Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tdp2a

Gene Name Gene ID Reads Annotation
tdp2a ENSDARG00000069941 10 tyrosyl-DNA phosphodiesterase 2a [Source:ZFIN;Acc:ZDB-GENE-110218-1]










Genes with expression patterns similar to tdp2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tdp2a ENSDARG00000069941 10 3 - 1.000 1.000 1.000 - - - - - tyrosyl-DNA phosphodiesterase 2a [Source:ZFIN;Acc:ZDB-GENE-110218-1]
2. mfge8a ENSDARG00000015349 66 1.685 - 0.941 0.744 - - - - - - milk fat globule-EGF factor 8 protein a [Source:ZFIN;Acc:ZDB-GENE-050327-9]
3. star ENSDARG00000006137 149 1.476 - 0.731 - 0.745 - - - - - steroidogenic acute regulatory protein [Source:ZFIN;Acc:ZDB-GENE-001120-3]
4. rs1 rs1 70 1.468 - 0.731 0.737 - - - - - -
5. tnr ENSDARG00000020771 20 1 - 1.000 - - - - - - - tenascin R (restrictin, janusin) [Source:ZFIN;Acc:ZDB-GENE-030804-1]
6. scn1lab ENSDARG00000062744 155 1 - 1.000 - - - - - - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
7. KCTD5 KCTD5 109 1 - 1.000 - - - - - - -
8. fam49a ENSDARG00000006672 939 1 - 1.000 - - - - - - - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
9. RAB39B RAB39B 482 1 - 1.000 - - - - - - -
10. nr0b1 ENSDARG00000056541 35 1 - 1.000 - - - - - - - nuclear receptor subfamily 0, group B, member 1 [Source:ZFIN;Acc:ZDB-GENE-070130-1]
11. npffr1l3 ENSDARG00000010712 18 1 - 1.000 - - - - - - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
12. pcp4l1 ENSDARG00000023181 117 1 - 1.000 - - - - - - - Purkinje cell protein 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040724-35]
13. RFFL_1 RFFL_1 157 1 - 1.000 - - - - - - -
14. elovl4b ENSDARG00000027495 107 1 - 1.000 - - - - - - - ELOVL fatty acid elongase 4b [Source:ZFIN;Acc:ZDB-GENE-030131-7672]
15. cnih3 ENSDARG00000014953 25 1 - 1.000 - - - - - - - cornichon family AMPA receptor auxiliary protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-180]
16. mir92a-1 20 1 - 1.000 - - - - - - - microRNA 92a-1
17. grnas ENSDARG00000091885 71 1 - 1.000 - - - - - - - granulin antisense [Source:ZFIN;Acc:ZDB-GENE-060104-1]
18. uts1 ENSDARG00000014927 35 1 - 1.000 - - - - - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
19. mettl21d mettl21d 94 1 - 1.000 - - - - - - -
20. CSMD1 CSMD1 15 1 - 1.000 - - - - - - -
21. phf20a ENSDARG00000002750 90 1 - 1.000 - - - - - - - PHD finger protein 20, a [Source:ZFIN;Acc:ZDB-GENE-070912-270]
22. APEH ENSDARG00000008703 73 1 - 1.000 - - - - - - - acylaminoacyl-peptide hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-9870]
23. FAM161A ENSDARG00000089742 41 1 - 1.000 - - - - - - - family with sequence similarity 161, member A [Source:ZFIN;Acc:ZDB-GENE-110310-1]
24. zgc:174224_2 ENSDARG00000093875 22 1 - 1.000 - - - - - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
25. mapre3a ENSDARG00000020231 100 1 - 1.000 - - - - - - - microtubule-associated protein, RP/EB family, member 3a [Source:ZFIN;Acc:ZDB-GENE-050913-88]
26. si:ch211-168h21.3 10 1 - 1.000 - - - - - - - si:ch211-168h21.3
27. SLC16A1 SLC16A1 37 1 - 1.000 - - - - - - -
28. lrrc4.2 ENSDARG00000003020 235 0.949 - 0.949 - - - - - - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
29. pdk3b ENSDARG00000099791 50 0.949 - 0.949 - - - - - - - pyruvate dehydrogenase kinase, isozyme 3b [Source:ZFIN;Acc:ZDB-GENE-070112-1892]
30. etaa1 ENSDARG00000074915 123 0.949 - 0.949 - - - - - - - ETAA1, ATR kinase activator [Source:ZFIN;Acc:ZDB-GENE-080204-12]
31. dfnb31a 166 0.943 - 0.943 - - - - - - - deafness, autosomal recessive 31a, transcript variant X3
32. BX936443.2 BX936443.2 28 0.941 - 0.941 - - - - - - -
33. lhfpl4a ENSDARG00000111810 206 0.941 - 0.941 - - - - - - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
34. xkr7 ENSDARG00000026333 18 0.941 - 0.941 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
35. BX247898.1 BX247898.1 75 0.941 - 0.941 - - - - - - -
36. rims2b ENSDARG00000102690 275 0.941 - 0.941 - - - - - - - regulating synaptic membrane exocytosis 2b [Source:ZFIN;Acc:ZDB-GENE-060503-893]
37. sc:d217 ENSDARG00000079645 32 0.941 - 0.941 - - - - - - - sc:d217 [Source:ZFIN;Acc:ZDB-GENE-080303-15]
38. gig2n gig2n 5 0.941 - 0.941 - - - - - - -
39. plch2a ENSDARG00000059960 222 0.941 - 0.941 - - - - - - - phospholipase C, eta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6367]
40. si:ch73-190m4.1 ENSDARG00000075785 50 0.94 - 0.940 - - - - - - - si:ch73-190m4.1 [Source:ZFIN;Acc:ZDB-GENE-090311-56]
41. si:dkey-14d8.9 si:dkey-14d8.9 66 0.939 - 0.939 - - - - - - -
42. PEG3_30 PEG3_30 60 0.937 - 0.937 - - - - - - -
43. znf512 ENSDARG00000041910 20 0.937 - 0.937 - - - - - - - zinc finger protein 512 [Source:ZFIN;Acc:ZDB-GENE-041014-346]
44. CABZ01080599.2 CABZ01080599.2 192 0.929 - 0.929 - - - - - - -
45. mnx2a ENSDARG00000042106 939 0.911 - 0.911 - - - - - - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
46. fam20c fam20c 603 0.906 - 0.906 - - - - - - -
47. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 0.896 - 0.896 - - - - - - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
48. nkx2.9 ENSDARG00000020332 357 0.892 - 0.892 - - - - - - - NK2 transcription factor related, locus 9 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4340]
49. pfkfb1 ENSDARG00000037140 182 0.885 - 0.885 - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5664]
50. si:ch211-56a11.2 ENSDARG00000093677 196 0.885 - 0.885 - - - - - - - si:ch211-56a11.2 [Source:ZFIN;Acc:ZDB-GENE-091204-123]
51. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 0.884 - 0.884 - - - - - - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
52. BX957337.1 BX957337.1 1685 0.878 - 0.878 - - - - - - -
53. atp1b4 ENSDARG00000053262 1337 0.877 - 0.877 - - - - - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
54. SSX2IP SSX2IP 316 0.874 - 0.874 - - - - - - -
55. FP565458.1 FP565458.1 61 0.865 - 0.865 - - - - - - -
56. si:dkey-97a13.9 si:dkey-97a13.9 169 0.865 - 0.865 - - - - - - -
57. CDHR2_1 CDHR2_1 12 0.86 - 0.860 - - - - - - -
58. gpn3 ENSDARG00000069525 499 0.856 - 0.856 - - - - - - - GPN-loop GTPase 3 [Source:ZFIN;Acc:ZDB-GENE-040724-141]
59. nubpl ENSDARG00000054821 232 0.855 - 0.855 - - - - - - - nucleotide binding protein-like [Source:ZFIN;Acc:ZDB-GENE-040718-140]
60. si:ch73-103b9.2 ENSDARG00000092489 89 0.855 - 0.855 - - - - - - - si:ch73-103b9.2 [Source:ZFIN;Acc:ZDB-GENE-070705-199]
61. ascl1a ENSDARG00000038386 1290 0.854 - 0.854 - - - - - - - achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
62. CPNE8_1 CPNE8_1 140 0.849 - 0.849 - - - - - - -
63. zgc:136493 ENSDARG00000029259 132 0.849 - 0.849 - - - - - - - zgc:136493 [Source:ZFIN;Acc:ZDB-GENE-060512-216]
64. CT955963.1 ENSDARG00000100370 23 0.849 - 0.849 - - - - - - -
65. elavl4 ENSDARG00000045639 998 0.849 - 0.849 - - - - - - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
66. faxcb ENSDARG00000078981 249 0.849 - 0.849 - - - - - - - failed axon connections homolog b [Source:ZFIN;Acc:ZDB-GENE-100922-19]
67. si:ch211-190k17.31 si:ch211-190k17.31 29 0.849 - 0.849 - - - - - - -
68. C5H9orf171 C5H9orf171 34 0.842 - 0.842 - - - - - - -
69. CLIP3 ENSDARG00000054456 734 0.842 - 0.842 - - - - - - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
70. sox19b ENSDARG00000040266 532 0.841 - 0.841 - - - - - - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
71. ODF3L2 40 0.837 - - 0.837 - - - - - - outer dense fiber of sperm tails 3-like 2
72. nmnat2 ENSDARG00000004580 370 0.837 - 0.837 - - - - - - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
73. phf23b ENSDARG00000036305 1073 0.833 - 0.833 - - - - - - - PHD finger protein 23b [Source:ZFIN;Acc:ZDB-GENE-030131-5895]
74. dnm2a ENSDARG00000069937 32 0.833 - 0.833 - - - - - - - dynamin 2a [Source:ZFIN;Acc:ZDB-GENE-050913-84]
75. slc22a7a ENSDARG00000056028 2426 0.828 - 0.828 - - - - - - - solute carrier family 22 (organic anion transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-050506-52]
76. dlg2 ENSDARG00000099323 162 0.828 - 0.828 - - - - - - - discs, large homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050221-3]
77. asb16 ENSDARG00000056468, ENSDARG00000110292 126 0.827 - - 0.827 - - - - - - ankyrin repeat and SOCS box containing 16 [Source:ZFIN;Acc:ZDB-GENE-031031-3]
78. cacna2d3 ENSDARG00000078760 211 0.827 - - 0.827 - - - - - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
79. MXRA5 MXRA5 58 0.822 - 0.822 - - - - - - -
80. rab3c ENSDARG00000014462, ENSDARG00000042803 508 0.821 - 0.821 - - - - - - - RAB3C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-263]
81. pknox2 ENSDARG00000055349 784 0.819 - 0.819 - - - - - - - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
82. glrbb ENSDARG00000052769, ENSDARG00000113828 467 0.815 - 0.815 - - - - - - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
83. itm2ca ENSDARG00000043448 1265 0.814 - 0.814 - - - - - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
84. kcnd3 ENSDARG00000056101 324 0.813 - 0.813 - - - - - - - potassium voltage-gated channel, Shal-related subfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5626]
85. hemk1 ENSDARG00000078894 397 0.811 - 0.811 - - - - - - - HemK methyltransferase family member 1 [Source:ZFIN;Acc:ZDB-GENE-050208-185]
86. cldn15la ENSDARG00000016081 197 0.81 - 0.810 - - - - - - - claudin 15-like a [Source:ZFIN;Acc:ZDB-GENE-010328-12]
87. CABZ01044048.1 ENSDARG00000011463 20 0.81 - - 0.810 - - - - - - coagulation factor IX-like [Source:NCBI gene;Acc:100004411]
88. GALNT16 ENSDARG00000053190 250 0.81 - 0.810 - - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-131120-189]
89. si:ch211-64i20.3 ENSDARG00000089934, ENSDARG00000105063 42 0.809 - - - 0.809 - - - - - si:ch211-64i20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-55]
90. si:ch73-173m3.3 si:ch73-173m3.3 425 0.805 - 0.805 - - - - - - -
91. sox21b ENSDARG00000008540 1460 0.804 - 0.804 - - - - - - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
92. si:dkey-241l7.10 si:dkey-241l7.10 38 0.803 - 0.803 - - - - - - -
93. BCL2 BCL2 122 0.803 - 0.803 - - - - - - -
94. ugt5g1 ENSDARG00000032862, ENSDARG00000111242 222 0.803 - 0.803 - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide G1 [Source:ZFIN;Acc:ZDB-GENE-080305-10]
95. serac1 ENSDARG00000056121, ENSDARG00000116580 196 0.803 - 0.803 - - - - - - - serine active site containing 1 [Source:ZFIN;Acc:ZDB-GENE-040616-1]
96. trim35-36 trim35-36 19 0.803 - 0.803 - - - - - - -
97. clcn6 ENSDARG00000032577 174 0.803 - 0.803 - - - - - - - chloride channel 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2056]
98. prdm12b ENSDARG00000007430 914 0.8 - 0.800 - - - - - - - PR domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-041114-172]
99. mpped2 ENSDARG00000034443, ENSDARG00000114674 527 0.799 - 0.799 - - - - - - - metallophosphoesterase domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8903]
100. si:dkey-164n2.1 47 0.796 - 0.796 - - - - - - - si:dkey-164n2.1, transcript variant X1

There are 398 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA