Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tgfb1b

Gene Name Gene ID Reads Annotation
tgfb1b ENSDARG00000034895 608 transforming growth factor, beta 1b [Source:ZFIN;Acc:ZDB-GENE-091028-1]










Genes with expression patterns similar to tgfb1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tgfb1b ENSDARG00000034895 608 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transforming growth factor, beta 1b [Source:ZFIN;Acc:ZDB-GENE-091028-1]
2. sox18 ENSDARG00000058598 678 1.775 0.900 0.875 - - - - - - - SRY (sex determining region Y)-box 18 [Source:ZFIN;Acc:ZDB-GENE-080725-1]
3. nol12 ENSDARG00000038027 2288 1.764 - - - 0.997 - - 0.767 - - nucleolar protein 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1035]
4. chga ENSDARG00000008829 1086 1.763 - 0.764 - 0.999 - - - - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
5. si:dkey-156k2.6 si:dkey-156k2.6 848 1.751 - - - 0.999 - 0.752 - - -
6. kdm6bb ENSDARG00000056929 4807 1.738 - 0.747 - 0.991 - - - - - lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
7. slc6a4a ENSDARG00000061165 206 1.735 0.923 - - - 0.812 - - - - solute carrier family 6 (neurotransmitter transporter), member 4a [Source:ZFIN;Acc:ZDB-GENE-060314-1]
8. ctssa ctssa 24 1.724 0.868 - - - - 0.856 - - -
9. gpr182 ENSDARG00000036616 455 1.692 0.955 0.737 - - - - - - - G protein-coupled receptor 182 [Source:ZFIN;Acc:ZDB-GENE-030131-2361]
10. crfb4 ENSDARG00000068711 51 1.634 - - - - 0.778 0.856 - - - cytokine receptor family member b4 [Source:ZFIN;Acc:ZDB-GENE-070905-3]
11. SLC28A2 SLC28A2 21 1.602 0.766 - - - - 0.836 - - -
12. arid5a ENSDARG00000077120 26 1.601 0.766 - - - - 0.835 - - - AT rich interactive domain 5A (MRF1-like) [Source:ZFIN;Acc:ZDB-GENE-100525-3]
13. zgc:110782 ENSDARG00000044544 48 1.595 0.739 - - - - 0.856 - - - zgc:110782 [Source:ZFIN;Acc:ZDB-GENE-050320-51]
14. nrros ENSDARG00000071491, ENSDARG00000112102 64 1.593 0.766 0.827 - - - - - - - negative regulator of reactive oxygen species [Source:ZFIN;Acc:ZDB-GENE-040808-36]
15. si:ch73-338a16.3 ENSDARG00000101159 18 1.583 0.868 - - - - 0.715 - - - si:ch73-338a16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-227]
16. tdrd9 ENSDARG00000013453 22 1.567 - 0.725 - - - 0.842 - - - tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
17. cox5b2 ENSDARG00000068738 182 1.565 - 0.814 - - - - 0.751 - - cytochrome c oxidase subunit 5B2 [Source:ZFIN;Acc:ZDB-GENE-060825-71]
18. zgc:73226 ENSDARG00000023759 120 1.56 - - - - 0.738 - 0.822 - - zgc:73226 [Source:ZFIN;Acc:ZDB-GENE-050703-8]
19. si:ch211-260m19.8 si:ch211-260m19.8 33 1.56 - 0.704 - - - 0.856 - - -
20. cpne2 ENSDARG00000007753 206 1.554 - - - - - 0.734 0.820 - - copine II [Source:ZFIN;Acc:ZDB-GENE-030131-7896]
21. NFRKB ENSDARG00000091512 646 1.545 - 0.802 - - - - 0.743 - - nuclear factor related to kappaB binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6419]
22. zgc:113426 ENSDARG00000051793 37 1.542 0.806 - - - - 0.736 - - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]
23. si:dkey-261h17.1 ENSDARG00000095268 11403 1.534 0.772 - - - - - 0.762 - - si:dkey-261h17.1 [Source:ZFIN;Acc:ZDB-GENE-030829-14]
24. mpx ENSDARG00000019521 562 1.514 0.766 - - - - - 0.748 - - myeloid-specific peroxidase [Source:ZFIN;Acc:ZDB-GENE-030131-9460]
25. gpr39 ENSDARG00000102888 46 1.512 0.766 0.746 - - - - - - - G protein-coupled receptor 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1395]
26. stab1 ENSDARG00000076484 717 1.501 0.780 - - - - - 0.721 - - stabilin 1 [Source:ZFIN;Acc:ZDB-GENE-050208-554]
27. BX571880.1 ENSDARG00000097533 499 1.501 0.766 0.735 - - - - - - -
28. aqp8b ENSDARG00000089749 108 1.492 0.757 - - - - - 0.735 - - aquaporin 8b [Source:ZFIN;Acc:ZDB-GENE-080220-47]
29. CT573239.1 ENSDARG00000105292 247 1.473 0.722 0.751 - - - - - - - si:ch73-112j3.1 [Source:NCBI gene;Acc:101883515]
30. ccdc88b ENSDARG00000076189 123 1.471 - 0.761 - - - - 0.710 - - coiled-coil domain containing 88B [Source:ZFIN;Acc:ZDB-GENE-080303-31]
31. CU013533.1 CU013533.1 108 1.466 0.766 - - - 0.700 - - - -
32. si:ch211-279m15.1 si:ch211-279m15.1 67 1.465 - - - - 0.741 0.724 - - -
33. CCDC134 CCDC134 477 1.462 - 0.716 - - 0.746 - - - -
34. fzd5 ENSDARG00000025420 1082 1.453 - 0.739 - - - - 0.714 - - frizzled class receptor 5 [Source:ZFIN;Acc:ZDB-GENE-990415-218]
35. si:ch73-61d6.3 ENSDARG00000057826 274 1.417 0.701 - - - - - 0.716 - - si:ch73-61d6.3 [Source:ZFIN;Acc:ZDB-GENE-091204-109]
36. gpatch1 ENSDARG00000033418 1349 1 - - - 1.000 - - - - - G patch domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040914-65]
37. si:dkeyp-82h4.2 si:dkeyp-82h4.2 494 1 - - - 1.000 - - - - -
38. ccdc102a ENSDARG00000003872 791 1 - - - 1.000 - - - - - coiled-coil domain containing 102A [Source:ZFIN;Acc:ZDB-GENE-030131-4044]
39. WNK2 ENSDARG00000104989 429 1 - - - 1.000 - - - - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
40. zgc:173702 ENSDARG00000110229 411 1 - - - 1.000 - - - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
41. AL954698.1 ENSDARG00000098202 377 1 - - - 1.000 - - - - -
42. snx18a ENSDARG00000067713, ENSDARG00000109647 765 1 - - - 1.000 - - - - - sorting nexin 18a [Source:ZFIN;Acc:ZDB-GENE-070705-339]
43. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 0.999 - - - 0.999 - - - - - insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
44. rhoua ENSDARG00000019709 1506 0.999 - - - 0.999 - - - - - ras homolog family member Ua [Source:ZFIN;Acc:ZDB-GENE-040618-3]
45. nr1d2b ENSDARG00000009594 1144 0.999 - - - 0.999 - - - - - nuclear receptor subfamily 1, group D, member 2b [Source:ZFIN;Acc:ZDB-GENE-990415-244]
46. prkrip1 ENSDARG00000033126, ENSDARG00000113803 1634 0.999 - - - 0.999 - - - - - PRKR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-111011-2]
47. si:ch211-155e24.3 ENSDARG00000105127 972 0.999 - - - 0.999 - - - - - si:ch211-155e24.3 [Source:ZFIN;Acc:ZDB-GENE-070912-116]
48. unc5b ENSDARG00000033327 3432 0.999 - - - 0.999 - - - - - unc-5 netrin receptor B [Source:ZFIN;Acc:ZDB-GENE-041213-1]
49. tsen2 ENSDARG00000091851 1467 0.999 - - - 0.999 - - - - - TSEN2 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-060929-918]
50. fam122b ENSDARG00000036500, ENSDARG00000116582 1408 0.999 - - - 0.999 - - - - - family with sequence similarity 122B [Source:ZFIN;Acc:ZDB-GENE-040801-204]
51. SNORA2 SNORA2 486 0.999 - - - 0.999 - - - - -
52. BX323459.1 ENSDARG00000109508 1476 0.999 - - - 0.999 - - - - -
53. phf6 ENSDARG00000004046, ENSDARG00000115639 925 0.999 - - - 0.999 - - - - - PHD finger protein 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5278]
54. lrrtm1 ENSDARG00000052713 1041 0.999 - - - 0.999 - - - - - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
55. rb1 ENSDARG00000006782 1445 0.998 - - - 0.998 - - - - - retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
56. fam102bb ENSDARG00000002333 1483 0.998 - - - 0.998 - - - - - family with sequence similarity 102, member B, b [Source:ZFIN;Acc:ZDB-GENE-041014-330]
57. mcrs1 ENSDARG00000020840 3232 0.998 - - - 0.998 - - - - - microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
58. sirt6 ENSDARG00000102963 766 0.998 - - - 0.998 - - - - - sirtuin 6 [Source:ZFIN;Acc:ZDB-GENE-031007-2]
59. si:ch73-52f15.5 ENSDARG00000095400 1368 0.998 - - - 0.998 - - - - - si:ch73-52f15.5 [Source:ZFIN;Acc:ZDB-GENE-091204-341]
60. sept5a ENSDARG00000013843 1206 0.998 - - - 0.998 - - - - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
61. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 0.997 - - - 0.997 - - - - - transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
62. cdkal1 ENSDARG00000104848 2102 0.997 - - - 0.997 - - - - - CDK5 regulatory subunit associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1443]
63. polr1a ENSDARG00000098375 1224 0.997 - - - 0.997 - - - - - RNA polymerase I subunit A [Source:ZFIN;Acc:ZDB-GENE-030131-5286]
64. nop2 ENSDARG00000043304 2511 0.997 - - - 0.997 - - - - - NOP2 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050309-7]
65. zgc:101744 ENSDARG00000038694 2857 0.996 - - - 0.996 - - - - - zgc:101744 [Source:ZFIN;Acc:ZDB-GENE-050320-111]
66. nelfb ENSDARG00000035505 1337 0.996 - - - 0.996 - - - - - negative elongation factor complex member B [Source:ZFIN;Acc:ZDB-GENE-040426-765]
67. dnttip2 ENSDARG00000057648 2381 0.996 - - - 0.996 - - - - - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
68. polr3e ENSDARG00000037358 1864 0.996 - - - 0.996 - - - - - polymerase (RNA) III (DNA directed) polypeptide E [Source:ZFIN;Acc:ZDB-GENE-030131-8462]
69. tox4 tox4 1671 0.996 - - - 0.996 - - - - -
70. PPP1R8 PPP1R8 1897 0.996 - - - 0.996 - - - - -
71. sh3gl3a ENSDARG00000013360 3602 0.996 - - - 0.996 - - - - - SH3-domain GRB2-like 3a [Source:ZFIN;Acc:ZDB-GENE-070112-242]
72. PACS1_1 PACS1_1 1264 0.996 - - - 0.996 - - - - -
73. parn ENSDARG00000102634 2049 0.996 - - - 0.996 - - - - - poly(A)-specific ribonuclease (deadenylation nuclease) [Source:ZFIN;Acc:ZDB-GENE-040426-880]
74. sh3bp5lb 1090 0.996 - - - 0.996 - - - - - SH3-binding domain protein 5-like, b
75. kif3b ENSDARG00000101120 1158 0.995 - - - 0.995 - - - - - kinesin family member 3B [Source:ZFIN;Acc:ZDB-GENE-050119-3]
76. CD99L2 ENSDARG00000056722 5588 0.995 - - - 0.995 - - - - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
77. ccnl1a ENSDARG00000055124, ENSDARG00000116311 2174 0.995 - - - 0.995 - - - - - cyclin L1a [Source:ZFIN;Acc:ZDB-GENE-050419-206]
78. cpsf5 cpsf5 1841 0.995 - - - 0.995 - - - - -
79. dap3 ENSDARG00000078500 2724 0.995 - - - 0.995 - - - - - death associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-051129-2]
80. zic4 ENSDARG00000031307 1228 0.995 - - - 0.995 - - - - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
81. strap ENSDARG00000007405 6426 0.995 - - - 0.995 - - - - - serine/threonine kinase receptor associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1110]
82. PAPD5 2090 0.995 - - - 0.995 - - - - - PAP associated domain containing 5, transcript variant X1
83. sulf2l sulf2l 4980 0.994 - - - 0.994 - - - - -
84. alcamb ENSDARG00000058538 5672 0.994 - - - 0.994 - - - - - activated leukocyte cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030131-1768]
85. slc25a12 ENSDARG00000102362 2773 0.994 - - - 0.994 - - - - - solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
86. SLC7A5 ENSDARG00000099265, ENSDARG00000115845 2319 0.993 - - - 0.993 - - - - - solute carrier family 7 (amino acid transporter light chain, L system), member 5 [Source:ZFIN;Acc:ZDB-GENE-080818-4]
87. PPP4R1L ENSDARG00000099379 2132 0.993 - - - 0.993 - - - - - protein phosphatase 4, regulatory subunit 1-like [Source:ZFIN;Acc:ZDB-GENE-121022-4]
88. krt1-19d ENSDARG00000023082 902 0.993 - - - 0.993 - - - - - keratin, type 1, gene 19d [Source:ZFIN;Acc:ZDB-GENE-060316-1]
89. fzr1 fzr1 2984 0.993 - - - 0.993 - - - - -
90. tjp1a ENSDARG00000077506 2658 0.993 - - - 0.993 - - - - - tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
91. si:ch211-11k18.4 ENSDARG00000087869 3298 0.993 - - - 0.993 - - - - - si:ch211-11k18.4 [Source:ZFIN;Acc:ZDB-GENE-070912-22]
92. rab5c ENSDARG00000026712 4733 0.992 - - - 0.992 - - - - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
93. fgfr2 ENSDARG00000058115 6743 0.992 - - - 0.992 - - - - - fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]
94. trdn ENSDARG00000041779 4283 0.992 - - - 0.992 - - - - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
95. bmpr2a ENSDARG00000011941 2972 0.991 - - - 0.991 - - - - - bone morphogenetic protein receptor, type II a (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-1]
96. mrpl11 ENSDARG00000013075 2927 0.99 - - - 0.990 - - - - - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
97. celf3a ENSDARG00000034668 2432 0.99 - - - 0.990 - - - - - cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
98. nup98 ENSDARG00000074955 3998 0.988 - - - 0.988 - - - - - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
99. brd7 ENSDARG00000008380 3654 0.988 - - - 0.988 - - - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
100. crybb1l1 ENSDARG00000007576 1020 0.988 - - - 0.988 - - - - - crystallin, beta B1, like 1 [Source:ZFIN;Acc:ZDB-GENE-100112-3]

There are 1005 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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