Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tgfb1a

Gene Name Gene ID Reads Annotation
tgfb1a ENSDARG00000041502 972 transforming growth factor, beta 1a [Source:ZFIN;Acc:ZDB-GENE-030618-1]










Genes with expression patterns similar to tgfb1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tgfb1a ENSDARG00000041502 972 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transforming growth factor, beta 1a [Source:ZFIN;Acc:ZDB-GENE-030618-1]
2. PTGFRN_1 ENSDARG00000075505 1447 1.623 0.767 - - - - 0.856 - - - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
3. CAPN1 ENSDARG00000055338 683 1.599 - - - - - 0.842 0.757 - - calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]
4. copa ENSDARG00000004173 3977 1.492 - 0.779 - - - - 0.713 - - coatomer protein complex, subunit alpha [Source:ZFIN;Acc:ZDB-GENE-020905-2]
5. arhgap12a ENSDARG00000008548 757 1.461 - - - - - 0.710 0.751 - - Rho GTPase activating protein 12a [Source:ZFIN;Acc:ZDB-GENE-050809-38]
6. timp2b ENSDARG00000075261 867 1.444 - 0.737 - - - 0.707 - - - TIMP metallopeptidase inhibitor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2655]
7. spty2d1 ENSDARG00000033889, ENSDARG00000115786 1219 1.433 - 0.715 - - - - - 0.718 - SPT2 chromatin protein domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-212]
8. ralgps2 ENSDARG00000026519 1610 1.416 - 0.711 - - - 0.705 - - - Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
9. Sep-10 Sep-10 440 1.408 - 0.706 - - - 0.702 - - -
10. C18H12orf23 C18H12orf23 5362 0.878 - 0.878 - - - - - - -
11. tmem168a ENSDARG00000068705 498 0.87 - - - - - 0.870 - - - transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
12. gng5 ENSDARG00000039830 12102 0.868 - - - - - - 0.868 - - guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
13. hps3 ENSDARG00000015749 481 0.861 - - - - - 0.861 - - - Hermansky-Pudlak syndrome 3 [Source:ZFIN;Acc:ZDB-GENE-061110-115]
14. C2H14orf119 C2H14orf119 716 0.857 - - - - - 0.857 - - -
15. nfe2l1b ENSDARG00000076533, ENSDARG00000114820 1574 0.849 - - - - - - 0.849 - - nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]
16. snx1a ENSDARG00000071031 3975 0.848 - - - - - - 0.848 - - sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
17. map4k5 ENSDARG00000039125 1595 0.846 - - - - - 0.846 - - - mitogen-activated protein kinase kinase kinase kinase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6497]
18. OTTDARG00000032278 OTTDARG00000032278 1016 0.843 - - - - - - 0.843 - -
19. park2 42 0.839 - - - - - 0.839 - - - parkin RBR E3 ubiquitin protein ligase
20. tax1bp3 ENSDARG00000059177 4324 0.838 - - - - - - 0.838 - - Tax1 (human T-cell leukemia virus type I) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2830]
21. ube2c ENSDARG00000101618, ENSDARG00000114670 5271 0.831 - - - - - - 0.831 - - ubiquitin-conjugating enzyme E2C [Source:ZFIN;Acc:ZDB-GENE-051030-48]
22. tsc22d2 ENSDARG00000041839 1109 0.831 - - - - - - 0.831 - - TSC22 domain family 2 [Source:ZFIN;Acc:ZDB-GENE-031001-12]
23. ptbp3 ENSDARG00000043757 6760 0.831 - - - - - - 0.831 - - polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
24. arhgef1b ENSDARG00000055837 2330 0.831 - - - - - - 0.831 - - Rho guanine nucleotide exchange factor (GEF) 1b [Source:ZFIN;Acc:ZDB-GENE-060616-136]
25. tmem141 ENSDARG00000101963 513 0.831 - - - - - 0.831 - - - transmembrane protein 141 [Source:ZFIN;Acc:ZDB-GENE-060929-272]
26. dynlrb1 ENSDARG00000021582, ENSDARG00000104233 6310 0.83 - - - - - - 0.830 - - dynein, light chain, roadblock-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-989]
27. sec23ip ENSDARG00000061413 804 0.824 - - - - - 0.824 - - - SEC23 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5259]
28. lonrf1l ENSDARG00000078567 1049 0.822 - - - - - 0.822 - - - LON peptidase N-terminal domain and ring finger 1, like [Source:ZFIN;Acc:ZDB-GENE-081104-397]
29. arpc5lb ENSDARG00000035433 726 0.821 - - - - - 0.821 - - - actin related protein 2/3 complex, subunit 5-like, b [Source:ZFIN;Acc:ZDB-GENE-060531-161]
30. ccdc12 ENSDARG00000023003, ENSDARG00000113770 1731 0.816 - - - - - - 0.816 - - coiled-coil domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-040801-108]
31. LGR4 ENSDARG00000060542 1222 0.816 - - - - - - 0.816 - - leucine-rich repeat containing G protein-coupled receptor 4 [Source:ZFIN;Acc:ZDB-GENE-111013-1]
32. rchy1 ENSDARG00000016710, ENSDARG00000109668, ENSDARG00000115626 477 0.816 - - - - - 0.816 - - - ring finger and CHY zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-73]
33. ube2g2 ENSDARG00000025404 1774 0.816 - - - - - - 0.816 - - ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-288]
34. mllt3 ENSDARG00000006754 985 0.814 - 0.814 - - - - - - - MLLT3, super elongation complex subunit [Source:ZFIN;Acc:ZDB-GENE-050417-356]
35. copb2 ENSDARG00000038743, ENSDARG00000114286 6404 0.814 - - - - - - 0.814 - - coatomer protein complex, subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-010724-7]
36. MYO1C MYO1C 140 0.813 - - - - - 0.813 - - -
37. zfand6 ENSDARG00000098443 2507 0.813 - - - - - - 0.813 - - zinc finger, AN1-type domain 6 [Source:ZFIN;Acc:ZDB-GENE-030131-8405]
38. gnb4b ENSDARG00000115383 7457 0.81 - - - - - - 0.810 - - guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
39. CABZ01064069.1 CABZ01064069.1 219 0.81 - - - - - 0.810 - - -
40. ITCH ITCH 1226 0.81 - - - - - - 0.810 - -
41. CABZ01075275.1 CABZ01075275.1 124 0.81 - - - - - 0.810 - - -
42. leprel1 leprel1 437 0.808 - - - - - 0.808 - - -
43. chm ENSDARG00000003845 498 0.808 - - - - - - 0.808 - - choroideremia (Rab escort protein 1) [Source:ZFIN;Acc:ZDB-GENE-030318-2]
44. CU862021.1 CU862021.1 5925 0.806 - - - - - - 0.806 - -
45. cnih4 ENSDARG00000087759 3937 0.805 - - - - - 0.805 - - - cornichon family AMPA receptor auxiliary protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-868]
46. CD53 CD53 108 0.805 - - - - - 0.805 - - -
47. zgc:113443 359 0.805 - - - - - 0.805 - - - zgc:113443, transcript variant X3
48. srgap2a srgap2a 7197 0.804 - 0.804 - - - - - - -
49. prdx4 ENSDARG00000069013 1150 0.802 - - - - - - 0.802 - - peroxiredoxin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1096]
50. ivns1abpb ENSDARG00000013946 1972 0.801 0.801 - - - - - - - - influenza virus NS1A binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-6266]
51. emd ENSDARG00000095774, ENSDARG00000114017 1640 0.801 - - - - - 0.801 - - - emerin (Emery-Dreifuss muscular dystrophy) [Source:ZFIN;Acc:ZDB-GENE-070501-2]
52. mospd2 ENSDARG00000026024 854 0.801 - - - - - 0.801 - - - motile sperm domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041114-1]
53. cyt1 ENSDARG00000092947 1717 0.8 - - - - - 0.800 - - - type I cytokeratin, enveloping layer [Source:ZFIN;Acc:ZDB-GENE-991008-6]
54. nrip1b ENSDARG00000068894 2699 0.8 - - - - - - 0.800 - - nuclear receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4173]
55. derl2 ENSDARG00000042401 863 0.8 - - - - - - 0.800 - - derlin 2 [Source:ZFIN;Acc:ZDB-GENE-050522-90]
56. itsn2b ENSDARG00000054973, ENSDARG00000110296 1255 0.8 - - - - - 0.800 - - - intersectin 2b [Source:ZFIN;Acc:ZDB-GENE-050309-102]
57. KIF26A KIF26A 1077 0.799 - 0.799 - - - - - - -
58. trub2 ENSDARG00000028379 783 0.799 - - - - - - 0.799 - - TruB pseudouridine (psi) synthase family member 2 [Source:ZFIN;Acc:ZDB-GENE-040704-41]
59. zgc:91985 zgc:91985 1517 0.797 - - - - - - 0.797 - -
60. twistnb ENSDARG00000024416 1077 0.797 - - - - - 0.797 - - - TWIST neighbor [Source:ZFIN;Acc:ZDB-GENE-041007-3]
61. arhgap5 ENSDARG00000061294 2228 0.796 - - - - - - 0.796 - - Rho GTPase activating protein 5 [Source:ZFIN;Acc:ZDB-GENE-081014-1]
62. SBNO2 SBNO2 773 0.796 - - - - - 0.796 - - -
63. PRSS16 ENSDARG00000076602 963 0.796 - - - - - 0.796 - - - serine protease 16 [Source:ZFIN;Acc:ZDB-GENE-070112-732]
64. gsna ENSDARG00000011459, ENSDARG00000115062, ENSDARG00000116084 1623 0.796 - 0.796 - - - - - - - gelsolin a [Source:ZFIN;Acc:ZDB-GENE-030131-9653]
65. BCL6B ENSDARG00000069335 602 0.796 - - - - - 0.796 - - - B-cell CLL/lymphoma 6, member B [Source:ZFIN;Acc:ZDB-GENE-120907-1]
66. fam20c fam20c 603 0.795 - - - - - 0.795 - - -
67. agpat4 ENSDARG00000069044 4487 0.794 - - - - - - 0.794 - - 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1924]
68. pik3r3a ENSDARG00000103038 1132 0.794 - - - - - 0.794 - - - phosphoinositide-3-kinase, regulatory subunit 3a (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-1978]
69. dda1 ENSDARG00000076074, ENSDARG00000109308 1993 0.793 - - - - - - 0.793 - - DET1 and DDB1 associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2137]
70. sdhaf2 ENSDARG00000062971, ENSDARG00000114840 1320 0.793 - - - - - - 0.793 - - succinate dehydrogenase complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7564]
71. si:dkeyp-55f12.3 ENSDARG00000042345 1812 0.793 - - - - - 0.793 - - - si:dkeyp-55f12.3 [Source:ZFIN;Acc:ZDB-GENE-041001-118]
72. tradd ENSDARG00000036057, ENSDARG00000117083 1583 0.793 - - - - - - 0.793 - - tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
73. U2_6 U2_6 1155 0.792 - - - - - - 0.792 - -
74. KIF26B KIF26B 901 0.791 - - - - - 0.791 - - -
75. sar1b ENSDARG00000103403 1699 0.791 - - - - - - 0.791 - - secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
76. fam46a fam46a 92 0.791 - - - - - 0.791 - - -
77. txlna ENSDARG00000077037 2614 0.791 - - - - - - 0.791 - - taxilin alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2900]
78. selt1a 9746 0.79 - - - - - - 0.790 - - selenoprotein T, 1a
79. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 0.79 - - - - - 0.790 - - - SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
80. hdac6 ENSDARG00000008384 144 0.789 - - - - - 0.789 - - - histone deacetylase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3232]
81. man1a1 ENSDARG00000005652 877 0.787 - - - - - - 0.787 - - mannosidase, alpha, class 1A, member 1 [Source:ZFIN;Acc:ZDB-GENE-041014-321]
82. pus7 ENSDARG00000031774 195 0.787 - - - - - 0.787 - - - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
83. selenbp1 ENSDARG00000024717, ENSDARG00000112316 1407 0.787 - - - - - 0.787 - - - selenium binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1436]
84. hsp90b1 ENSDARG00000003570, ENSDARG00000114206 5097 0.786 - - - - - - 0.786 - - heat shock protein 90, beta (grp94), member 1 [Source:ZFIN;Acc:ZDB-GENE-031002-1]
85. hddc2 ENSDARG00000034957 905 0.785 - - - - - 0.785 - - - HD domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-394]
86. cant1b_1 ENSDARG00000102977 447 0.785 - - - - - 0.785 - - - calcium activated nucleotidase 1b [Source:ZFIN;Acc:ZDB-GENE-040801-114]
87. acap1 ENSDARG00000056346, ENSDARG00000109603 274 0.785 - - - - - - 0.785 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1242]
88. esrp1 ENSDARG00000011245 2097 0.784 - - - - - - 0.784 - - epithelial splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1732]
89. azi2 ENSDARG00000102419 1380 0.783 - - - - - - 0.783 - - 5-azacytidine induced 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2097]
90. sall4 ENSDARG00000044485 1694 0.783 - - - - - - 0.783 - - spalt-like transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-060328-2]
91. fzd7a ENSDARG00000060004, ENSDARG00000115544 4171 0.783 - - - - - - 0.783 - - frizzled class receptor 7a [Source:ZFIN;Acc:ZDB-GENE-990415-223]
92. acsbg1 ENSDARG00000062077 2020 0.783 - - - - - - 0.783 - - acyl-CoA synthetase bubblegum family member 1 [Source:ZFIN;Acc:ZDB-GENE-110914-219]
93. mtrr ENSDARG00000045398 325 0.783 - - - - - 0.783 - - - 5-methyltetrahydrofolate-homocysteine methyltransferase reductase [Source:ZFIN;Acc:ZDB-GENE-101115-3]
94. dennd4c ENSDARG00000102766 897 0.783 - - - - - - 0.783 - - DENN/MADD domain containing 4C [Source:ZFIN;Acc:ZDB-GENE-120727-13]
95. pxn_1 pxn_1 3991 0.782 - - - - - - 0.782 - -
96. lmo7a ENSDARG00000004930 2414 0.782 - 0.782 - - - - - - - LIM domain 7a [Source:ZFIN;Acc:ZDB-GENE-030219-74]
97. prrx1a ENSDARG00000033971 1786 0.782 - - - - - - 0.782 - - paired related homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020905-5]
98. zgc:92313 ENSDARG00000040513 790 0.782 - - - - - - 0.782 - - zgc:92313 [Source:ZFIN;Acc:ZDB-GENE-040718-339]
99. psmd11a ENSDARG00000060150 4529 0.782 - - - - - - 0.782 - - proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
100. vps25 ENSDARG00000059079 3747 0.781 - - - - - - 0.781 - - vacuolar protein sorting 25 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-30]

There are 583 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA