Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tdrd3

Gene Name Gene ID Reads Annotation
tdrd3 ENSDARG00000025421 633 tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]










Genes with expression patterns similar to tdrd3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tdrd3 ENSDARG00000025421 633 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
2. vps39 ENSDARG00000074471 684 2.403 - 0.751 - 0.923 - - - 0.729 - vacuolar protein sorting 39 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-080530-2]
3. nuf2 ENSDARG00000034624 2252 2.268 - 0.829 - - - - 0.702 0.737 - NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
4. bbs4 ENSDARG00000063522 247 1.941 - 0.984 - 0.957 - - - - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
5. CREM CREM 1333 1.932 - - - 0.935 - 0.997 - - -
6. zdhhc6 ENSDARG00000075721 1494 1.916 - 0.968 - 0.948 - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
7. plagx ENSDARG00000036855 3768 1.907 - - - 0.918 - 0.989 - - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
8. znf710a ENSDARG00000014680 582 1.896 - 0.909 - 0.987 - - - - - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
9. PARD3B PARD3B 401 1.877 - 0.904 - 0.973 - - - - -
10. si:ch211-208h7.4 si:ch211-208h7.4 1334 1.859 - 0.860 - - - 0.999 - - -
11. epb41l4a ENSDARG00000040087 1013 1.856 - 0.988 - 0.868 - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:ZFIN;Acc:ZDB-GENE-990415-20]
12. yipf1 ENSDARG00000014474 542 1.847 - - - - - 0.999 - 0.848 - Yip1 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-040822-35]
13. cyb561a3a ENSDARG00000056281 667 1.846 - - - - - 1.000 - 0.846 - cytochrome b561 family, member A3a [Source:ZFIN;Acc:ZDB-GENE-060526-374]
14. ctdspla ENSDARG00000071673 1447 1.822 - 0.981 - 0.841 - - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
15. zgc:165515 ENSDARG00000116300 182 1.818 - - - 0.985 - - - 0.833 - zgc:165515 [Source:ZFIN;Acc:ZDB-GENE-030131-1772]
16. rac3b ENSDARG00000020795 1523 1.817 - 0.966 - 0.851 - - - - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
17. lrrfip2 ENSDARG00000010400 2633 1.808 - 0.862 - 0.946 - - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
18. cxxc1 cxxc1 914 1.8 - 0.907 - 0.893 - - - - -
19. SV2A ENSDARG00000059945 1278 1.785 - - - 0.794 - 0.991 - - - synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
20. SLC6A16 SLC6A16 630 1.784 - - - - - 0.999 - 0.785 -
21. CR548630.1 CR548630.1 3301 1.779 - 0.883 - 0.896 - - - - -
22. exd2 ENSDARG00000016117 342 1.758 - - - 0.964 - - - 0.794 - exonuclease 3'-5' domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6387]
23. olfml3b ENSDARG00000062171 264 1.753 - 0.968 - - - - - 0.785 - olfactomedin-like 3b [Source:ZFIN;Acc:ZDB-GENE-050302-161]
24. znrd1 ENSDARG00000036070 684 1.745 0.772 0.973 - - - - - - - zinc ribbon domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-131]
25. ldb1a ENSDARG00000010137 3035 1.741 - 0.969 - 0.772 - - - - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
26. snai1a ENSDARG00000056995 1427 1.72 - 0.855 - 0.865 - - - - - snail family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-990415-255]
27. rcan2 ENSDARG00000021869 874 1.718 - - - - - 0.992 - 0.726 - regulator of calcineurin 2 [Source:ZFIN;Acc:ZDB-GENE-040516-17]
28. TTC17 ENSDARG00000044812 124 1.717 0.733 - - 0.984 - - - - - tetratricopeptide repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-100422-15]
29. dmbx1b ENSDARG00000002510 351 1.715 - - - 0.887 - - - 0.828 - diencephalon/mesencephalon homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050417-97]
30. zdhhc17 ENSDARG00000070441 1073 1.712 - 0.782 - 0.930 - - - - - zinc finger, DHHC-type containing 17 [Source:ZFIN;Acc:ZDB-GENE-070424-194]
31. nat15 ENSDARG00000061185 396 1.712 - 0.747 - 0.965 - - - - - N-acetyltransferase 15 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-041111-143]
32. KPNA6 ENSDARG00000044980 543 1.705 - - - 0.957 - - - 0.748 - karyopherin alpha 6 (importin alpha 7) [Source:ZFIN;Acc:ZDB-GENE-130530-626]
33. bcs1l ENSDARG00000012295 664 1.692 - 0.931 - 0.761 - - - - - BC1 (ubiquinol-cytochrome c reductase) synthesis-like [Source:ZFIN;Acc:ZDB-GENE-040426-938]
34. gspt1 ENSDARG00000031048, ENSDARG00000109388 2735 1.682 - 0.951 - 0.731 - - - - - G1 to S phase transition 1 [Source:ZFIN;Acc:ZDB-GENE-040822-36]
35. BX005008.2 BX005008.2 708 1.671 - 0.892 - - - - - 0.779 -
36. fezf2 ENSDARG00000070677 224 1.671 - - - 0.889 - - - 0.782 - FEZ family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-001103-3]
37. tab1 ENSDARG00000036613 445 1.662 - 0.859 - - - - - 0.803 - TGF-beta activated kinase 1/MAP3K7 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060628-1]
38. epha7 ENSDARG00000004635, ENSDARG00000112305 1373 1.659 0.807 - - 0.852 - - - - - eph receptor A7 [Source:ZFIN;Acc:ZDB-GENE-030131-3745]
39. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 1.656 - 0.743 - 0.913 - - - - - structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
40. RPH3A_1 RPH3A_1 399 1.649 - 0.928 - - - - - 0.721 -
41. ZC3H12A_1 ZC3H12A_1 558 1.642 - 0.810 - - - - - 0.832 -
42. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.637 - 0.791 - 0.846 - - - - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
43. DHX32 DHX32 181 1.634 - - - 0.918 - - 0.716 - -
44. usp1 ENSDARG00000056414 1816 1.621 - 0.872 - 0.749 - - - - - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
45. kifap3a ENSDARG00000008639 721 1.618 - - - 0.882 - - - 0.736 - kinesin-associated protein 3a [Source:ZFIN;Acc:ZDB-GENE-040912-74]
46. smn1 ENSDARG00000018494 1024 1.615 - 0.863 - 0.752 - - - - - survival of motor neuron 1, telomeric [Source:ZFIN;Acc:ZDB-GENE-990715-16]
47. WAPAL WAPAL 1888 1.607 - 0.780 - 0.827 - - - - -
48. SNCAIP ENSDARG00000100198 522 1.594 - - - 0.864 - - 0.730 - - synuclein, alpha interacting protein [Source:ZFIN;Acc:ZDB-GENE-080204-71]
49. COQ10A COQ10A 426 1.593 - - - - - - 0.772 0.821 -
50. larp7 ENSDARG00000017315 1194 1.591 - - - 0.879 - - 0.712 - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
51. lrig1 ENSDARG00000075625 2027 1.588 - 0.827 - 0.761 - - - - - leucine-rich repeats and immunoglobulin-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-031113-23]
52. zzz3 ENSDARG00000077581 1343 1.584 - 0.860 - 0.724 - - - - - zinc finger, ZZ-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6450]
53. DSN1 ENSDARG00000089922 269 1.568 0.734 - - - - - - 0.834 - DSN1 homolog, MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-170110-2]
54. usp42 ENSDARG00000077300 926 1.555 - - - 0.843 - - - 0.712 - ubiquitin specific peptidase 42 [Source:ZFIN;Acc:ZDB-GENE-030131-5739]
55. tmem234 ENSDARG00000078333 488 1.547 - - - - - - 0.726 0.821 - transmembrane protein 234 [Source:ZFIN;Acc:ZDB-GENE-090313-326]
56. WDR53 ENSDARG00000079659 485 1.545 - - - 0.803 - - - 0.742 - WD repeat domain 53 [Source:ZFIN;Acc:ZDB-GENE-131121-294]
57. insrb ENSDARG00000071524 1820 1.545 - 0.830 - 0.715 - - - - - insulin receptor b [Source:ZFIN;Acc:ZDB-GENE-020503-4]
58. ppp2r1b ppp2r1b 3469 1.542 - 0.715 - 0.827 - - - - -
59. rims2b ENSDARG00000102690 275 1.538 - - - - - - 0.723 0.815 - regulating synaptic membrane exocytosis 2b [Source:ZFIN;Acc:ZDB-GENE-060503-893]
60. CLSPN 2054 1.498 - - - - - - 0.715 0.783 - claspin
61. sass6 ENSDARG00000058346 225 1.498 - - - - - - 0.708 0.790 - SAS-6 centriolar assembly protein [Source:ZFIN;Acc:ZDB-GENE-040426-2784]
62. mrpl1 ENSDARG00000054606, ENSDARG00000114027 1457 1.487 - 0.761 - 0.726 - - - - - mitochondrial ribosomal protein L1 [Source:ZFIN;Acc:ZDB-GENE-060526-311]
63. ttc13 ENSDARG00000063242 1360 1.483 - 0.746 - - - - - 0.737 - tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
64. si:ch211-282j22.3 ENSDARG00000010524 1007 1.465 - - - 0.763 - - 0.702 - - si:ch211-282j22.3 [Source:ZFIN;Acc:ZDB-GENE-091113-49]
65. NAIF1_1 NAIF1_1 1336 1.465 0.701 0.764 - - - - - - -
66. ubp1 ENSDARG00000018000 1047 1.456 - - - 0.719 - - - 0.737 - upstream binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-870]
67. zgc:112484 zgc:112484 780 1 - - - - - 1.000 - - -
68. TRIM35_3 TRIM35_3 172 1 - - - - - 1.000 - - -
69. nicn1 ENSDARG00000069677, ENSDARG00000116330 790 1 - - - - - 1.000 - - - nicolin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-129]
70. zmynd8 ENSDARG00000007601 405 1 - - - - - 1.000 - - - zinc finger, MYND-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-041119-1]
71. amt ENSDARG00000010862, ENSDARG00000113280 367 1 - - - - - 1.000 - - - aminomethyltransferase [Source:ZFIN;Acc:ZDB-GENE-041010-114]
72. mrpl41 ENSDARG00000002264 1756 1 - - - - - 1.000 - - - mitochondrial ribosomal protein L41 [Source:ZFIN;Acc:ZDB-GENE-050522-200]
73. nog2 ENSDARG00000043066 233 1 - - - - - 1.000 - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
74. dfna5 dfna5 361 1 - - - - - 1.000 - - -
75. C9H2orf76 C9H2orf76 559 1 - - - - - 1.000 - - -
76. fktn ENSDARG00000059437, ENSDARG00000109351 340 0.999 - - - - - 0.999 - - - fukutin [Source:ZFIN;Acc:ZDB-GENE-070410-96]
77. tfg ENSDARG00000003641, ENSDARG00000115188 3834 0.999 - - - - - 0.999 - - - trk-fused gene [Source:ZFIN;Acc:ZDB-GENE-030131-8410]
78. rc3h1 rc3h1 1087 0.999 - - - - - 0.999 - - -
79. PRIM2 ENSDARG00000052721 825 0.999 - - - - - 0.999 - - - DNA primase subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-471]
80. mcts1 ENSDARG00000025972 4662 0.999 - - - - - 0.999 - - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
81. xirp1 ENSDARG00000030722 1486 0.999 - - - - - 0.999 - - - xin actin binding repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050221-2]
82. sec63 ENSDARG00000017740 3789 0.999 - - - - - 0.999 - - - SEC63 homolog, protein translocation regulator [Source:ZFIN;Acc:ZDB-GENE-040718-328]
83. hdac9b ENSDARG00000056642 1148 0.999 - - - - - 0.999 - - - histone deacetylase 9b [Source:ZFIN;Acc:ZDB-GENE-040109-7]
84. trim44 ENSDARG00000051761 509 0.999 - - - - - 0.999 - - - tripartite motif containing 44 [Source:ZFIN;Acc:ZDB-GENE-050522-37]
85. pld2 ENSDARG00000034262 952 0.999 - - - - - 0.999 - - - phospholipase D2 [Source:ZFIN;Acc:ZDB-GENE-060216-4]
86. rbm42 ENSDARG00000039910 1111 0.999 - - - - - 0.999 - - - RNA binding motif protein 42 [Source:ZFIN;Acc:ZDB-GENE-040809-2]
87. clip2 ENSDARG00000059596 529 0.999 - - - - - 0.999 - - - CAP-GLY domain containing linker protein 2 [Source:ZFIN;Acc:ZDB-GENE-100727-3]
88. si:dkey-3d4.3 ENSDARG00000074079 365 0.999 - - - - - 0.999 - - - si:dkey-3d4.3 [Source:ZFIN;Acc:ZDB-GENE-070912-527]
89. pbxip1b ENSDARG00000011824 3726 0.999 - - - - - 0.999 - - - pre-B-cell leukemia homeobox interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2032]
90. pgm2 ENSDARG00000018178 985 0.999 - - - - - 0.999 - - - phosphoglucomutase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2218]
91. BRCC3 ENSDARG00000098242 1123 0.999 - - - - - 0.999 - - - BRCA1/BRCA2-containing complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-100215-1]
92. CASKIN2_1 CASKIN2_1 2299 0.999 - - - - - 0.999 - - -
93. las1l ENSDARG00000062457, ENSDARG00000114475 3987 0.999 - - - - - 0.999 - - - LAS1-like, ribosome biogenesis factor [Source:ZFIN;Acc:ZDB-GENE-030131-3625]
94. eva1a ENSDARG00000061405 896 0.999 - - - - - 0.999 - - - eva-1 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-060929-200]
95. vac14 ENSDARG00000014303 941 0.999 - - - - - 0.999 - - - vac14 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-82]
96. si:ch211-163l21.8 ENSDARG00000042899 724 0.999 - - - - - 0.999 - - - si:ch211-163l21.8 [Source:ZFIN;Acc:ZDB-GENE-041008-93]
97. pank2 ENSDARG00000003311 881 0.999 - - - - - 0.999 - - - pantothenate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1952]
98. VPS37C ENSDARG00000031836 906 0.998 - - - - - 0.998 - - - vacuolar protein sorting 37 homolog C (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061110-126]
99. PROSER1 ENSDARG00000086302 1935 0.998 - - - - - 0.998 - - - proline and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-111003-1]
100. lap3 ENSDARG00000061981 1188 0.998 - - - - - 0.998 - - - leucine aminopeptidase 3 [Source:ZFIN;Acc:ZDB-GENE-060719-1]

There are 1554 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA