Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tfeb

Gene Name Gene ID Reads Annotation
tfeb ENSDARG00000010794 473 transcription factor EB [Source:ZFIN;Acc:ZDB-GENE-090807-3]










Genes with expression patterns similar to tfeb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tfeb ENSDARG00000010794 473 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transcription factor EB [Source:ZFIN;Acc:ZDB-GENE-090807-3]
2. cmtm4 ENSDARG00000052020, ENSDARG00000115570 1033 1.657 - 0.826 - - - - 0.831 - - CKLF-like MARVEL transmembrane domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-195]
3. mtx2 ENSDARG00000029415 2205 1.632 - 0.900 - - - - 0.732 - - metaxin 2 [Source:ZFIN;Acc:ZDB-GENE-021210-2]
4. RSPH1 289 1.569 - 0.824 - - - - 0.745 - - radial spoke head 1 homolog (Chlamydomonas), transcript variant X2
5. PXMP4 ENSDARG00000114885 212 1.553 - 0.762 - - - - 0.791 - - peroxisomal membrane protein 4 [Source:HGNC Symbol;Acc:HGNC:15920]
6. cish ENSDARG00000060316 329 1.55 - 0.818 - - - - 0.732 - - cytokine inducible SH2-containing protein [Source:ZFIN;Acc:ZDB-GENE-050907-1]
7. AL928724.1 ENSDARG00000097525 421 1.547 - 0.771 - 0.776 - - - - -
8. vps8 ENSDARG00000060477, ENSDARG00000113757 271 1.545 - 0.844 - 0.701 - - - - - vacuolar protein sorting 8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-348]
9. mon1a ENSDARG00000078585 554 1.544 - 0.804 - 0.740 - - - - - MON1 secretory trafficking family member A [Source:ZFIN;Acc:ZDB-GENE-070615-6]
10. ponzr1 ENSDARG00000090444 540 1.538 - 0.752 - - - - 0.786 - - plac8 onzin related protein 1 [Source:ZFIN;Acc:ZDB-GENE-070727-1]
11. ednraa ENSDARG00000011876, ENSDARG00000114764 1573 1.538 - 0.748 - - - - 0.790 - - endothelin receptor type Aa [Source:ZFIN;Acc:ZDB-GENE-010906-2]
12. pccb ENSDARG00000038910 1017 1.534 - - - - - 0.832 0.702 - - propionyl-CoA carboxylase subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-2467]
13. kcnj13 ENSDARG00000043443 700 1.527 - - - 0.758 - - 0.769 - - potassium inwardly-rectifying channel, subfamily J, member 13 [Source:ZFIN;Acc:ZDB-GENE-070129-1]
14. ppp1r13bb ENSDARG00000009142 1175 1.525 - 0.760 - - - - - - 0.765 protein phosphatase 1, regulatory subunit 13Bb [Source:ZFIN;Acc:ZDB-GENE-030131-4327]
15. tecra ENSDARG00000101585 609 1.514 - 0.741 - 0.773 - - - - - trans-2,3-enoyl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-090930-1]
16. extl2 ENSDARG00000063191 118 1.512 - - 0.773 0.739 - - - - - exostosin-like glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1122]
17. GPR116_2 GPR116_2 380 1.507 - 0.779 0.728 - - - - - -
18. hsd17b12a ENSDARG00000015709 2499 1.501 - - 0.751 - - - - - 0.750 hydroxysteroid (17-beta) dehydrogenase 12a [Source:ZFIN;Acc:ZDB-GENE-030131-5628]
19. CR385054.1_1 ENSDARG00000100106 43 1.496 - - 0.737 - - - 0.759 - -
20. pros1 ENSDARG00000068261 276 1.495 - 0.784 - 0.711 - - - - - protein S [Source:ZFIN;Acc:ZDB-GENE-061013-657]
21. dlec1 ENSDARG00000075825 60 1.491 - 0.751 - 0.740 - - - - - DLEC1, cilia and flagella associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-65]
22. cpb2 ENSDARG00000037144, ENSDARG00000113001 158 1.487 - 0.709 - - - 0.778 - - - carboxypeptidase B2 (plasma) [Source:ZFIN;Acc:ZDB-GENE-050522-259]
23. zgc:162396 ENSDARG00000069549, ENSDARG00000114129 377 1.486 - 0.785 - - - - 0.701 - - zgc:162396 [Source:ZFIN;Acc:ZDB-GENE-030131-1190]
24. MYO1C MYO1C 140 1.479 - - - 0.721 - - 0.758 - -
25. dynlt1 ENSDARG00000045909 2451 1.477 - 0.738 - - - - 0.739 - - dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc:ZDB-GENE-041210-9]
26. wdr19 ENSDARG00000037406 98 1.464 0.754 - - - - - 0.710 - - WD repeat domain 19 [Source:ZFIN;Acc:ZDB-GENE-090313-277]
27. med13a ENSDARG00000053884, ENSDARG00000112778 931 1.456 - - 0.748 - - - 0.708 - - mediator complex subunit 13a [Source:ZFIN;Acc:ZDB-GENE-070627-13]
28. si:dkey-163m14.2 274 1.455 0.744 0.711 - - - - - - - si:dkey-163m14.2
29. fam135a ENSDARG00000059843 2352 1.448 0.736 - - - - - 0.712 - - family with sequence similarity 135, member A [Source:ZFIN;Acc:ZDB-GENE-080130-1]
30. cgnl1 ENSDARG00000015805 856 1.439 - - - - - 0.732 0.707 - - cingulin-like 1 [Source:ZFIN;Acc:ZDB-GENE-071009-2]
31. eif4a2 ENSDARG00000016477 665 1.437 - 0.709 - - - - 0.728 - - eukaryotic translation initiation factor 4A, isoform 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2802]
32. sgk1 ENSDARG00000025522, ENSDARG00000115600 1650 1.432 - 0.712 - - - - 0.720 - - serum/glucocorticoid regulated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2860]
33. C8H9orf116 C8H9orf116 379 1.429 - 0.710 - - - - 0.719 - -
34. cxxc1l cxxc1l 1035 1.419 - 0.700 - - - - 0.719 - -
35. rbpms2a ENSDARG00000045930 234 0.93 - 0.930 - - - - - - - RNA binding protein, mRNA processing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040718-106]
36. CT955984.1 ENSDARG00000113577 1482 0.882 - - - - - - 0.882 - -
37. NDNF ENSDARG00000062936 7287 0.869 - - - - - - 0.869 - - neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
38. mtmr9 ENSDARG00000015860 1339 0.861 - 0.861 - - - - - - - myotubularin related protein 9 [Source:ZFIN;Acc:ZDB-GENE-040724-223]
39. dvl1b ENSDARG00000055552 146 0.859 0.859 - - - - - - - - dishevelled segment polarity protein 1b [Source:ZFIN;Acc:ZDB-GENE-071004-1]
40. pacsin1b ENSDARG00000042128 1051 0.857 - 0.857 - - - - - - - protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
41. gsto2 ENSDARG00000033285 583 0.857 0.857 - - - - - - - - glutathione S-transferase omega 2 [Source:ZFIN;Acc:ZDB-GENE-041114-67]
42. si:dkey-261h17.1 ENSDARG00000095268 11403 0.854 - - - - - - 0.854 - - si:dkey-261h17.1 [Source:ZFIN;Acc:ZDB-GENE-030829-14]
43. CRTC2 ENSDARG00000074910 297 0.854 - 0.854 - - - - - - - CREB regulated transcription coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2214]
44. mut ENSDARG00000060554 420 0.852 - - - - - - 0.852 - - methylmalonyl CoA mutase [Source:ZFIN;Acc:ZDB-GENE-010430-3]
45. CR376783.1 ENSDARG00000074235 259 0.849 - - - - - - 0.849 - - V-set domain-containing T-cell activation inhibitor 1-like [Source:NCBI gene;Acc:797620]
46. cramp1l cramp1l 700 0.849 - 0.849 - - - - - - -
47. ppifa ENSDARG00000007409 185 0.847 - 0.847 - - - - - - - peptidylprolyl isomerase Fa [Source:ZFIN;Acc:ZDB-GENE-040912-52]
48. CCDC108 CCDC108 74 0.845 - 0.845 - - - - - - -
49. fam13a ENSDARG00000075564 1905 0.845 - - - - - - 0.845 - - family with sequence similarity 13, member A [Source:ZFIN;Acc:ZDB-GENE-050208-102]
50. WDR81 ENSDARG00000079702 822 0.842 - - - - - - 0.842 - - WD repeat domain 81 [Source:ZFIN;Acc:ZDB-GENE-030131-3389]
51. npm1a ENSDARG00000014329, ENSDARG00000113199 31910 0.84 - - - - - - 0.840 - - nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
52. zhx2 zhx2 365 0.84 - - 0.840 - - - - - -
53. fgf24 ENSDARG00000037677 242 0.836 - 0.836 - - - - - - - fibroblast growth factor 24 [Source:ZFIN;Acc:ZDB-GENE-030708-1]
54. ndfip1l ENSDARG00000102367 292 0.835 - 0.835 - - - - - - - Nedd4 family interacting protein 1, like [Source:ZFIN;Acc:ZDB-GENE-040718-207]
55. TNS3 TNS3 1286 0.834 - - - - - - 0.834 - -
56. mrpl20 ENSDARG00000090462 791 0.833 - - - - - - 0.833 - - mitochondrial ribosomal protein L20 [Source:ZFIN;Acc:ZDB-GENE-030131-5299]
57. crip1 ENSDARG00000053858 768 0.833 - 0.833 - - - - - - - cysteine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-1]
58. mrps18a ENSDARG00000024465 5187 0.832 - - - - - - 0.832 - - mitochondrial ribosomal protein S18A [Source:ZFIN;Acc:ZDB-GENE-041210-109]
59. fam126a ENSDARG00000026762 1120 0.831 - 0.831 - - - - - - - family with sequence similarity 126, member A [Source:ZFIN;Acc:ZDB-GENE-040426-1806]
60. METRNL 166 0.829 - - - - - - 0.829 - - meteorin, glial cell differentiation regulator-like
61. usp19 ENSDARG00000004132 811 0.828 - - - - - - 0.828 - - ubiquitin specific peptidase 19 [Source:ZFIN;Acc:ZDB-GENE-030131-3055]
62. hif1an ENSDARG00000031915 2098 0.828 - 0.828 - - - - - - - hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
63. tfap2b ENSDARG00000012667 746 0.826 - 0.826 - - - - - - - transcription factor AP-2 beta [Source:ZFIN;Acc:ZDB-GENE-050417-394]
64. nudc ENSDARG00000104837 1798 0.825 - - - - - - 0.825 - - nudC nuclear distribution protein [Source:ZFIN;Acc:ZDB-GENE-040426-899]
65. dcps ENSDARG00000009862 571 0.825 - - - - - - 0.825 - - decapping enzyme, scavenger [Source:ZFIN;Acc:ZDB-GENE-040311-1]
66. clcnk ENSDARG00000022560 355 0.823 - 0.823 - - - - - - - chloride channel K [Source:ZFIN;Acc:ZDB-GENE-040426-1379]
67. lnx2b ENSDARG00000071478 654 0.822 - 0.822 - - - - - - - ligand of numb-protein X 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2500]
68. gfra1b ENSDARG00000102564 821 0.821 - 0.821 - - - - - - - gdnf family receptor alpha 1b [Source:ZFIN;Acc:ZDB-GENE-010226-3]
69. SNAP23 SNAP23 270 0.82 - 0.820 - - - - - - -
70. ABCC10 ENSDARG00000077988, ENSDARG00000111885, ENSDARG00000113210 81 0.819 0.819 - - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 10 [Source:ZFIN;Acc:ZDB-GENE-050517-24]
71. arl2bp ENSDARG00000025383, ENSDARG00000114401 576 0.818 - 0.818 - - - - - - - ADP-ribosylation factor-like 2 binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1604]
72. pabpn1 ENSDARG00000045373 4876 0.818 - - - - - - 0.818 - - poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
73. per2 ENSDARG00000034503 264 0.818 - 0.818 - - - - - - - period circadian clock 2 [Source:ZFIN;Acc:ZDB-GENE-011220-2]
74. zfp36l1b ENSDARG00000021443 2974 0.817 - - - - - - 0.817 - - zinc finger protein 36, C3H type-like 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2391]
75. fam171a1 ENSDARG00000079788 1445 0.817 - - - - - - 0.817 - - family with sequence similarity 171, member A1 [Source:ZFIN;Acc:ZDB-GENE-061208-1]
76. wbp1la ENSDARG00000013245 143 0.816 - 0.816 - - - - - - - WW domain binding protein 1-like a [Source:ZFIN;Acc:ZDB-GENE-030131-1961]
77. nkiras1 ENSDARG00000099527 277 0.816 - - - - - 0.816 - - - NFKB inhibitor interacting Ras-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-215]
78. CLINT1 CLINT1 558 0.815 - 0.815 - - - - - - -
79. sod2 ENSDARG00000042644 1382 0.813 - 0.813 - - - - - - - superoxide dismutase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7742]
80. C25H12orf29 C25H12orf29 31 0.813 0.813 - - - - - - - -
81. zc3h7a ENSDARG00000102195 564 0.812 - - - - - - 0.812 - - zinc finger CCCH-type containing 7A [Source:ZFIN;Acc:ZDB-GENE-040426-2776]
82. tmem248 ENSDARG00000018825 1560 0.812 - - - - - - 0.812 - - transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
83. ssna1 ENSDARG00000101300 403 0.811 0.811 - - - - - - - - Sjogren syndrome nuclear autoantigen 1 [Source:ZFIN;Acc:ZDB-GENE-081104-255]
84. si:ch211-86h15.1 ENSDARG00000074098 354 0.81 0.810 - - - - - - - - si:ch211-86h15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-38]
85. Mar-02 Mar-02 1812 0.81 - 0.810 - - - - - - -
86. CABZ01076275.1 ENSDARG00000100753 5137 0.81 - - - - - - 0.810 - - scavenger receptor class B, member 2b [Source:NCBI gene;Acc:564077]
87. TYRP1 TYRP1 1450 0.809 - - - - - - 0.809 - -
88. hmga2 ENSDARG00000069912 20402 0.809 - - - - - - 0.809 - - high mobility group AT-hook 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3148]
89. acbd5a ENSDARG00000034883 300 0.808 - 0.808 - - - - - - - acyl-CoA binding domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-050522-268]
90. CABZ01059627.1 ENSDARG00000078394 101 0.808 0.808 - - - - - - - -
91. zgc:165539 ENSDARG00000027639 20 0.807 - - 0.807 - - - - - - zgc:165539 [Source:ZFIN;Acc:ZDB-GENE-030131-5478]
92. igf2bp2b ENSDARG00000099758, ENSDARG00000111268, ENSDARG00000116761 588 0.806 - 0.806 - - - - - - - insulin-like growth factor 2 mRNA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060503-536]
93. plod3_1 ENSDARG00000076317 80 0.806 0.806 - - - - - - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-021031-4]
94. fam193a ENSDARG00000102787 617 0.806 - - - - - - 0.806 - - family with sequence similarity 193, member A [Source:ZFIN;Acc:ZDB-GENE-080917-25]
95. KANSL1 KANSL1 512 0.805 - 0.805 - - - - - - -
96. klhl22 ENSDARG00000088807 324 0.805 - 0.805 - - - - - - - kelch-like family member 22 [Source:ZFIN;Acc:ZDB-GENE-081104-154]
97. cicb ENSDARG00000055502 1356 0.804 - - - - - - 0.804 - - capicua transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-030131-1966]
98. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 0.804 - - - - - - 0.804 - - heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
99. si:ch1073-291c23.2 ENSDARG00000074869 585 0.804 - - - - - - 0.804 - - si:ch1073-291c23.2 [Source:ZFIN;Acc:ZDB-GENE-081107-2]
100. ift27 ENSDARG00000099279 393 0.803 - - - - - - 0.803 - - intraflagellar transport 27 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041212-9]

There are 883 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA