Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tfr1b_1

Gene Name Gene ID Reads Annotation
tfr1b_1 ENSDARG00000077372, ENSDARG00000112880 343 transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]










Genes with expression patterns similar to tfr1b_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tfr1b_1 ENSDARG00000077372, ENSDARG00000112880 343 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
2. si:dkey-167k11.1 si:dkey-167k11.1 14 1.735 - 0.851 - - - - - 0.884 -
3. bik ENSDARG00000045549 18 1.716 - 0.831 - - - - - 0.885 - BCL2 interacting killer [Source:ZFIN;Acc:ZDB-GENE-041210-181]
4. esyt1a ENSDARG00000034714 129 1.711 - 0.832 - - - - - 0.879 - extended synaptotagmin-like protein 1a [Source:ZFIN;Acc:ZDB-GENE-090311-55]
5. CABZ01079241.1 ENSDARG00000098424 88 1.627 - 0.828 - - - - - 0.799 - zinc finger Y-chromosomal protein 1-like [Source:NCBI gene;Acc:563292]
6. ITGB1BP2 ENSDARG00000030176 2472 1.602 - - - - - 0.810 0.792 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
7. efhc1 ENSDARG00000009743 113 1.599 - 0.709 - - - - - 0.890 - EF-hand domain (C-terminal) containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1300]
8. FBXO40 FBXO40 194 1.597 - - - - - 0.849 0.748 - -
9. sspn ENSDARG00000041747, ENSDARG00000114109, ENSDARG00000114643 1228 1.589 - 0.801 - - - - 0.788 - - sarcospan (Kras oncogene-associated gene) [Source:ZFIN;Acc:ZDB-GENE-051127-43]
10. grsf1 ENSDARG00000053021 2752 1.577 - - - - - 0.811 0.766 - - G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196]
11. zgc:92113 1738 1.572 - 0.825 - - - - 0.747 - - zgc:92113
12. OCEL1 OCEL1 27 1.568 - 0.854 - - - - - 0.714 -
13. ccdc80 ENSDARG00000000002 1284 1.551 - - - - - 0.705 0.846 - - coiled-coil domain containing 80 [Source:ZFIN;Acc:ZDB-GENE-030616-56]
14. col4a1 ENSDARG00000055009 3083 1.541 - - - - - 0.765 0.776 - - collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
15. ptprk ENSDARG00000063416 742 1.538 0.720 - - - - - - 0.818 - protein tyrosine phosphatase, receptor type, K [Source:ZFIN;Acc:ZDB-GENE-030131-9834]
16. myh7bb ENSDARG00000035322 287 1.52 - - - - - - 0.705 0.815 - myosin, heavy chain 7B, cardiac muscle, beta b [Source:ZFIN;Acc:ZDB-GENE-090311-5]
17. lin7a ENSDARG00000013414 1589 1.514 - - - - - 0.793 0.721 - - lin-7 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-1665]
18. las1l ENSDARG00000062457, ENSDARG00000114475 3987 1.506 0.720 0.786 - - - - - - - LAS1-like, ribosome biogenesis factor [Source:ZFIN;Acc:ZDB-GENE-030131-3625]
19. DUSP26 ENSDARG00000103752 404 1.494 - - - - - 0.732 0.762 - - dual specificity phosphatase 26 [Source:HGNC Symbol;Acc:HGNC:28161]
20. mrps9 ENSDARG00000061505 1636 1.493 - - - - - 0.737 0.756 - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
21. asb4 ENSDARG00000034988 1115 1.49 - - - - - - 0.732 0.758 - ankyrin repeat and SOCS box containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-100]
22. bcl2l13 ENSDARG00000062370, ENSDARG00000111116 3206 1.488 - - - - - 0.710 0.778 - - BCL2 like 13 [Source:ZFIN;Acc:ZDB-GENE-050419-215]
23. cmya5 ENSDARG00000061379 1423 1.483 - - - - - 0.724 0.759 - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
24. kbtbd12 ENSDARG00000001882 1196 1.48 - - - - - 0.721 0.759 - - kelch repeat and BTB (POZ) domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-050904-1]
25. PRKDC ENSDARG00000075083 693 1.458 - 0.719 - - - 0.739 - - - protein kinase, DNA-activated, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-9008]
26. myod1 ENSDARG00000030110 6019 1.453 - - - - - 0.715 0.738 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
27. FARS2 ENSDARG00000091247 202 1.45 - 0.718 - - - - - 0.732 - phenylalanyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-38]
28. atxn1b ENSDARG00000060862 345 1.44 - - - - - 0.705 0.735 - - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
29. PTGER3 ENSDARG00000055781 187 1.438 - 0.732 - - - - 0.706 - - prostaglandin E receptor 3 (subtype EP3) [Source:ZFIN;Acc:ZDB-GENE-120508-5]
30. ppp6r2b ENSDARG00000069654 323 0.907 - - - - - - - 0.907 - protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
31. prkcbb ENSDARG00000022254 319 0.906 - 0.906 - - - - - - - protein kinase C, beta b [Source:ZFIN;Acc:ZDB-GENE-040426-1178]
32. pan3 ENSDARG00000031637, ENSDARG00000111004 613 0.905 - 0.905 - - - - - - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
33. hhipl1 ENSDARG00000062501 210 0.904 - 0.904 - - - - - - - HHIP-like 1 [Source:ZFIN;Acc:ZDB-GENE-090306-3]
34. josd2 ENSDARG00000057626, ENSDARG00000111978 273 0.899 - 0.899 - - - - - - - Josephin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-850]
35. mapk7 ENSDARG00000023110 455 0.899 - 0.899 - - - - - - - mitogen-activated protein kinase 7 [Source:ZFIN;Acc:ZDB-GENE-050320-10]
36. si:ch211-101n13.1 si:ch211-101n13.1 68 0.898 - - - - - - - 0.898 -
37. pms2 ENSDARG00000075672, ENSDARG00000115929 248 0.895 - - - - - - - 0.895 - PMS1 homolog 2, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030131-686]
38. slc2a6 ENSDARG00000058731 103 0.894 - - - - - - - 0.894 - solute carrier family 2 (facilitated glucose transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-081104-301]
39. CR339041.2 ENSDARG00000051711 18 0.893 - - - - - - - 0.893 -
40. rtkn2 rtkn2 1092 0.892 - 0.892 - - - - - - -
41. stk36 ENSDARG00000061095 113 0.892 - - - - - - - 0.892 - serine/threonine kinase 36 (fused homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030912-6]
42. pphln1 ENSDARG00000045692 1023 0.892 - - - - - - - 0.892 - periphilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1873]
43. acap1 ENSDARG00000056346, ENSDARG00000109603 274 0.892 - 0.892 - - - - - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1242]
44. hsdl1 ENSDARG00000041736 171 0.891 - 0.891 - - - - - - - hydroxysteroid dehydrogenase like 1 [Source:ZFIN;Acc:ZDB-GENE-041212-31]
45. BX547934.1 ENSDARG00000097061 35 0.89 - - - - - - - 0.890 -
46. SLC35A3_1 SLC35A3_1 35 0.886 - - - - - - - 0.886 -
47. FAM124B ENSDARG00000087489 16 0.885 - - - - - - - 0.885 - family with sequence similarity 124B [Source:ZFIN;Acc:ZDB-GENE-130327-1]
48. si:dkey-152b24.7 ENSDARG00000099715 26 0.884 - - - - - - - 0.884 - si:dkey-152b24.7 [Source:ZFIN;Acc:ZDB-GENE-100921-77]
49. CABZ01078944.1 CABZ01078944.1 9 0.884 - - - - - - - 0.884 -
50. pde10a ENSDARG00000003449 60 0.884 - - - - - - - 0.884 - phosphodiesterase 10A [Source:ZFIN;Acc:ZDB-GENE-040426-1115]
51. LRRC45 ENSDARG00000014005 140 0.884 - - - - - - - 0.884 - leucine rich repeat containing 45 [Source:ZFIN;Acc:ZDB-GENE-121214-317]
52. CABZ01076234.1 CABZ01076234.1 49 0.884 - - - - - - - 0.884 -
53. CU855931.2 CU855931.2 13 0.884 - - - - - - - 0.884 -
54. si:dkey-148f24.5 si:dkey-148f24.5 7 0.884 - - - - - - - 0.884 -
55. zgc:113162 ENSDARG00000052923 62 0.883 - - - - - - - 0.883 - zgc:113162 [Source:ZFIN;Acc:ZDB-GENE-050522-530]
56. pvrl4 155 0.883 - - - - - - - 0.883 - poliovirus receptor-related 4
57. bon bon 20 0.883 - - - - - - - 0.883 -
58. setd6 ENSDARG00000043986, ENSDARG00000113991 194 0.883 - - - - - - - 0.883 - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
59. si:ch73-222h13.1 ENSDARG00000087107 16 0.883 - - - - - - - 0.883 - si:ch73-222h13.1 [Source:ZFIN;Acc:ZDB-GENE-090313-144]
60. FP236168.1 FP236168.1 150 0.882 - - - - - - - 0.882 -
61. CR352225.2 CR352225.2 1138 0.882 - 0.882 - - - - - - -
62. dync2li1 ENSDARG00000039770, ENSDARG00000111924 133 0.882 - 0.882 - - - - - - - dynein, cytoplasmic 2, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1230]
63. HYAL2_1 HYAL2_1 266 0.881 - 0.881 - - - - - - -
64. si:ch211-236p5.3 ENSDARG00000086418 138 0.881 - - - - - - - 0.881 - si:ch211-236p5.3 [Source:ZFIN;Acc:ZDB-GENE-081028-31]
65. si:dkey-4j21.1 17 0.881 - - - - - - - 0.881 - si:dkey-4j21.1, transcript variant X2
66. cdc40 ENSDARG00000041226 514 0.881 - 0.881 - - - - - - - cell division cycle 40 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050116-3]
67. man2a1 ENSDARG00000102200 12 0.881 - - - - - - - 0.881 - mannosidase, alpha, class 2A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060526-31]
68. zgc:113411 ENSDARG00000038133, ENSDARG00000112781 68 0.881 - - - - - - - 0.881 - zgc:113411 [Source:ZFIN;Acc:ZDB-GENE-050417-474]
69. CABZ01006254.1 CABZ01006254.1 95 0.881 - - - - - - - 0.881 -
70. si:ch73-256j6.5 ENSDARG00000092732 65 0.88 - - - - - - - 0.880 - si:ch73-256j6.5 [Source:ZFIN;Acc:ZDB-GENE-070705-225]
71. spata5l1 ENSDARG00000061763 127 0.88 - 0.880 - - - - - - - spermatogenesis associated 5-like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-204]
72. pdss1 ENSDARG00000017910 1290 0.88 - - - - - - 0.880 - - prenyl (decaprenyl) diphosphate synthase, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4430]
73. chst3a ENSDARG00000061070 127 0.88 - - - - - - - 0.880 - carbohydrate (chondroitin 6) sulfotransferase 3a [Source:ZFIN;Acc:ZDB-GENE-090312-180]
74. CU633477.1 CU633477.1 19 0.879 - - - - - - - 0.879 -
75. emc4 ENSDARG00000039268 553 0.879 - - - - - - - 0.879 - ER membrane protein complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1891]
76. RBM20 74 0.878 - - - - - - - 0.878 - RNA binding motif protein 20, transcript variant X1
77. csdc2b 82 0.877 - 0.877 - - - - - - - cold shock domain containing C2, RNA binding b
78. dhrs11b ENSDARG00000031299 409 0.877 - - - - - - - 0.877 - dehydrogenase/reductase (SDR family) member 11b [Source:ZFIN;Acc:ZDB-GENE-040625-155]
79. chmp6b ENSDARG00000102024 37 0.877 - - - - - - - 0.877 - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
80. GLDC ENSDARG00000035120 112 0.877 - 0.877 - - - - - - - glycine dehydrogenase (decarboxylating) [Source:ZFIN;Acc:ZDB-GENE-030131-340]
81. odf3l2 36 0.877 - - - - - - - 0.877 - outer dense fiber of sperm tails 3-like 2
82. atp8a1 ENSDARG00000063001 146 0.877 - - - - - - - 0.877 - ATPase phospholipid transporting 8A1 [Source:ZFIN;Acc:ZDB-GENE-060929-36]
83. tmem175 ENSDARG00000076376, ENSDARG00000111449 136 0.877 - - - - - - - 0.877 - transmembrane protein 175 [Source:ZFIN;Acc:ZDB-GENE-070705-79]
84. cbln4 ENSDARG00000061240 67 0.876 - - - - - - - 0.876 - cerebellin 4 precursor [Source:ZFIN;Acc:ZDB-GENE-080204-58]
85. apnl ENSDARG00000090900 21 0.876 - - - - - - - 0.876 - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
86. efcab7 ENSDARG00000020279 1030 0.876 - - - - - - - 0.876 - EF-hand calcium binding domain 7 [Source:ZFIN;Acc:ZDB-GENE-040625-115]
87. RPS11 ENSDARG00000053058 32 0.875 - - - - - - - 0.875 - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
88. C14H5orf45 C14H5orf45 83 0.875 - - - - - - - 0.875 -
89. zgc:92218 zgc:92218 64 0.875 - 0.875 - - - - - - -
90. SUOX ENSDARG00000091574 122 0.875 - - - - - - - 0.875 - sulfite oxidase [Source:ZFIN;Acc:ZDB-GENE-070718-3]
91. CR385054.1_1 ENSDARG00000100106 43 0.874 - - - - - - - 0.874 -
92. cttnbp2nl cttnbp2nl 166 0.874 - - - - - - - 0.874 -
93. SERP1 ENSDARG00000076223 2528 0.874 - - - - - - - 0.874 - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
94. MYH9 MYH9 158 0.873 - - - - - - - 0.873 -
95. mau2 ENSDARG00000042056 2378 0.873 - 0.873 - - - - - - - MAU2 sister chromatid cohesion factor [Source:ZFIN;Acc:ZDB-GENE-050522-383]
96. CU633857.1 ENSDARG00000115315 21 0.872 - - - - - - - 0.872 - multiciliate differentiation and DNA synthesis associated cell cycle protein [Source:NCBI gene;Acc:100537904]
97. wisp1b ENSDARG00000076685 38 0.871 - 0.871 - - - - - - - WNT1 inducible signaling pathway protein 1b [Source:ZFIN;Acc:ZDB-GENE-080220-16]
98. si:dkey-183n20.2 si:dkey-183n20.2 210 0.871 - - - - - - - 0.871 -
99. C5H9orf117 C5H9orf117 88 0.871 - 0.871 - - - - - - -
100. sema6d ENSDARG00000002748 133 0.87 - 0.870 - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]

There are 1143 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA