 1225 1.442 - 0.720 - - - - - 0.722 - metadherin b [Source:ZFIN;Acc:ZDB-GENE-090929-2]
22. tgm1l1 ENSDARG00000102106 1437 1.438 - 0.732 - - - - 0.706 - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
23. mtor ENSDARG00000053196 2156 1.427 - - - - - 0.718 0.709 - - mechanistic target of rapamycin kinase [Source:ZFIN;Acc:ZDB-GENE-030131-2974]
24. hspb2 ENSDARG00000052450, ENSDARG00000114010 139 0.922 - - - - - 0.922 - - - heat shock protein, alpha-crystallin-related, b2 [Source:ZFIN;Acc:ZDB-GENE-050417-260]
25. hoxb4a ENSDARG00000013533 3857 0.914 - 0.914 - - - - - - - homeobox B4a [Source:ZFIN;Acc:ZDB-GENE-990415-105]
26. klhl21 ENSDARG00000039255 2550 0.873 - 0.873 - - - - - - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
27. chchd6b ENSDARG00000045978 251 0.872 - 0.872 - - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-041114-95]
28. zgc:101663 ENSDARG00000037852 830 0.861 - - - - - - - 0.861 - zgc:101663 [Source:ZFIN;Acc:ZDB-GENE-041114-149]
29. fam120c ENSDARG00000019205 1365 0.855 - 0.855 - - - - - - - family with sequence similarity 120C [Source:ZFIN;Acc:ZDB-GENE-090313-228]
30. mcamb ENSDARG00000005368 1660 0.854 - 0.854 - - - - - - - melanoma cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030219-213]
31. ZNF70_11 ZNF70_11 1246 0.853 - - - - - - - 0.853 -
32. CCRN4L CCRN4L 518 0.852 - 0.852 - - - - - - -
33. ppm1la ENSDARG00000063218 2142 0.85 - 0.850 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
34. azin1a ENSDARG00000052789 387 0.85 - - - - - 0.850 - - - antizyme inhibitor 1a [Source:ZFIN;Acc:ZDB-GENE-050417-20]
35. timm10 ENSDARG00000069116 4459 0.845 - - - - - - - 0.845 - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
36. igsf11 ENSDARG00000109783 520 0.845 - 0.845 - - - - - - - immunoglobulin superfamily member 11 [Source:ZFIN;Acc:ZDB-GENE-080303-21]
37. setx ENSDARG00000022996 385 0.845 - - - - - - - 0.845 - senataxin [Source:ZFIN;Acc:ZDB-GENE-070402-1]
38. mfap2 ENSDARG00000059367 3774 0.844 - - - - - - 0.844 - - microfibril associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6710]
39. lrrc39 ENSDARG00000071465, ENSDARG00000116738 349 0.84 - - - - - - - 0.840 - leucine rich repeat containing 39 [Source:ZFIN;Acc:ZDB-GENE-050417-279]
40. nr1d2a ENSDARG00000003820 452 0.838 - 0.838 - - - - - - - nuclear receptor subfamily 1, group D, member 2a [Source:ZFIN;Acc:ZDB-GENE-040504-1]
41. adora1 adora1 149 0.835 - - - - - - - 0.835 -
42. ALPK1 195 0.832 - - - - - - - 0.832 - alpha-kinase 1
43. xrcc6bp1 662 0.832 - - - - - - - 0.832 - XRCC6 binding protein 1
44. pdxka ENSDARG00000088959 217 0.83 - - - - - - - 0.830 - pyridoxal (pyridoxine, vitamin B6) kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8376]
45. phb ENSDARG00000057414 9551 0.83 - - - - - - 0.830 - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
46. eif3jb ENSDARG00000053370 1776 0.829 - - - - - - 0.829 - - eukaryotic translation initiation factor 3, subunit Jb [Source:ZFIN;Acc:ZDB-GENE-040426-2900]
47. tiprl ENSDARG00000032353 1045 0.828 - - - - - - - 0.828 - TIP41, TOR signaling pathway regulator-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1611]
48. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 0.828 - - - - - - - 0.828 - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
49. adamts10 ENSDARG00000075188 225 0.826 - 0.826 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 10 [Source:ZFIN;Acc:ZDB-GENE-081104-414]
50. enosf1 ENSDARG00000038359 209 0.826 - - - - - - - 0.826 - enolase superfamily member 1 [Source:ZFIN;Acc:ZDB-GENE-060929-780]
51. nop10 ENSDARG00000104227 2463 0.826 - - - - - - 0.826 - - NOP10 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-041007-4]
52. gne ENSDARG00000099771 617 0.826 - 0.826 - - - - - - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1848]
53. CIT CIT 212 0.825 - - - - - - - 0.825 -
54. zgc:55461 ENSDARG00000116706, ENSDARG00000117112 2835 0.825 - 0.825 - - - - - - - zgc:55461 [Source:ZFIN;Acc:ZDB-GENE-040426-2879]
55. commd1 ENSDARG00000031203 340 0.823 - - - - - - - 0.823 - copper metabolism (Murr1) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060512-329]
56. APOLD1_1 APOLD1_1 590 0.823 - - - - - 0.823 - - -
57. limch1b ENSDARG00000103774 1087 0.822 - 0.822 - - - - - - - LIM and calponin homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9210]
58. atp5ia 4773 0.822 - - - - - - 0.822 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Ea
59. CU972452.1 CU972452.1 1046 0.821 - 0.821 - - - - - - -
60. camk2d1 ENSDARG00000043010 669 0.821 - - - - - - - 0.821 - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1 [Source:ZFIN;Acc:ZDB-GENE-040801-121]
61. limch1a ENSDARG00000074275 2981 0.821 - 0.821 - - - - - - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
62. CABZ01080599.2 CABZ01080599.2 192 0.82 - - - - - - - 0.820 -
63. BX530018.3 ENSDARG00000107022 614 0.819 - 0.819 - - - - - - -
64. cluh cluh 3851 0.819 - - - - - 0.819 - - -
65. fgf12a ENSDARG00000027957 143 0.818 - - - - - - - 0.818 - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
66. ponzr1 ENSDARG00000090444 540 0.816 - - - - - - - 0.816 - plac8 onzin related protein 1 [Source:ZFIN;Acc:ZDB-GENE-070727-1]
67. morn5 ENSDARG00000033610, ENSDARG00000110509 21 0.816 - 0.816 - - - - - - - MORN repeat containing 5 [Source:ZFIN;Acc:ZDB-GENE-050522-267]
68. zgc:174877 ENSDARG00000079278 143 0.815 - - - - - - - 0.815 - zgc:174877 [Source:ZFIN;Acc:ZDB-GENE-041008-66]
69. smarcd2 ENSDARG00000088877 416 0.815 - - - - - - - 0.815 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
70. mea1 ENSDARG00000039820 589 0.815 - - - - - - - 0.815 - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
71. slc25a23a ENSDARG00000005690 824 0.814 - - - - - - - 0.814 - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23a [Source:ZFIN;Acc:ZDB-GENE-121214-154]
72. pcf11 ENSDARG00000044625, ENSDARG00000114082 1885 0.814 - - - - - 0.814 - - - PCF11, cleavage and polyadenylation factor subunit [Source:ZFIN;Acc:ZDB-GENE-041114-175]
73. adh5 ENSDARG00000080010, ENSDARG00000111574 4980 0.814 - - - - - - 0.814 - - alcohol dehydrogenase 5 [Source:ZFIN;Acc:ZDB-GENE-011003-1]
74. phf6 ENSDARG00000004046, ENSDARG00000115639 925 0.814 - - - - - - - 0.814 - PHD finger protein 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5278]
75. bola1 ENSDARG00000039915 658 0.814 - - - - - - - 0.814 - bolA family member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-76]
76. zgc:158257 831 0.814 - - - - - - 0.814 - - zgc:158257
77. naa50 ENSDARG00000027825, ENSDARG00000116858 3221 0.813 - - - - - - 0.813 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-142]
78. rassf1 ENSDARG00000004840 1248 0.813 - - - - - 0.813 - - - Ras association (RalGDS/AF-6) domain family 1 [Source:ZFIN;Acc:ZDB-GENE-040912-14]
79. ENSDARG00000029117 ENSDARG00000029117 80 0.813 - - - - - - - 0.813 -
80. usp4 ENSDARG00000014770 1684 0.813 - - - - - - - 0.813 - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
81. git2a ENSDARG00000061915 884 0.812 - - - - - - - 0.812 - G protein-coupled receptor kinase interacting ArfGAP 2a [Source:ZFIN;Acc:ZDB-GENE-060526-267]
82. heatr3 ENSDARG00000036076 944 0.812 - - - - - - - 0.812 - HEAT repeat containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1876]
83. stac3 ENSDARG00000098883 1765 0.812 - 0.812 - - - - - - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
84. apc ENSDARG00000058868 2605 0.812 - 0.812 - - - - - - - adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
85. tarsl2 ENSDARG00000092774 505 0.812 - - - - - - - 0.812 - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
86. ctps1a ENSDARG00000030700 3868 0.811 - - - - - - - 0.811 - CTP synthase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-808]
87. pars2 ENSDARG00000044404, ENSDARG00000109425 271 0.811 - - - - - - - 0.811 - prolyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-4219]
88. ANGPT4 ENSDARG00000076787 140 0.811 - - - - - - - 0.811 - angiopoietin 4 [Source:ZFIN;Acc:ZDB-GENE-110104-1]
89. ak4 ENSDARG00000006546 1528 0.811 - - - - - - - 0.811 - adenylate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2505]
90. nrxn2b ENSDARG00000063150 343 0.811 - - - - - - - 0.811 - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
91. sra1 ENSDARG00000053619 2799 0.811 - - - - - - 0.811 - - steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
92. CU928083.1 ENSDARG00000097907 1279 0.81 - 0.810 - - - - - - -
93. GDPD4_1 GDPD4_1 190 0.81 - - - - - - - 0.810 -
94. LRRC29 ENSDARG00000076425 284 0.81 - 0.810 - - - - - - - leucine rich repeat containing 29 [Source:ZFIN;Acc:ZDB-GENE-030131-7165]
95. CR559945.3 CR559945.3 1029 0.81 - - - - - - - 0.810 -
96. TTF1_4 TTF1_4 504 0.81 - - - - - - - 0.810 -
97. ERRFI1 ERRFI1 664 0.809 - 0.809 - - - - - - -
98. RBM12B ENSDARG00000079717 541 0.809 - - - - - - - 0.809 - RNA binding motif protein 12B [Source:ZFIN;Acc:ZDB-GENE-030131-6428]
99. ankdd1b ENSDARG00000025866 51 0.809 - - - - - - - 0.809 - ankyrin repeat and death domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060526-136]
100. ly75 ENSDARG00000053113 196 0.809 - - - - - - - 0.809 - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]

There are 845 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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