Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tgfb3

Gene Name Gene ID Reads Annotation
tgfb3 ENSDARG00000019367 2327 transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]










Genes with expression patterns similar to tgfb3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tgfb3 ENSDARG00000019367 2327 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]
2. ntla ntla 926 3.336 0.788 - - - - 0.912 0.832 - 0.804
3. shha ENSDARG00000068567, ENSDARG00000111447 1497 2.657 0.860 - - - - 0.931 0.866 - - sonic hedgehog a [Source:ZFIN;Acc:ZDB-GENE-980526-166]
4. ctgfa ENSDARG00000042934, ENSDARG00000112741 2123 2.566 0.827 - - - - 0.825 0.914 - - connective tissue growth factor a [Source:ZFIN;Acc:ZDB-GENE-030131-102]
5. PAQR4 PAQR4 2150 2.546 - - - - - 0.905 0.873 - 0.768
6. CABZ01044297.1 CABZ01044297.1 2015 2.538 0.767 - - - - 0.931 0.840 - -
7. plod2 ENSDARG00000011821 1656 2.53 0.736 - - - - 0.930 0.864 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
8. mmp23bb ENSDARG00000009825 133 2.526 0.765 - - - - 0.935 0.826 - - matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448]
9. epyc ENSDARG00000056950 7783 2.496 0.711 - - - - 0.932 0.853 - - epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
10. chad ENSDARG00000045071 903 2.495 0.741 - - - - 0.874 0.880 - - chondroadherin [Source:ZFIN;Acc:ZDB-GENE-040426-1130]
11. susd5 ENSDARG00000088277 439 2.488 0.812 - - - - 0.899 0.777 - - sushi domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-120215-196]
12. BX323459.1 ENSDARG00000109508 1476 2.467 0.835 - - - - 0.774 0.858 - -
13. col27a1a 1747 2.463 - - - - - 0.891 0.871 - 0.701 collagen, type XXVII, alpha 1a
14. plod1a ENSDARG00000059746 3364 2.41 - - - - - 0.919 0.789 - 0.702 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3165]
15. FRMD5 ENSDARG00000075942 569 2.227 0.732 - - - - 0.725 0.770 - - FERM domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28214]
16. plcl1 ENSDARG00000067676 2457 1.791 - - - - - 0.909 0.882 - - phospholipase C like 1 [Source:ZFIN;Acc:ZDB-GENE-090313-194]
17. trim63 trim63 2437 1.776 - 0.982 - - - - 0.794 - -
18. slc6a8 ENSDARG00000043646 1114 1.77 - 0.986 - - - - 0.784 - - solute carrier family 6 (neurotransmitter transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-071024-2]
19. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 1.768 - 0.997 - - - - 0.771 - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
20. ak3 ENSDARG00000058226 3160 1.763 - 0.970 - - - - - - 0.793 adenylate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2142]
21. cxcl12a ENSDARG00000037116 5433 1.751 - 0.984 - - - - 0.767 - - chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030318-1]
22. ntd5 ENSDARG00000040944 4988 1.747 - - - - - 0.864 0.883 - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
23. carhsp1 ENSDARG00000053129 2100 1.744 - 0.984 - - - - - 0.760 - calcium regulated heat stable protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1479]
24. si:dkeyp-12a9.5 3058 1.743 - - - - - 0.904 0.839 - - si:dkeyp-12a9.5
25. glsb ENSDARG00000040705 1439 1.742 - 0.995 - - - - - - 0.747 glutaminase b [Source:ZFIN;Acc:ZDB-GENE-030616-550]
26. olfm2a ENSDARG00000077847 230 1.735 - 0.997 - 0.738 - - - - - olfactomedin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2882]
27. CR293507.1 ENSDARG00000112572 3198 1.733 - 0.997 - - - - - - 0.736
28. col9a3 ENSDARG00000037845 6564 1.728 - - - - - 0.870 0.858 - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
29. si:ch211-129c21.1 ENSDARG00000024775 371 1.723 - 0.996 - - - - - - 0.727 si:ch211-129c21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5796]
30. tppp3 ENSDARG00000030463 992 1.721 - - - - - 0.818 0.903 - - tubulin polymerization-promoting protein family member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1909]
31. sox9a ENSDARG00000003293 812 1.711 - - - - - 0.878 0.833 - - SRY (sex determining region Y)-box 9a [Source:ZFIN;Acc:ZDB-GENE-001103-1]
32. acana ENSDARG00000035891 118 1.711 - - - - - 0.870 0.841 - - aggrecan a [Source:ZFIN;Acc:ZDB-GENE-050208-221]
33. maea ENSDARG00000053691 1840 1.709 - 0.992 - - - - - - 0.717 macrophage erythroblast attacher [Source:ZFIN;Acc:ZDB-GENE-030131-294]
34. tgfbi ENSDARG00000071586 17779 1.703 - - - - - 0.895 0.808 - - transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
35. pdia5 ENSDARG00000069242 3576 1.698 - 0.987 - - - - - 0.711 - protein disulfide isomerase family A, member 5 [Source:ZFIN;Acc:ZDB-GENE-030521-5]
36. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 1.695 - 0.985 - - - - - - 0.710 ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
37. COBLL1_1 COBLL1_1 787 1.692 - - - - - 0.883 0.809 - -
38. CABZ01079764.1 CABZ01079764.1 12103 1.685 - - - - - 0.867 0.818 - -
39. epn2 ENSDARG00000008377 5458 1.684 - 0.866 - - - - - - 0.818 epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
40. LRRC29 ENSDARG00000076425 284 1.684 - - - - - 0.871 0.813 - - leucine rich repeat containing 29 [Source:ZFIN;Acc:ZDB-GENE-030131-7165]
41. hoxa10b ENSDARG00000031337 3992 1.679 - 0.975 - - - - - 0.704 - homeobox A10b [Source:ZFIN;Acc:ZDB-GENE-990415-97]
42. hhip ENSDARG00000060397, ENSDARG00000111482, ENSDARG00000111668 3025 1.678 - - - - - 0.816 0.862 - - hedgehog interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4827]
43. matn3b ENSDARG00000069265 856 1.669 - - - - - 0.924 0.745 - - matrilin 3b [Source:ZFIN;Acc:ZDB-GENE-050221-9]
44. flncb ENSDARG00000018820 5595 1.668 - 0.880 - - - - 0.788 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
45. clu ENSDARG00000010434 498 1.668 0.802 - - - - 0.866 - - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
46. BX842614.2 BX842614.2 799 1.667 - - - - - 0.864 0.803 - -
47. pi15a ENSDARG00000045378 2361 1.665 - - - - - 0.841 0.824 - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
48. zgc:113232 ENSDARG00000040118, ENSDARG00000116977 5865 1.649 0.729 - - - - 0.920 - - - zgc:113232 [Source:ZFIN;Acc:ZDB-GENE-050327-86]
49. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.646 - 0.935 - - - - 0.711 - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
50. sncga ENSDARG00000034423, ENSDARG00000112260 5469 1.643 - - - - - 0.815 0.828 - - synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
51. cthrc1a ENSDARG00000087198 1001 1.641 - - - - - 0.841 0.800 - - collagen triple helix repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-040808-22]
52. COLGALT2 ENSDARG00000014670 63 1.634 - - - - - 0.802 0.832 - - collagen beta(1-O)galactosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070222-1]
53. sult6b1 ENSDARG00000086826 2070 1.633 - - - - - - - 0.810 0.823 sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
54. IGSF10 ENSDARG00000077497 317 1.633 - - - - - 0.883 0.750 - - immunoglobulin superfamily, member 10 [Source:ZFIN;Acc:ZDB-GENE-130530-827]
55. sgcd ENSDARG00000098573 4980 1.632 - 0.929 - - - - 0.703 - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
56. fam46bb 601 1.63 - - - - - 0.811 0.819 - - family with sequence similarity 46, member Bb
57. mtif2 ENSDARG00000063213, ENSDARG00000113856 377 1.627 0.755 - - - - 0.872 - - - mitochondrial translational initiation factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1092]
58. CU972452.1 CU972452.1 1046 1.627 - - - - - 0.821 0.806 - -
59. cyr61l2 ENSDARG00000099985 725 1.623 0.842 - - - - - - 0.781 - cysteine-rich, angiogenic inducer, 61 like 2 [Source:ZFIN;Acc:ZDB-GENE-060404-5]
60. zgc:86725 2559 1.622 0.858 - - - - 0.764 - - - zgc:86725
61. si:dkeyp-118a3.2 ENSDARG00000086957 2106 1.619 - - - - - 0.786 0.833 - - si:dkeyp-118a3.2 [Source:ZFIN;Acc:ZDB-GENE-060810-149]
62. nkx3.2 ENSDARG00000037639 575 1.618 - - - - - 0.776 0.842 - - NK3 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030127-1]
63. ism1 ENSDARG00000020541 1241 1.61 - - - - - 0.860 0.750 - - isthmin 1 [Source:ZFIN;Acc:ZDB-GENE-050523-3]
64. ucmab ENSDARG00000005485 1808 1.605 0.725 - - - - 0.880 - - - upper zone of growth plate and cartilage matrix associated b [Source:ZFIN;Acc:ZDB-GENE-040426-2368]
65. srpx ENSDARG00000010318 946 1.604 - - - - - - 0.795 0.809 - sushi-repeat containing protein X-linked [Source:ZFIN;Acc:ZDB-GENE-050327-43]
66. loxl5b ENSDARG00000076904 468 1.6 - - - - - 0.812 0.788 - - lysyl oxidase-like 5b [Source:ZFIN;Acc:ZDB-GENE-070818-3]
67. CR847510.1 CR847510.1 629 1.598 - - - - - 0.787 0.811 - -
68. CR792456.1 CR792456.1 783 1.597 - - - - - 0.842 0.755 - -
69. zgc:194470 zgc:194470 210 1.596 - - - - - 0.846 - 0.750 -
70. pabpc4 ENSDARG00000059259, ENSDARG00000111312 2392 1.585 - 0.847 - - - - 0.738 - - poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]
71. ryr3 ENSDARG00000071331 6795 1.583 - - - - - 0.807 0.776 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
72. CR450814.3 CR450814.3 608 1.581 - - - - - 0.870 0.711 - -
73. PLXDC2 ENSDARG00000059950 220 1.572 0.755 - - - - 0.817 - - - plexin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-140106-69]
74. CU302436.1 ENSDARG00000114500 1619 1.571 0.770 - - - - - 0.801 - - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
75. si:ch211-152c2.3 ENSDARG00000045898 3448 1.571 - - - - - 0.760 0.811 - - si:ch211-152c2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9914]
76. UTS2R 109 1.571 0.760 - - - - - 0.811 - - urotensin 2 receptor
77. tbcb ENSDARG00000068404, ENSDARG00000109716 5098 1.566 - 0.830 - - - - - - 0.736 tubulin folding cofactor B [Source:ZFIN;Acc:ZDB-GENE-030131-9296]
78. emilin3a ENSDARG00000078052 1652 1.565 0.862 - - 0.703 - - - - - elastin microfibril interfacer 3a [Source:ZFIN;Acc:ZDB-GENE-080612-2]
79. CABZ01039859.1 ENSDARG00000076361 540 1.562 - - - - - - - 0.750 0.812 beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
80. alpk3a ENSDARG00000078989 1992 1.561 - - - - - 0.855 0.706 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
81. myhc4 ENSDARG00000035438 1322 1.558 - - - - - 0.758 0.800 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
82. prss12 ENSDARG00000061830 593 1.557 - - - - - - 0.827 - 0.730 serine protease 12 [Source:ZFIN;Acc:ZDB-GENE-090313-45]
83. ntn1b ENSDARG00000022531 248 1.545 0.786 - - - - 0.759 - - - netrin 1b [Source:ZFIN;Acc:ZDB-GENE-990415-168]
84. ppapdc3 ppapdc3 4924 1.543 - - - - - 0.769 0.774 - -
85. mxra8a ENSDARG00000062222 530 1.542 - - - - - 0.832 0.710 - - matrix-remodelling associated 8a [Source:ZFIN;Acc:ZDB-GENE-060503-671]
86. smpx ENSDARG00000045302 2175 1.539 - - - - - 0.737 0.802 - - small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
87. col9a2 ENSDARG00000024492 20234 1.537 0.749 - - - - 0.788 - - - procollagen, type IX, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9786]
88. ptch2 ENSDARG00000055026 980 1.536 0.731 - - - - - 0.805 - - patched 2 [Source:ZFIN;Acc:ZDB-GENE-980526-44]
89. BX470254.1 ENSDARG00000097402 1389 1.533 - - - - - 0.778 0.755 - -
90. ehd2 ehd2 1089 1.532 - - - - - 0.802 0.730 - -
91. GJD4 ENSDARG00000116895 139 1.527 0.787 - - - - 0.740 - - - gap junction protein delta 4 [Source:HGNC Symbol;Acc:HGNC:23296]
92. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.527 - - - - - 0.777 - - 0.750 ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
93. sptb ENSDARG00000030490 7128 1.523 - - - - - 0.757 0.766 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
94. crip2 ENSDARG00000070670 4844 1.521 - - - - - 0.735 0.786 - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
95. cyr61l1 ENSDARG00000035422, ENSDARG00000112039, ENSDARG00000114683 332 1.516 - - - - - 0.740 0.776 - - cysteine-rich, angiogenic inducer 61 like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-136]
96. cyr61 ENSDARG00000023062 1213 1.513 - - - - - 0.722 - - 0.791 cysteine-rich, angiogenic inducer, 61 [Source:ZFIN;Acc:ZDB-GENE-040426-3]
97. SLC35A2 ENSDARG00000058990 289 1.513 - - - - - 0.718 - 0.795 - solute carrier family 35 (UDP-galactose transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030616-62]
98. tpst1l ENSDARG00000044513 1339 1.512 - - - - - - 0.711 - 0.801 tyrosylprotein sulfotransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-040316-1]
99. tnnc1b ENSDARG00000037539 13945 1.512 - - - - - 0.706 0.806 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
100. jph1a ENSDARG00000058603 2852 1.508 - - - - - 0.746 0.762 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]

There are 1418 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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