Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tefm

Gene Name Gene ID Reads Annotation
tefm ENSDARG00000100548, ENSDARG00000114690, ENSDARG00000114872 140 transcription elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060825-345]










Genes with expression patterns similar to tefm

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tefm ENSDARG00000100548, ENSDARG00000114690, ENSDARG00000114872 140 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transcription elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060825-345]
2. si:ch211-188c16.1 ENSDARG00000077288 16 1.68 - 0.876 0.804 - - - - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
3. asl ENSDARG00000033361 295 1.671 - 0.775 - - - 0.896 - - - argininosuccinate lyase [Source:ZFIN;Acc:ZDB-GENE-040426-1152]
4. eif2b1 ENSDARG00000091402, ENSDARG00000114640 139 1.611 - 0.851 - - - - 0.760 - - eukaryotic translation initiation factor 2B, subunit 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040625-25]
5. TMEM235 ENSDARG00000089276 58 1.605 - 0.893 0.712 - - - - - - transmembrane protein 235 [Source:ZFIN;Acc:ZDB-GENE-130603-43]
6. CR848032.1 ENSDARG00000102710 338 1.594 - 0.746 - - - 0.848 - - -
7. micu2 ENSDARG00000009939 557 1.503 - - 0.768 - - 0.735 - - - mitochondrial calcium uptake 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3374]
8. lrp8 ENSDARG00000070074, ENSDARG00000116879 323 1 - 1.000 - - - - - - - low density lipoprotein receptor-related protein 8, apolipoprotein e receptor [Source:ZFIN;Acc:ZDB-GENE-050506-134]
9. rassf7a ENSDARG00000079917 162 0.96 - 0.960 - - - - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 7a [Source:ZFIN;Acc:ZDB-GENE-091013-3]
10. vetz 12 0.96 - 0.960 - - - - - - - vezatin, adherens junctions transmembrane protein, transcript variant X2
11. f2rl2 ENSDARG00000090524 37 0.96 - 0.960 - - - - - - - coagulation factor II (thrombin) receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-110127-4]
12. si:ch211-267e7.2 si:ch211-267e7.2 102 0.958 - 0.958 - - - - - - -
13. dcun1d4 ENSDARG00000092394 258 0.948 - 0.948 - - - - - - - DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041014-248]
14. si:ch73-362m14.2 ENSDARG00000090164 47 0.944 - 0.944 - - - - - - - si:ch73-362m14.2 [Source:ZFIN;Acc:ZDB-GENE-120215-235]
15. si:dkey-4c15.14 ENSDARG00000094410 107 0.942 - 0.942 - - - - - - - si:dkey-4c15.14 [Source:ZFIN;Acc:ZDB-GENE-050420-79]
16. si:dkey-13n15.11 ENSDARG00000078002 8 0.941 - 0.941 - - - - - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
17. si:ch211-214j8.12 ENSDARG00000092556 65 0.941 - 0.941 - - - - - - - si:ch211-214j8.12 [Source:ZFIN;Acc:ZDB-GENE-060526-102]
18. zgc:171599 ENSDARG00000044847 275 0.932 - 0.932 - - - - - - - zgc:171599 [Source:ZFIN;Acc:ZDB-GENE-080219-33]
19. fancc ENSDARG00000055232, ENSDARG00000116499 50 0.932 - 0.932 - - - - - - - FA complementation group C [Source:ZFIN;Acc:ZDB-GENE-060510-2]
20. dmrta2 ENSDARG00000039412 328 0.927 - 0.927 - - - - - - - DMRT-like family A2 [Source:ZFIN;Acc:ZDB-GENE-041116-2]
21. LRRC61 ENSDARG00000077357 55 0.922 - 0.922 - - - - - - - leucine rich repeat containing 61 [Source:ZFIN;Acc:ZDB-GENE-060616-245]
22. mir196b ENSDARG00000081346 35 0.92 - 0.920 - - - - - - - microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
23. ralgps1 ENSDARG00000068370 39 0.919 - 0.919 - - - - - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-070720-16]
24. si:dkey-16n15.3 223 0.919 - 0.919 - - - - - - - si:dkey-16n15.3
25. CABZ01020188.1 CABZ01020188.1 61 0.918 - - - - - - 0.918 - -
26. zgc:136895 zgc:136895 41 0.916 - 0.916 - - - - - - -
27. nalcn ENSDARG00000001835 294 0.915 - 0.915 - - - - - - - sodium leak channel, non-selective [Source:ZFIN;Acc:ZDB-GENE-050410-12]
28. fzd5 ENSDARG00000025420 1082 0.912 - 0.912 - - - - - - - frizzled class receptor 5 [Source:ZFIN;Acc:ZDB-GENE-990415-218]
29. CABZ01068473.1 CABZ01068473.1 67 0.91 - 0.910 - - - - - - -
30. si:dkey-273g18.1 ENSDARG00000097405, ENSDARG00000105439 64 0.906 - 0.906 - - - - - - - si:dkey-273g18.1 [Source:ZFIN;Acc:ZDB-GENE-060503-256]
31. plat ENSDARG00000062707 491 0.906 - 0.906 - - - - - - - plasminogen activator, tissue [Source:ZFIN;Acc:ZDB-GENE-081104-181]
32. Metazoa_SRP_8 Metazoa_SRP_8 153 0.905 - 0.905 - - - - - - -
33. klhl23 ENSDARG00000078475 92 0.903 - 0.903 - - - - - - - kelch-like family member 23 [Source:ZFIN;Acc:ZDB-GENE-081104-458]
34. CR339053.3 CR339053.3 244 0.902 - 0.902 - - - - - - -
35. bloc1s3 ENSDARG00000068828 502 0.902 - 0.902 - - - - - - - biogenesis of lysosomal organelles complex-1, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050913-10]
36. pir ENSDARG00000056638 722 0.9 - 0.900 - - - - - - - pirin [Source:ZFIN;Acc:ZDB-GENE-040718-288]
37. ippk ENSDARG00000003446 51 0.897 - 0.897 - - - - - - - inositol 1,3,4,5,6-pentakisphosphate 2-kinase [Source:ZFIN;Acc:ZDB-GENE-050327-41]
38. CR677591.1 CR677591.1 19 0.897 - 0.897 - - - - - - -
39. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 0.897 - 0.897 - - - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
40. CSPP1 68 0.897 - 0.897 - - - - - - - centrosome and spindle pole associated protein 1, transcript variant X6
41. si:dkeyp-93h6.3 si:dkeyp-93h6.3 31 0.897 - 0.897 - - - - - - -
42. cpb2 ENSDARG00000037144, ENSDARG00000113001 158 0.897 - 0.897 - - - - - - - carboxypeptidase B2 (plasma) [Source:ZFIN;Acc:ZDB-GENE-050522-259]
43. si:dkeyp-100a1.6 ENSDARG00000092141 33 0.897 - 0.897 - - - - - - - si:dkeyp-100a1.6 [Source:ZFIN;Acc:ZDB-GENE-081104-448]
44. si:ch211-241e1.5 ENSDARG00000008906 70 0.897 - 0.897 - - - - - - - si:ch211-241e1.5 [Source:ZFIN;Acc:ZDB-GENE-030131-6298]
45. pik3ip1 ENSDARG00000003281 339 0.897 - - - - - 0.897 - - - phosphoinositide-3-kinase interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-031030-14]
46. C11H1orf158 C11H1orf158 133 0.896 - 0.896 - - - - - - -
47. grapa ENSDARG00000005414 29 0.894 - 0.894 - - - - - - - GRB2 related adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-050522-347]
48. SH2D6 SH2D6 26 0.894 - 0.894 - - - - - - -
49. CABZ01081748.1 ENSDARG00000102139 31 0.894 - 0.894 - - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
50. KCNJ10 KCNJ10 62 0.894 - 0.894 - - - - - - -
51. yif1b ENSDARG00000040505 47 0.894 - 0.894 - - - - - - - Yip1 interacting factor homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-16]
52. tsc1a ENSDARG00000026048, ENSDARG00000113789, ENSDARG00000113892 439 0.893 - 0.893 - - - - - - - TSC complex subunit 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9111]
53. UBL7 UBL7 197 0.893 - 0.893 - - - - - - -
54. si:dkey-54g2.6 si:dkey-54g2.6 252 0.893 - 0.893 - - - - - - -
55. hist2h3c ENSDARG00000094154 124 0.891 - 0.891 - - - - - - - histone cluster 2, H3c [Source:ZFIN;Acc:ZDB-GENE-070424-8]
56. celf3b ENSDARG00000006983 171 0.887 - 0.887 - - - - - - - cugbp, Elav-like family member 3b [Source:ZFIN;Acc:ZDB-GENE-110408-50]
57. fabp10b ENSDARG00000091101 44 0.887 - 0.887 - - - - - - - fatty acid binding protein 10b, liver basic [Source:ZFIN;Acc:ZDB-GENE-100217-2]
58. doc2d ENSDARG00000079962 76 0.885 - 0.885 - - - - - - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
59. CU469544.1 CU469544.1 219 0.885 - 0.885 - - - - - - -
60. calcoco2 ENSDARG00000052515 81 0.885 - 0.885 - - - - - - - calcium binding and coiled-coil domain 2 [Source:ZFIN;Acc:ZDB-GENE-050522-346]
61. arl2bp ENSDARG00000025383, ENSDARG00000114401 576 0.885 - 0.885 - - - - - - - ADP-ribosylation factor-like 2 binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1604]
62. atp8b2 ENSDARG00000099216 21 0.885 - 0.885 - - - - - - - ATPase phospholipid transporting 8B2 [Source:ZFIN;Acc:ZDB-GENE-030131-2474]
63. pign ENSDARG00000077532 123 0.884 - 0.884 - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class N [Source:ZFIN;Acc:ZDB-GENE-080204-114]
64. dclre1c ENSDARG00000045704, ENSDARG00000110444, ENSDARG00000113866 100 0.884 - 0.884 - - - - - - - DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041210-72]
65. C4H12orf55 C4H12orf55 14 0.883 - 0.883 - - - - - - -
66. BX510934.1 ENSDARG00000087544 140 0.883 0.883 - - - - - - - -
67. MAL2_1 MAL2_1 6 0.876 - 0.876 - - - - - - -
68. inppl1b ENSDARG00000001442 41 0.876 - 0.876 - - - - - - - inositol polyphosphate phosphatase-like 1b [Source:ZFIN;Acc:ZDB-GENE-030616-75]
69. dnah7 ENSDARG00000060165 21 0.876 - 0.876 - - - - - - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]
70. TSPEAR TSPEAR 9 0.876 - 0.876 - - - - - - -
71. fopnl ENSDARG00000071198 1002 0.876 - 0.876 - - - - - - - fgfr1op N-terminal like [Source:ZFIN;Acc:ZDB-GENE-101124-1]
72. tnnt2a ENSDARG00000020610 313 0.876 - 0.876 - - - - - - - troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
73. HIST1H2BA_1 ENSDARG00000116654 37 0.876 - 0.876 - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
74. si:ch211-76l23.4 ENSDARG00000096242 202 0.876 - 0.876 - - - - - - - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
75. zgc:173729 3 0.876 - 0.876 - - - - - - - zgc:173729
76. runx2b ENSDARG00000059233 106 0.876 - 0.876 - - - - - - - runt-related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-040629-4]
77. CABZ01076533.1 CABZ01076533.1 2 0.876 - 0.876 - - - - - - -
78. CABZ01083834.1 CABZ01083834.1 38 0.876 - 0.876 - - - - - - -
79. EGR4 ENSDARG00000077799 34 0.876 - 0.876 - - - - - - - early growth response 4 [Source:ZFIN;Acc:ZDB-GENE-080204-90]
80. CABZ01067072.1 CABZ01067072.1 17 0.876 - 0.876 - - - - - - -
81. ca4b ENSDARG00000042293 5 0.876 - 0.876 - - - - - - - carbonic anhydrase IV b [Source:ZFIN;Acc:ZDB-GENE-080815-5]
82. anxa2b ENSDARG00000053625, ENSDARG00000116775, ENSDARG00000117092 55 0.876 - 0.876 - - - - - - - annexin A2b [Source:ZFIN;Acc:ZDB-GENE-030131-1089]
83. dlx1a ENSDARG00000013125 142 0.876 - 0.876 - - - - - - - distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
84. sorcs3b ENSDARG00000077349 72 0.876 - 0.876 - - - - - - - sortilin related VPS10 domain containing receptor 3b [Source:ZFIN;Acc:ZDB-GENE-131121-455]
85. SNAPC2 ENSDARG00000036473 158 0.876 - 0.876 - - - - - - - small nuclear RNA activating complex, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-120328-2]
86. FP102801.1 FP102801.1 294 0.876 - - - - - 0.876 - - -
87. nr1h4 ENSDARG00000057741, ENSDARG00000113600 24 0.876 - 0.876 - - - - - - - nuclear receptor subfamily 1, group H, member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-313]
88. slc37a1 ENSDARG00000086103 16 0.876 - 0.876 - - - - - - - solute carrier family 37 (glucose-6-phosphate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-041114-151]
89. Mar-04 Mar-04 21 0.876 - 0.876 - - - - - - -
90. si:dkey-85n7.8 ENSDARG00000095793 31 0.876 - 0.876 - - - - - - - si:dkey-85n7.8 [Source:ZFIN;Acc:ZDB-GENE-110411-127]
91. si:dkey-165g20.2 si:dkey-165g20.2 3 0.876 - 0.876 - - - - - - -
92. skila ENSDARG00000023933 2 0.876 - 0.876 - - - - - - - SKI-like proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-070912-548]
93. f9b ENSDARG00000029493, ENSDARG00000111567 119 0.876 - 0.876 - - - - - - - coagulation factor IXb [Source:ZFIN;Acc:ZDB-GENE-060421-7346]
94. FP074874.1 ENSDARG00000102679 40 0.876 - 0.876 - - - - - - - si:ch73-158p21.7 [Source:NCBI gene;Acc:100331388]
95. camk1ga ENSDARG00000044526 5 0.876 - 0.876 - - - - - - - calcium/calmodulin-dependent protein kinase IGa [Source:ZFIN;Acc:ZDB-GENE-030131-7594]
96. LRFN2_1 LRFN2_1 17 0.876 - 0.876 - - - - - - -
97. il11b ENSDARG00000058557 17 0.876 - 0.876 - - - - - - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
98. DEF6 DEF6 19 0.876 - 0.876 - - - - - - -
99. CACNA1H CACNA1H 34 0.876 - 0.876 - - - - - - -
100. pdgfra ENSDARG00000070494, ENSDARG00000113952 6 0.876 - 0.876 - - - - - - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]

There are 622 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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