Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tcf25

Gene Name Gene ID Reads Annotation
tcf25 ENSDARG00000040861 1506 transcription factor 25 (basic helix-loop-helix) [Source:ZFIN;Acc:ZDB-GENE-040905-2]










Genes with expression patterns similar to tcf25

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tcf25 ENSDARG00000040861 1506 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transcription factor 25 (basic helix-loop-helix) [Source:ZFIN;Acc:ZDB-GENE-040905-2]
2. slc35b1 ENSDARG00000038213 465 1.649 0.808 - - - - - 0.841 - - solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
3. LRP10 ENSDARG00000054539 1895 1.622 - 0.789 - - - - 0.833 - - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
4. b3gnt3.1 ENSDARG00000043482 1991 1.575 - - - - - - 0.766 0.809 - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040625-129]
5. ppapdc1b ppapdc1b 2866 1.566 - 0.749 - - - - 0.817 - -
6. fam102ba ENSDARG00000053104 845 1.561 0.721 - - - - - 0.840 - - family with sequence similarity 102, member B, a [Source:ZFIN;Acc:ZDB-GENE-060616-312]
7. SLC6A13 ENSDARG00000067567 1617 1.555 - 0.713 - - - - 0.842 - - solute carrier family 6 member 13 [Source:HGNC Symbol;Acc:HGNC:11046]
8. rnf168 ENSDARG00000112483 594 1.542 - - - - - 0.707 0.835 - - ring finger protein 168 [Source:ZFIN;Acc:ZDB-GENE-030131-6013]
9. dhrs9 ENSDARG00000019260 250 1.538 0.765 - - - - - - 0.773 - dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
10. ccdc22 ENSDARG00000052379 2276 1.535 - 0.700 - - - - 0.835 - - coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]
11. styk1 1199 1.529 - - - - - - 0.804 0.725 - serine/threonine/tyrosine kinase 1
12. stx11b.1 ENSDARG00000029290, ENSDARG00000109872 2113 1.518 - 0.702 - - - - 0.816 - - syntaxin 11b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1893]
13. pigp ENSDARG00000038805 611 1.516 0.770 - - - - - - 0.746 - phosphatidylinositol glycan anchor biosynthesis, class P [Source:ZFIN;Acc:ZDB-GENE-030131-4041]
14. stk38a ENSDARG00000019973 1343 1.5 - 0.741 - - - - - 0.759 - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
15. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 1.5 0.729 0.771 - - - - - - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
16. SAMD4A ENSDARG00000075759 3282 1.499 - 0.724 - - - 0.775 - - - sterile alpha motif domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-070720-7]
17. spsb4b ENSDARG00000040538 372 1.493 - 0.705 - - - - - 0.788 - splA/ryanodine receptor domain and SOCS box containing 4b [Source:ZFIN;Acc:ZDB-GENE-040801-213]
18. huwe1 ENSDARG00000016782 6493 1.488 - 0.723 - - - 0.765 - - - HECT, UBA and WWE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-387]
19. calrl calrl 16799 1.487 - - - - - 0.708 - 0.779 -
20. adhfe1 ENSDARG00000053518 499 1.475 0.701 - - - - - - 0.774 - alcohol dehydrogenase, iron containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2070]
21. PEG3_4 PEG3_4 256 1.451 0.713 - - - - 0.738 - - -
22. bsnd ENSDARG00000086265 178 0.995 - - - - - - 0.995 - - barttin CLCNK-type chloride channel accessory beta subunit [Source:ZFIN;Acc:ZDB-GENE-070705-548]
23. C22H6orf89 C22H6orf89 1076 0.994 - - - - - - 0.994 - -
24. pomt1 ENSDARG00000067670, ENSDARG00000112005 588 0.994 - - - - - - 0.994 - - protein-O-mannosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-966]
25. ccnb1 ENSDARG00000051923 3226 0.986 - - - - - - 0.986 - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
26. COL7A1 ENSDARG00000021720 2210 0.984 - - - - - - 0.984 - - collagen, type VII, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2427]
27. wdr5 ENSDARG00000016903 4834 0.983 - - - - - - 0.983 - - WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
28. pcbp2 ENSDARG00000099039 4248 0.976 - - - - - - 0.976 - - poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
29. rpa1 ENSDARG00000003938 4403 0.973 - - - - - - 0.973 - - replication protein A1 [Source:ZFIN;Acc:ZDB-GENE-030912-3]
30. dbnla ENSDARG00000008170 2129 0.97 - - - - - - 0.970 - - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
31. parvaa ENSDARG00000043710 3495 0.967 - - - - - - 0.967 - - parvin, alpha a [Source:ZFIN;Acc:ZDB-GENE-040721-2]
32. SRGAP3 ENSDARG00000060309 5353 0.963 - - - - - - 0.963 - - SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
33. ccz1 ENSDARG00000056559, ENSDARG00000109877 2629 0.956 - - - - - - 0.956 - - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:ZFIN;Acc:ZDB-GENE-040426-698]
34. MAP4K4 ENSDARG00000098670 4665 0.955 - - - - - - 0.955 - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
35. C2CD2 ENSDARG00000105000 2573 0.948 - - - - - - 0.948 - - C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
36. pfdn1 ENSDARG00000014536 6969 0.936 - - - - - - 0.936 - - prefoldin subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050306-50]
37. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 0.933 - - - - - - 0.933 - - glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
38. acsl3a ENSDARG00000032079 897 0.921 - - - - - - 0.921 - - acyl-CoA synthetase long chain family member 3a [Source:ZFIN;Acc:ZDB-GENE-050420-181]
39. fbxw8 ENSDARG00000079089 571 0.92 - - - - - - - 0.920 - F-box and WD repeat domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-080204-111]
40. mmd ENSDARG00000040387 4522 0.918 - - - - - - 0.918 - - monocyte to macrophage differentiation-associated [Source:ZFIN;Acc:ZDB-GENE-051120-39]
41. psma8 ENSDARG00000010965 8321 0.911 - - - - - - 0.911 - - proteasome subunit alpha 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2194]
42. ube2e3 ENSDARG00000012244 8909 0.909 - - - - - - 0.909 - - ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-408]
43. gapdhs ENSDARG00000039914 8760 0.909 - - - - - - 0.909 - - glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
44. ppp5c ENSDARG00000034313 8794 0.908 - - - - - - 0.908 - - protein phosphatase 5, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050327-75]
45. evpla ENSDARG00000019808 7565 0.902 - 0.902 - - - - - - - envoplakin a [Source:ZFIN;Acc:ZDB-GENE-030829-19]
46. nono ENSDARG00000020482, ENSDARG00000115783 12482 0.901 - - - - - - 0.901 - - non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
47. wasb ENSDARG00000026350 139 0.897 - - - - - - - 0.897 - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
48. gas1a ENSDARG00000077298 10891 0.893 - - - - - - 0.893 - - growth arrest-specific 1a [Source:ZFIN;Acc:ZDB-GENE-050302-155]
49. eif4a3 ENSDARG00000102978 16162 0.891 - - - - - - 0.891 - - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
50. gsto2 ENSDARG00000033285 583 0.89 - - - - - - - 0.890 - glutathione S-transferase omega 2 [Source:ZFIN;Acc:ZDB-GENE-041114-67]
51. ecm2 ENSDARG00000071549 1527 0.885 - - - - - - 0.885 - - extracellular matrix protein 2, female organ and adipocyte specific [Source:ZFIN;Acc:ZDB-GENE-050208-651]
52. cdc42ep1b ENSDARG00000077792 1569 0.876 - 0.876 - - - - - - - CDC42 effector protein (Rho GTPase binding) 1b [Source:ZFIN;Acc:ZDB-GENE-120215-219]
53. tceb2 10382 0.871 - - - - - - 0.871 - - transcription elongation factor B (SIII), polypeptide 2
54. galcb ENSDARG00000016474 615 0.871 - - - - - - - 0.871 - galactosylceramidase b [Source:ZFIN;Acc:ZDB-GENE-040426-2115]
55. fmo5 ENSDARG00000016357, ENSDARG00000116737 2267 0.87 - 0.870 - - - - - - - flavin containing monooxygenase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6606]
56. col16a1 ENSDARG00000009194 5600 0.861 - - - - - - 0.861 - - collagen, type XVI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-351]
57. fth1a ENSDARG00000015551 48001 0.855 - - - - - - 0.855 - - ferritin, heavy polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-000831-2]
58. gmds ENSDARG00000026629 3976 0.853 - - - - - - 0.853 - - GDP-mannose 4,6-dehydratase [Source:ZFIN;Acc:ZDB-GENE-050419-45]
59. creg1 ENSDARG00000105154 843 0.85 0.850 - - - - - - - - cellular repressor of E1A-stimulated genes 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2042]
60. bag1 ENSDARG00000020895 1660 0.846 - 0.846 - - - - - - - BCL2 associated athanogene 1 [Source:ZFIN;Acc:ZDB-GENE-050309-89]
61. foxp4 ENSDARG00000076120 9458 0.845 - - - - - - 0.845 - - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
62. ZACN ZACN 502 0.845 - - - - - - - 0.845 -
63. galnt7 ENSDARG00000057303 2017 0.843 - 0.843 - - - - - - - UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-284]
64. AL954146.1 ENSDARG00000038891 114 0.842 - - - - - - 0.842 - - trypsin I-P1-like [Source:NCBI gene;Acc:560023]
65. itsn2a ENSDARG00000000161 115 0.842 - - - - - - 0.842 - - intersectin 2a [Source:ZFIN;Acc:ZDB-GENE-041014-84]
66. cryba1b ENSDARG00000053875 3256 0.842 - - - - - - 0.842 - - crystallin, beta A1b [Source:ZFIN;Acc:ZDB-GENE-040718-326]
67. mpeg1 mpeg1 123 0.842 - - - - - - 0.842 - -
68. ipmkb ENSDARG00000029291 625 0.842 - - - - - - 0.842 - - inositol polyphosphate multikinase b [Source:ZFIN;Acc:ZDB-GENE-061215-5]
69. rtdr1 rtdr1 158 0.842 - - - - - - 0.842 - -
70. slc25a44a ENSDARG00000045927 1067 0.842 - - - - - - - 0.842 - solute carrier family 25, member 44 a [Source:ZFIN;Acc:ZDB-GENE-041114-38]
71. ENSDARG00000078787 ENSDARG00000078787 97 0.842 - - - - - - 0.842 - -
72. mapk15 ENSDARG00000100822 157 0.841 - - - - - - 0.841 - - mitogen-activated protein kinase 15 [Source:ZFIN;Acc:ZDB-GENE-050522-307]
73. magixa ENSDARG00000025108 561 0.841 - - - - - - 0.841 - - MAGI family member, X-linked a [Source:ZFIN;Acc:ZDB-GENE-060503-115]
74. CABZ01078431.1 CABZ01078431.1 183 0.841 - - - - - - 0.841 - -
75. acad11 ENSDARG00000045411 350 0.841 - - - - - - 0.841 - - acyl-CoA dehydrogenase family, member 11 [Source:ZFIN;Acc:ZDB-GENE-040426-814]
76. fbxo21 ENSDARG00000076611 466 0.841 0.841 - - - - - - - - F-box protein 21 [Source:ZFIN;Acc:ZDB-GENE-100922-229]
77. ankrd6b ENSDARG00000029370 429 0.841 - - - - - - 0.841 - - ankyrin repeat domain 6b [Source:ZFIN;Acc:ZDB-GENE-030916-4]
78. ncoa6 ENSDARG00000071272 759 0.841 - - - - - - 0.841 - - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
79. CU019646.2 CU019646.2 519 0.841 - - - - - - 0.841 - -
80. znf451 ENSDARG00000076939 508 0.841 - - - - - - 0.841 - - zinc finger protein 451 [Source:ZFIN;Acc:ZDB-GENE-081107-14]
81. TPGS1 TPGS1 228 0.841 - - - - - - 0.841 - -
82. rrp7a ENSDARG00000098934 1123 0.841 - - - - - - 0.841 - - ribosomal RNA processing 7 homolog A [Source:ZFIN;Acc:ZDB-GENE-050417-38]
83. apc ENSDARG00000058868 2605 0.841 0.841 - - - - - - - - adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
84. tmem198b ENSDARG00000034685, ENSDARG00000111728 639 0.84 - - - - - - 0.840 - - transmembrane protein 198b [Source:ZFIN;Acc:ZDB-GENE-050809-123]
85. nlk1 ENSDARG00000006566 1123 0.84 - - - - - - 0.840 - - nemo-like kinase, type 1 [Source:ZFIN;Acc:ZDB-GENE-040701-1]
86. PDE3B ENSDARG00000062190 372 0.84 - - - - - - 0.840 - - phosphodiesterase 3B [Source:HGNC Symbol;Acc:HGNC:8779]
87. lsm12a ENSDARG00000028848, ENSDARG00000115800 3499 0.84 - - - - - - 0.840 - - LSM12 homolog a [Source:ZFIN;Acc:ZDB-GENE-040516-12]
88. SLC24A2 ENSDARG00000042988 242 0.84 - - - - - - 0.840 - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-277]
89. tmem104 ENSDARG00000088560 859 0.84 - - - - - - 0.840 - - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]
90. gnpat ENSDARG00000074401 479 0.84 - - - - - - 0.840 - - glyceronephosphate O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-040618-4]
91. RAB38 122 0.84 - - - - - - 0.840 - - RAB38, member RAS oncogene family
92. IGSF8 ENSDARG00000038467 2102 0.839 - - - - - - 0.839 - - immunoglobulin superfamily, member 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2444]
93. crb3b ENSDARG00000068182 683 0.839 - - - - - - 0.839 - - crumbs homolog 3b [Source:ZFIN;Acc:ZDB-GENE-060610-3]
94. NBR1 NBR1 752 0.839 - - - - - - 0.839 - -
95. ptk6a ENSDARG00000017947 682 0.838 - - - - - - 0.838 - - PTK6 protein tyrosine kinase 6a [Source:ZFIN;Acc:ZDB-GENE-081105-117]
96. CABZ01115256.1 CABZ01115256.1 683 0.838 - - - - - - 0.838 - -
97. cap1 ENSDARG00000016350 891 0.838 - - - - - - 0.838 - - CAP, adenylate cyclase-associated protein 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6459]
98. thbs4a ENSDARG00000102777 625 0.838 - - - - - - 0.838 - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
99. trim25 ENSDARG00000104396, ENSDARG00000110468, ENSDARG00000117057 262 0.838 - - - - - - 0.838 - - tripartite motif containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-797]
100. trappc3 ENSDARG00000045364 1021 0.838 - - - - - - 0.838 - - trafficking protein particle complex 3 [Source:ZFIN;Acc:ZDB-GENE-040801-120]

There are 932 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA