Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tdp1

Gene Name Gene ID Reads Annotation
tdp1 ENSDARG00000073866 214 tyrosyl-DNA phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-090909-1]










Genes with expression patterns similar to tdp1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tdp1 ENSDARG00000073866 214 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tyrosyl-DNA phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-090909-1]
2. wu:fe05a04 ENSDARG00000087530 843 1.828 0.893 - - - - - 0.935 - - wu:fe05a04 [Source:ZFIN;Acc:ZDB-GENE-030131-4873]
3. inadl 80 1.78 0.839 - - - - - 0.941 - - InaD-like (Drosophila), transcript variant X4
4. C3H19orf66 C3H19orf66 20 1.771 0.833 0.938 - - - - - - -
5. TTBK1 TTBK1 120 1.722 - 0.781 - - - - 0.941 - -
6. KBTBD13 ENSDARG00000076449 10 1.717 - 0.781 - - - - 0.936 - - kelch repeat and BTB (POZ) domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-140106-122]
7. prkcba ENSDARG00000008723, ENSDARG00000116813 30 1.714 - 0.781 - - - - 0.933 - - protein kinase C, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1354]
8. si:dkey-11f4.14 ENSDARG00000098461 35 1.713 - - - - - - 0.761 - 0.952 si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
9. zgc:158852 ENSDARG00000102076 65 1.706 - - - - - - 0.945 - 0.761 zgc:158852 [Source:ZFIN;Acc:ZDB-GENE-070112-972]
10. zgc:123295 ENSDARG00000056324 361 1.704 0.791 - - - - - 0.913 - - zgc:123295 [Source:ZFIN;Acc:ZDB-GENE-051127-11]
11. ift57 ENSDARG00000021022 288 1.701 - - - - - - 0.869 - 0.832 intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
12. HSBP1 HSBP1 158 1.698 0.846 - - - - - 0.852 - -
13. eno4 ENSDARG00000070598 78 1.687 - 0.781 - - - - - - 0.906 enolase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-677]
14. ncbp2 ENSDARG00000014898 232 1.686 - - - - - 0.779 0.907 - - nuclear cap binding protein subunit 2 [Source:ZFIN;Acc:ZDB-GENE-020419-31]
15. plekhf1 ENSDARG00000102435, ENSDARG00000110694 314 1.683 0.777 - - - - - 0.906 - - pleckstrin homology domain containing, family F (with FYVE domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1289]
16. ctgfb ENSDARG00000104292 69 1.681 - - - - - 0.745 0.936 - - connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
17. spint1b ENSDARG00000012467 97 1.67 - - - - - - 0.919 - 0.751 serine peptidase inhibitor, Kunitz type 1 b [Source:ZFIN;Acc:ZDB-GENE-071218-1]
18. rangap1b ENSDARG00000056059, ENSDARG00000115814 1109 1.649 - - - - - - 0.809 - 0.840 Ran GTPase activating protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1921]
19. fbxo44 ENSDARG00000022623, ENSDARG00000114432 406 1.644 0.760 - - - - - 0.884 - - F-box protein 44 [Source:ZFIN;Acc:ZDB-GENE-041212-85]
20. mamdc2a ENSDARG00000098345 21 1.643 - 0.781 - - - - - - 0.862 MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
21. bcl2l10 ENSDARG00000026766 1426 1.637 - - - - - 0.732 0.905 - - BCL2 like 10 [Source:ZFIN;Acc:ZDB-GENE-030825-2]
22. acot13 ENSDARG00000061728, ENSDARG00000114746 516 1.629 - - - - - - 0.898 - 0.731 acyl-CoA thioesterase 13 [Source:ZFIN;Acc:ZDB-GENE-060503-437]
23. cyp26c1 ENSDARG00000056029 1426 1.623 - - 0.709 - - - 0.914 - - cytochrome P450, family 26, subfamily C, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050714-2]
24. nmnat1 ENSDARG00000105748 102 1.612 0.727 - - - - - - - 0.885 nicotinamide nucleotide adenylyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-101]
25. limk1a ENSDARG00000103467 97 1.606 - 0.708 - - - - 0.898 - - LIM domain kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061212-3]
26. ftr56 ENSDARG00000030954 23 1.599 0.818 0.781 - - - - - - - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
27. rcor3 ENSDARG00000004502 680 1.597 0.740 - - - - - 0.857 - - REST corepressor 3 [Source:ZFIN;Acc:ZDB-GENE-050208-371]
28. gemin2 ENSDARG00000015638 886 1.592 - - - - - - 0.775 - 0.817 gem (nuclear organelle) associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3756]
29. chtf18 ENSDARG00000058480, ENSDARG00000111334 506 1.586 0.740 - - - - - 0.846 - - CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-508]
30. tysnd1 ENSDARG00000074895 85 1.581 - - - - - 0.717 - - 0.864 trypsin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8525]
31. tmub1 ENSDARG00000038787 1012 1.571 0.791 - - - - - 0.780 - - transmembrane and ubiquitin-like domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2504]
32. atp7a ENSDARG00000003699 476 1.564 - - - - - - 0.704 - 0.860 ATPase copper transporting alpha [Source:ZFIN;Acc:ZDB-GENE-060825-45]
33. si:dkey-177p2.18 ENSDARG00000091633 91 1.563 - - - - - 0.714 0.849 - - si:dkey-177p2.18 [Source:ZFIN;Acc:ZDB-GENE-130603-12]
34. SUSD4 ENSDARG00000026335 195 1.559 - 0.781 - - - - - - 0.778 sushi domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-110511-1]
35. psmd4b ENSDARG00000023279 2002 1.546 - - - - - - 0.826 - 0.720 proteasome 26S subunit, non-ATPase 4b [Source:ZFIN;Acc:ZDB-GENE-050417-96]
36. mutyh 512 1.527 - - - - - - 0.731 - 0.796 mutY DNA glycosylase
37. ccdc59 ENSDARG00000045755 297 1.515 - - - - - 0.702 - - 0.813 coiled-coil domain containing 59 [Source:ZFIN;Acc:ZDB-GENE-041210-91]
38. bmp2a ENSDARG00000013409 303 1.492 0.715 - - - - - 0.777 - - bone morphogenetic protein 2a [Source:ZFIN;Acc:ZDB-GENE-980526-388]
39. PGBD4_2 PGBD4_2 184 1.485 - - - - - 0.702 - - 0.783
40. rad1 ENSDARG00000040559 750 1.481 - - - - - 0.700 - - 0.781 RAD1 homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-040426-1873]
41. tank ENSDARG00000067723 225 1.48 0.732 - - - - - - - 0.748 TRAF family member-associated NFKB activator [Source:ZFIN;Acc:ZDB-GENE-060929-308]
42. FAM196A 82 1.474 0.763 - 0.711 - - - - - - family with sequence similarity 196 member A
43. vangl2 ENSDARG00000027397 2418 1.444 - - - - - - 0.724 - 0.720 VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
44. otop2 ENSDARG00000006522 61 1 - 1.000 - - - - - - - otopetrin 2 [Source:ZFIN;Acc:ZDB-GENE-050104-2]
45. lmod2b ENSDARG00000045864 63 1 - 1.000 - - - - - - - leiomodin 2 (cardiac) b [Source:ZFIN;Acc:ZDB-GENE-041210-356]
46. si:dkey-176f19.6 si:dkey-176f19.6 373 0.972 - - - - - - 0.972 - -
47. agtrap ENSDARG00000077082, ENSDARG00000114680 329 0.968 - - - - - - 0.968 - - angiotensin II receptor-associated protein [Source:ZFIN;Acc:ZDB-GENE-050309-11]
48. si:dkey-161j23.7 ENSDARG00000092882 180 0.965 - - - - - - 0.965 - - si:dkey-161j23.7 [Source:ZFIN;Acc:ZDB-GENE-091204-391]
49. CABZ01072534.1 CABZ01072534.1 69 0.963 - - - - - - 0.963 - -
50. si:dkey-4c15.16 ENSDARG00000097261 154 0.962 - - - - - - 0.962 - - si:dkey-4c15.16 [Source:ZFIN;Acc:ZDB-GENE-050420-215]
51. POLDIP3 ENSDARG00000099375 832 0.962 - - - - - - 0.962 - - polymerase (DNA-directed), delta interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-120201-2]
52. HEATR6 ENSDARG00000073686 241 0.96 - - - - - - 0.960 - - HEAT repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-080204-118]
53. IFI30 ENSDARG00000056378, ENSDARG00000112359 73 0.956 - - - - - - 0.956 - - interferon, gamma-inducible protein 30 [Source:ZFIN;Acc:ZDB-GENE-030131-8447]
54. efcab4a efcab4a 110 0.955 - - - - - - 0.955 - -
55. esrrga ENSDARG00000004861 805 0.955 - - - - - - 0.955 - - estrogen-related receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-030821-2]
56. BX088711.1 BX088711.1 125 0.953 - - - - - - 0.953 - -
57. si:dkeyp-86h10.3 ENSDARG00000095615 253 0.952 - - - - - - 0.952 - - si:dkeyp-86h10.3 [Source:ZFIN;Acc:ZDB-GENE-100922-65]
58. fastkd1 ENSDARG00000056128 141 0.951 - - - - - - 0.951 - - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
59. ndor1 ENSDARG00000007429 113 0.95 0.950 - - - - - - - - NADPH dependent diflavin oxidoreductase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1555]
60. grhl3 ENSDARG00000078552 897 0.949 - - - - - - 0.949 - - grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]
61. si:dkeyp-75b4.10 ENSDARG00000079043 7 0.949 - - - - - - - - 0.949 si:dkeyp-75b4.10 [Source:ZFIN;Acc:ZDB-GENE-090313-394]
62. si:ch211-79g12.2 si:ch211-79g12.2 7 0.949 - - - - - - - - 0.949
63. C18H15orf26 C18H15orf26 36 0.949 - - - - - - - - 0.949
64. ASTL ASTL 24 0.949 - - - - - - - - 0.949
65. spsb3a ENSDARG00000077737 527 0.949 - - - - - - 0.949 - - splA/ryanodine receptor domain and SOCS box containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-4182]
66. si:dkey-203a12.2 ENSDARG00000102271 7 0.949 - - - - - - - - 0.949 si:dkey-203a12.2 [Source:ZFIN;Acc:ZDB-GENE-091118-100]
67. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 0.949 - - - - - - - - 0.949 si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
68. cenpi ENSDARG00000052565 482 0.949 - - - - - - 0.949 - - centromere protein I [Source:ZFIN;Acc:ZDB-GENE-060810-127]
69. NUGGC_3 NUGGC_3 10 0.949 - - - - - - - - 0.949
70. si:rp71-3c13.3 si:rp71-3c13.3 128 0.949 - - - - - - 0.949 - -
71. gltpd1 gltpd1 377 0.948 - - - - - - 0.948 - -
72. fam193b ENSDARG00000102831 442 0.948 - - - - - - 0.948 - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
73. tmprss13a ENSDARG00000100969 84 0.948 - - - - - - 0.948 - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
74. dhrs13l1 ENSDARG00000098746 102 0.948 - - - - - - 0.948 - - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
75. si:ch73-68b22.2 ENSDARG00000094609 18 0.947 - - - - - - - - 0.947 si:ch73-68b22.2 [Source:ZFIN;Acc:ZDB-GENE-091204-355]
76. zgc:158463 ENSDARG00000089382 12172 0.947 - - - - - - 0.947 - - zgc:158463 [Source:ZFIN;Acc:ZDB-GENE-070410-9]
77. si:ch211-219f7.3 si:ch211-219f7.3 48 0.947 - - - - - - 0.947 - -
78. ccrl1a ccrl1a 40 0.946 - - - - - - 0.946 - -
79. ogfrl2 ENSDARG00000024815, ENSDARG00000111132 74 0.946 - - - - - - 0.946 - - opioid growth factor receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-030616-523]
80. fam5b fam5b 45 0.946 - - - - - - 0.946 - -
81. ccdc103 ENSDARG00000053455 81 0.945 - - - - - - - - 0.945 coiled-coil domain containing 103 [Source:ZFIN;Acc:ZDB-GENE-040718-253]
82. SUOX ENSDARG00000091574 122 0.945 - - - - - - 0.945 - - sulfite oxidase [Source:ZFIN;Acc:ZDB-GENE-070718-3]
83. nudt17 ENSDARG00000008014 479 0.944 - - - - - - 0.944 - - nudix (nucleoside diphosphate linked moiety X)-type motif 17 [Source:ZFIN;Acc:ZDB-GENE-050913-50]
84. uspl1 ENSDARG00000034825, ENSDARG00000109866 457 0.944 - - - - - - 0.944 - - ubiquitin specific peptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-040930-7]
85. si:ch211-113a14.12 ENSDARG00000077456 1004 0.943 - - - - - - 0.943 - - si:ch211-113a14.12 [Source:ZFIN;Acc:ZDB-GENE-121214-99]
86. sp5l ENSDARG00000115868 361 0.942 - - - - - - - - 0.942 Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
87. si:dkey-240h12.4 ENSDARG00000034210 114 0.942 - - - - - - 0.942 - - si:dkey-240h12.4 [Source:ZFIN;Acc:ZDB-GENE-070705-406]
88. smcr8a ENSDARG00000052818 559 0.942 - - - - - - 0.942 - - Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
89. GANAB_2 GANAB_2 3210 0.942 - - - - - - 0.942 - -
90. gsk3aa ENSDARG00000029501 957 0.941 - - - - - - 0.941 - - glycogen synthase kinase 3 alpha a [Source:ZFIN;Acc:ZDB-GENE-060503-796]
91. TRHDE_1 TRHDE_1 102 0.941 - - - - - - 0.941 - -
92. serpine3 ENSDARG00000057108 49 0.941 - - - - - - - - 0.941 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
93. si:ch211-259i2.2 si:ch211-259i2.2 45 0.941 - - - - - - 0.941 - -
94. fpgt ENSDARG00000042139 155 0.94 - - - - - - 0.940 - - fucose-1-phosphate guanylyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-489]
95. si:ch211-117l17.4 ENSDARG00000103534 24 0.94 - - - - - - 0.940 - - si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
96. pane1 ENSDARG00000024681 866 0.94 0.940 - - - - - - - - proliferation associated nuclear element [Source:ZFIN;Acc:ZDB-GENE-040611-4]
97. si:ch211-174j14.2 ENSDARG00000093015 111 0.94 - - - - - - 0.940 - - si:ch211-174j14.2 [Source:ZFIN;Acc:ZDB-GENE-050419-63]
98. otx2 766 0.939 - - - - - - 0.939 - - orthodenticle homeobox 2, transcript variant X2
99. ube2b ENSDARG00000026035 51 0.939 - 0.939 - - - - - - - ubiquitin-conjugating enzyme E2B (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-040718-247]
100. MYOCD 46 0.938 - 0.938 - - - - - - - myocardin, transcript variant X2

There are 1345 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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