Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tfe3a

Gene Name Gene ID Reads Annotation
tfe3a ENSDARG00000098903 1530 transcription factor binding to IGHM enhancer 3a [Source:ZFIN;Acc:ZDB-GENE-010919-2]










Genes with expression patterns similar to tfe3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tfe3a ENSDARG00000098903 1530 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transcription factor binding to IGHM enhancer 3a [Source:ZFIN;Acc:ZDB-GENE-010919-2]
2. ubxn6 ENSDARG00000003087, ENSDARG00000113404 431 1.902 - - - - - 0.916 - 0.986 - UBX domain protein 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5680]
3. MRPS36 ENSDARG00000079823, ENSDARG00000113427 3694 1.895 - 0.984 - - - - - 0.911 - mitochondrial ribosomal protein S36 [Source:ZFIN;Acc:ZDB-GENE-081104-343]
4. uros ENSDARG00000027491 1147 1.783 - - - - - 0.839 - 0.944 - uroporphyrinogen III synthase [Source:ZFIN;Acc:ZDB-GENE-040323-2]
5. zgc:171566 ENSDARG00000105118 340 1.77 - - - - - 0.785 - 0.985 - zgc:171566 [Source:ZFIN;Acc:ZDB-GENE-050309-193]
6. slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 1.768 0.804 - - - - - - 0.964 - slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]
7. glo1 ENSDARG00000068978 1384 1.755 - 0.994 - - - - - 0.761 - glyoxalase 1 [Source:ZFIN;Acc:ZDB-GENE-030722-9]
8. wdfy4 ENSDARG00000077009 802 1.752 - - - - - - 0.769 0.983 - WDFY family member 4 [Source:ZFIN;Acc:ZDB-GENE-090313-322]
9. hoxc13b ENSDARG00000113877 549 1.741 - - - 0.808 - - - 0.933 - homeobox C13b [Source:ZFIN;Acc:ZDB-GENE-000822-5]
10. eif4g2a ENSDARG00000020377, ENSDARG00000112658 6895 1.714 - 0.990 - - - 0.724 - - - eukaryotic translation initiation factor 4, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-2173]
11. wnt2 ENSDARG00000041117, ENSDARG00000115436 242 1.711 - - - - - 0.728 - 0.983 - wingless-type MMTV integration site family member 2 [Source:ZFIN;Acc:ZDB-GENE-980526-416]
12. ap2b1 ENSDARG00000035152 2912 1.711 - 0.995 - - - 0.716 - - - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
13. phf3 ENSDARG00000034768 1372 1.709 - - - - - 0.734 - 0.975 - PHD finger protein 3 [Source:ZFIN;Acc:ZDB-GENE-090313-207]
14. abcb7 ENSDARG00000062795 1404 1.707 - 0.988 - - - 0.719 - - - ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:ZFIN;Acc:ZDB-GENE-050517-10]
15. ceacam1 ENSDARG00000041119, ENSDARG00000111374 1763 1.705 - 0.995 - - - - 0.710 - - carcinoembryonic antigen-related cell adhesion molecule 1 [Source:ZFIN;Acc:ZDB-GENE-010724-14]
16. tmem45b ENSDARG00000056239 2395 1.7 - 0.915 - - - - 0.785 - - transmembrane protein 45B [Source:ZFIN;Acc:ZDB-GENE-040426-1904]
17. ca6 ENSDARG00000056499, ENSDARG00000110050 3236 1.7 - 0.983 - - - - 0.717 - - carbonic anhydrase VI [Source:ZFIN;Acc:ZDB-GENE-030131-7091]
18. GID4 ENSDARG00000079482 1375 1.696 - - - - - 0.759 - 0.937 - GID complex subunit 4 homolog [Source:HGNC Symbol;Acc:HGNC:28453]
19. PRKAG2 PRKAG2 688 1.693 - 0.992 - - - 0.701 - - -
20. npm1b ENSDARG00000037675 5448 1.686 - 0.980 - - - 0.706 - - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
21. GNAL ENSDARG00000045415 568 1.685 - - - - - - 0.702 0.983 - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type [Source:ZFIN;Acc:ZDB-GENE-041114-26]
22. TMEM150A_2 TMEM150A_2 739 1.675 - - - - - - 0.718 0.957 -
23. CABZ01012857.1 CABZ01012857.1 78 1.667 - - - 0.813 - 0.854 - - -
24. golgb1 ENSDARG00000061951 2023 1.641 - - - - - - 0.762 0.879 - golgin B1 [Source:ZFIN;Acc:ZDB-GENE-030429-9]
25. cnn3a ENSDARG00000099510 6063 1.635 - - - - - - 0.763 0.872 - calponin 3, acidic a [Source:ZFIN;Acc:ZDB-GENE-030131-5130]
26. cdc42l ENSDARG00000040158, ENSDARG00000116748 11671 1.63 - 0.897 - - - - 0.733 - - cell division cycle 42, like [Source:ZFIN;Acc:ZDB-GENE-030131-6069]
27. RNF5 ENSDARG00000075606 1730 1.625 - - - - - 0.873 0.752 - - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
28. slc38a5a ENSDARG00000009901 2527 1.608 - - - - - 0.841 0.767 - - solute carrier family 38, member 5a [Source:ZFIN;Acc:ZDB-GENE-081105-92]
29. il13ra1 ENSDARG00000080020 443 1.58 - - - - - 0.852 0.728 - - interleukin 13 receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-103]
30. SLC25A24 ENSDARG00000008568 2005 1.575 - - - - - 0.713 0.862 - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24 [Source:ZFIN;Acc:ZDB-GENE-040912-183]
31. ptges ENSDARG00000020136, ENSDARG00000115727 747 1.571 0.767 - - - - 0.804 - - - prostaglandin E synthase [Source:ZFIN;Acc:ZDB-GENE-050407-2]
32. CABZ01038494.1 ENSDARG00000088258 908 1.561 - - - - - 0.732 0.829 - - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
33. zgc:193711 ENSDARG00000101901 503 1.546 - - - 0.793 - - 0.753 - - zgc:193711 [Source:ZFIN;Acc:ZDB-GENE-081022-34]
34. trhr2 ENSDARG00000093901, ENSDARG00000114177 67 1.544 - - - 0.786 - 0.758 - - - thyrotropin releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050419-193]
35. stk11ip ENSDARG00000070122, ENSDARG00000111986 199 1.533 - - - 0.702 - 0.831 - - - serine/threonine kinase 11 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-1022]
36. PKN1 PKN1 42 1.532 0.711 - - - - 0.821 - - -
37. pknox2 ENSDARG00000055349 784 1.528 - - - - - 0.783 - 0.745 - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
38. galnt2 ENSDARG00000003829 891 1.513 - - - - - 0.743 0.770 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-041111-110]
39. wars2 ENSDARG00000011801 134 1.508 - - - 0.708 - 0.800 - - - tryptophanyl tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050306-26]
40. msxc msxc 3142 1.499 - - - - - 0.765 0.734 - -
41. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.495 - - - - - 0.784 - 0.711 - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
42. mgat1a ENSDARG00000012407 605 1.494 - - - - - 0.732 0.762 - - mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase a [Source:ZFIN;Acc:ZDB-GENE-040426-1515]
43. TMEM179 ENSDARG00000013292 3452 1.489 - 0.789 - - - - 0.700 - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
44. phgdh ENSDARG00000001873 8325 1.488 - - - - - - 0.762 0.726 - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
45. si:ch211-213a13.1 ENSDARG00000090600 381 1.487 0.708 - - - - 0.779 - - - si:ch211-213a13.1 [Source:ZFIN;Acc:ZDB-GENE-050208-471]
46. shc2 ENSDARG00000062080, ENSDARG00000111448 426 1.482 - - - 0.712 - 0.770 - - - SHC (Src homology 2 domain containing) transforming protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-666]
47. si:dkey-228b2.5 1760 1.472 - - - 0.719 - 0.753 - - - si:dkey-228b2.5
48. CR774195.1 ENSDARG00000096831 124 1.47 - - - 0.748 - 0.722 - - -
49. capn2b ENSDARG00000055592 5431 1.459 0.740 - - - - - 0.719 - - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
50. CR388231.1 ENSDARG00000098710 153 1.454 - - - 0.703 - 0.751 - - -
51. paqr6 ENSDARG00000041483 795 1.45 0.701 - - - - - 0.749 - - progestin and adipoQ receptor family member VI [Source:ZFIN;Acc:ZDB-GENE-090714-1]
52. ca2 ENSDARG00000014488 10141 1.447 - - - - - - 0.720 0.727 - carbonic anhydrase II [Source:ZFIN;Acc:ZDB-GENE-031219-5]
53. phospho1 ENSDARG00000008403 729 1.444 - - - - - 0.700 0.744 - - phosphatase, orphan 1 [Source:ZFIN;Acc:ZDB-GENE-040801-198]
54. cyp51 ENSDARG00000042641 458 1.438 - - - - - 0.726 0.712 - - cytochrome P450, family 51 [Source:ZFIN;Acc:ZDB-GENE-040625-2]
55. CU929394.1 CU929394.1 405 1.423 0.702 - - 0.721 - - - - -
56. slc33a1 ENSDARG00000020085 899 1.422 - - - - - 0.718 0.704 - - solute carrier family 33 (acetyl-CoA transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1241]
57. cdipt ENSDARG00000070686 1318 0.995 - 0.995 - - - - - - - CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) [Source:ZFIN;Acc:ZDB-GENE-040426-2536]
58. ergic2 ENSDARG00000051936, ENSDARG00000111918 798 0.995 - 0.995 - - - - - - - ERGIC and golgi 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1331]
59. cylda ENSDARG00000060058 768 0.995 - 0.995 - - - - - - - cylindromatosis (turban tumor syndrome), a [Source:ZFIN;Acc:ZDB-GENE-061108-2]
60. tmem181 ENSDARG00000045910 2288 0.995 - 0.995 - - - - - - - transmembrane protein 181 [Source:ZFIN;Acc:ZDB-GENE-060503-309]
61. cnot11 ENSDARG00000068596 829 0.994 - 0.994 - - - - - - - CCR4-NOT transcription complex, subunit 11 [Source:ZFIN;Acc:ZDB-GENE-030131-8068]
62. si:ch211-87l2.1 si:ch211-87l2.1 2403 0.994 - 0.994 - - - - - - -
63. rab8b ENSDARG00000068628, ENSDARG00000111270, ENSDARG00000114110 607 0.994 - 0.994 - - - - - - - RAB8B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-070620-16]
64. lbx1a ENSDARG00000018321 634 0.994 - 0.994 - - - - - - - ladybird homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040724-40]
65. si:ch211-13f8.1 ENSDARG00000093342 274 0.994 - 0.994 - - - - - - - si:ch211-13f8.1 [Source:ZFIN;Acc:ZDB-GENE-061207-4]
66. capn1a ENSDARG00000052702 1123 0.994 - 0.994 - - - - - - - calpain 1, (mu/I) large subunit a [Source:ZFIN;Acc:ZDB-GENE-040426-1263]
67. brca2 ENSDARG00000079015 410 0.994 - 0.994 - - - - - - - breast cancer 2, early onset [Source:ZFIN;Acc:ZDB-GENE-060510-3]
68. aes ENSDARG00000021805, ENSDARG00000115836 1533 0.994 - 0.994 - - - - - - - amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]
69. lix1l ENSDARG00000063244 2061 0.994 - 0.994 - - - - - - - limb and CNS expressed 1 like [Source:ZFIN;Acc:ZDB-GENE-060503-777]
70. SFT2D2_1 SFT2D2_1 219 0.994 - 0.994 - - - - - - -
71. hic1 ENSDARG00000055493 219 0.994 - 0.994 - - - - - - - hypermethylated in cancer 1 [Source:ZFIN;Acc:ZDB-GENE-040713-2]
72. naa15b ENSDARG00000030368 535 0.994 - 0.994 - - - - - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-6031]
73. hoxa5a ENSDARG00000102501 1667 0.994 - 0.994 - - - - - - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
74. txndc9 ENSDARG00000069853, ENSDARG00000110688 1519 0.994 - 0.994 - - - - - - - thioredoxin domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8569]
75. cnn3b ENSDARG00000029856 4807 0.994 - 0.994 - - - - - - - calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
76. RMDN2 ENSDARG00000078761 717 0.994 - 0.994 - - - - - - - regulator of microtubule dynamics 2 [Source:ZFIN;Acc:ZDB-GENE-111223-1]
77. prkcea ENSDARG00000003008 1118 0.994 - 0.994 - - - - - - - protein kinase C, epsilon a [Source:ZFIN;Acc:ZDB-GENE-030131-8191]
78. ogfr ENSDARG00000037837 1001 0.994 - 0.994 - - - - - - - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
79. igf1rb ENSDARG00000034434, ENSDARG00000110935 813 0.994 - 0.994 - - - - - - - insulin-like growth factor 1b receptor [Source:ZFIN;Acc:ZDB-GENE-020503-2]
80. tnfaip1 ENSDARG00000041565, ENSDARG00000113688, ENSDARG00000115018 553 0.994 - 0.994 - - - - - - - tumor necrosis factor, alpha-induced protein 1 (endothelial) [Source:ZFIN;Acc:ZDB-GENE-030131-5610]
81. si:ch211-251b21.1 ENSDARG00000007275 15724 0.994 - 0.994 - - - - - - - si:ch211-251b21.1 [Source:ZFIN;Acc:ZDB-GENE-060809-5]
82. crabp2a ENSDARG00000073978 868 0.994 - 0.994 - - - - - - - cellular retinoic acid binding protein 2, a [Source:ZFIN;Acc:ZDB-GENE-020320-4]
83. sema3gb ENSDARG00000013607 1531 0.994 - 0.994 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb [Source:ZFIN;Acc:ZDB-GENE-050513-4]
84. CABZ01061717.1 CABZ01061717.1 320 0.994 - 0.994 - - - - - - -
85. ms4a17a.7 ENSDARG00000043796 352 0.994 - 0.994 - - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.7 [Source:ZFIN;Acc:ZDB-GENE-080829-2]
86. recql ENSDARG00000007175 501 0.994 - 0.994 - - - - - - - RecQ helicase-like [Source:ZFIN;Acc:ZDB-GENE-050809-134]
87. lsm1 ENSDARG00000043177 767 0.994 - 0.994 - - - - - - - LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
88. klhl20 ENSDARG00000038801 936 0.994 - 0.994 - - - - - - - kelch-like family member 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1935]
89. uqcrfs1 ENSDARG00000007745 4654 0.994 - 0.994 - - - - - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
90. FAM195A FAM195A 1134 0.994 - 0.994 - - - - - - -
91. stim1a ENSDARG00000060723 1200 0.994 - 0.994 - - - - - - - stromal interaction molecule 1a [Source:ZFIN;Acc:ZDB-GENE-060503-914]
92. plp1a ENSDARG00000103732 3544 0.993 - 0.993 - - - - - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
93. tert ENSDARG00000042637 463 0.993 - 0.993 - - - - - - - telomerase reverse transcriptase [Source:ZFIN;Acc:ZDB-GENE-080405-1]
94. znf740 znf740 2458 0.993 - 0.993 - - - - - - -
95. myo9al1 myo9al1 1194 0.993 - 0.993 - - - - - - -
96. arl2 ENSDARG00000069496, ENSDARG00000112191 1389 0.993 - 0.993 - - - - - - - ADP-ribosylation factor-like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-19]
97. zgc:77158 ENSDARG00000013784 634 0.993 - 0.993 - - - - - - - zgc:77158 [Source:ZFIN;Acc:ZDB-GENE-040426-1799]
98. PPFIBP1_1 PPFIBP1_1 2256 0.993 - 0.993 - - - - - - -
99. rarga ENSDARG00000034117 1238 0.993 - 0.993 - - - - - - - retinoic acid receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-531]
100. ddx6 ENSDARG00000061338 2514 0.993 - 0.993 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]

There are 1655 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA