Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tceb1a

Gene Name Gene ID Reads Annotation
tceb1a 969 transcription elongation factor B (SIII), polypeptide 1a, transcript variant X4










Genes with expression patterns similar to tceb1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tceb1a 969 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transcription elongation factor B (SIII), polypeptide 1a, transcript variant X4
2. huwe1 ENSDARG00000016782 6493 2.313 0.742 - - - - 0.707 - 0.864 - HECT, UBA and WWE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-387]
3. lrrc24 ENSDARG00000101704 224 1.917 0.923 - - - - - - 0.994 - leucine rich repeat containing 24 [Source:ZFIN;Acc:ZDB-GENE-060503-496]
4. fzd7b ENSDARG00000027589 2562 1.85 0.963 - - - - - - 0.887 - frizzled class receptor 7b [Source:ZFIN;Acc:ZDB-GENE-990415-229]
5. vrk1 ENSDARG00000018006 1759 1.85 0.926 - - - - - - 0.924 - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
6. pigq ENSDARG00000038097 486 1.844 0.932 0.912 - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class Q [Source:ZFIN;Acc:ZDB-GENE-030131-9793]
7. pmpca ENSDARG00000102607 1024 1.834 - - - 0.843 - - - 0.991 - peptidase (mitochondrial processing) alpha [Source:ZFIN;Acc:ZDB-GENE-030131-5809]
8. OCRL ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 317 1.81 - - - 0.816 - - - 0.994 - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
9. srsf9 ENSDARG00000008097 2405 1.81 0.884 - - - - - - 0.926 - serine/arginine-rich splicing factor 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2397]
10. zgc:174906 ENSDARG00000075314 2187 1.8 0.880 - - - - - - 0.920 - zgc:174906 [Source:ZFIN;Acc:ZDB-GENE-030131-6125]
11. ppfibp2a ENSDARG00000061977 199 1.783 0.954 - - 0.829 - - - - - PTPRF interacting protein, binding protein 2a (liprin beta 2) [Source:ZFIN;Acc:ZDB-GENE-070705-277]
12. C17H14orf1 C17H14orf1 256 1.774 0.954 - - 0.820 - - - - -
13. syne1b ENSDARG00000063068 786 1.771 - 0.782 - - - - - 0.989 - spectrin repeat containing, nuclear envelope 1b [Source:ZFIN;Acc:ZDB-GENE-071218-4]
14. TULP3 TULP3 433 1.757 0.945 0.812 - - - - - - -
15. C25H12orf73 C25H12orf73 2031 1.746 0.898 0.848 - - - - - - -
16. RNF5 ENSDARG00000075606 1730 1.741 - 0.758 - - - - - 0.983 - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
17. mast4 1164 1.731 - 0.750 - - - - - 0.981 - microtubule associated serine/threonine kinase family member 4, transcript variant X6
18. DGKI 306 1.728 - 0.736 - - - - - 0.992 - diacylglycerol kinase, iota
19. brwd1 ENSDARG00000074747, ENSDARG00000111353 1008 1.72 - 0.725 - - - - - 0.995 - bromodomain and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041111-120]
20. THEG ENSDARG00000078644 121 1.703 0.938 0.765 - - - - - - - theg spermatid protein [Source:ZFIN;Acc:ZDB-GENE-070912-59]
21. rab23 ENSDARG00000004151 1077 1.701 - 0.717 - - - - - 0.984 - RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]
22. rbm4.1 ENSDARG00000036386 625 1.698 - 0.708 - - - - - 0.990 - RNA binding motif protein 4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3902]
23. rspry1 ENSDARG00000062558 1424 1.694 0.950 0.744 - - - - - - - ring finger and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061026-2]
24. mafba ENSDARG00000017121 1215 1.693 0.919 0.774 - - - - - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Ba [Source:ZFIN;Acc:ZDB-GENE-980526-515]
25. rab5c ENSDARG00000026712 4733 1.687 0.812 - - - - - - 0.875 - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
26. MYH9 MYH9 158 1.68 0.945 0.735 - - - - - - -
27. cyb5r1 ENSDARG00000018966, ENSDARG00000112062 1017 1.68 0.945 0.735 - - - - - - - cytochrome b5 reductase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8497]
28. exd3 ENSDARG00000063140 119 1.678 0.952 - - - - - 0.726 - - exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
29. actl6a ENSDARG00000070828, ENSDARG00000115348 1961 1.673 - 0.789 - - - - - 0.884 - actin-like 6A [Source:ZFIN;Acc:ZDB-GENE-020419-36]
30. SIRT5 ENSDARG00000039684 1124 1.67 0.917 - - 0.753 - - - - - sirtuin 5 [Source:ZFIN;Acc:ZDB-GENE-040718-349]
31. lmo4a ENSDARG00000013853, ENSDARG00000111873, ENSDARG00000113473 2584 1.667 0.819 - - - - - - 0.848 - LIM domain only 4a [Source:ZFIN;Acc:ZDB-GENE-010702-1]
32. larp6 1695 1.663 0.895 - - 0.768 - - - - - La ribonucleoprotein domain family, member 6
33. pknox1.2 ENSDARG00000036542 1503 1.661 0.931 - - - - - 0.730 - - pbx/knotted 1 homeobox 1.2 [Source:ZFIN;Acc:ZDB-GENE-020123-1]
34. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 1.66 0.891 0.769 - - - - - - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
35. kcnj1a.5 ENSDARG00000089060 617 1.659 0.898 - - 0.761 - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-050420-120]
36. acot11b ENSDARG00000042122 235 1.659 0.941 0.718 - - - - - - - acyl-CoA thioesterase 11b [Source:ZFIN;Acc:ZDB-GENE-051127-37]
37. CABZ01020207.1 CABZ01020207.1 145 1.658 0.957 0.701 - - - - - - -
38. tbcc ENSDARG00000022918 386 1.643 - - - - - - 0.708 0.935 - tubulin folding cofactor C [Source:ZFIN;Acc:ZDB-GENE-041008-103]
39. C21HXorf40A C21HXorf40A 216 1.631 - 0.797 - 0.834 - - - - -
40. cmah ENSDARG00000057714 852 1.629 0.922 0.707 - - - - - - - cytidine monophospho-N-acetylneuraminic acid hydroxylase [Source:ZFIN;Acc:ZDB-GENE-040704-33]
41. shc1 ENSDARG00000075437 3278 1.622 0.707 - - - - - - 0.915 - SHC (Src homology 2 domain containing) transforming protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2538]
42. rnf13 ENSDARG00000019438 1560 1.608 0.807 0.801 - - - - - - - ring finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-040426-772]
43. BX897726.3 BX897726.3 220 1.608 - 0.781 - 0.827 - - - - -
44. vkorc1 ENSDARG00000086183 1212 1.601 0.842 - - - - - 0.759 - - vitamin K epoxide reductase complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2286]
45. NBEAL1 ENSDARG00000099547 1112 1.593 0.863 0.730 - - - - - - - neurobeachin-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-544]
46. tspan9a ENSDARG00000025299 676 1.585 0.821 0.764 - - - - - - - tetraspanin 9a [Source:ZFIN;Acc:ZDB-GENE-060503-632]
47. ago3b ENSDARG00000063079 1441 1.579 0.747 - - - - - 0.832 - - argonaute RISC catalytic component 3b [Source:ZFIN;Acc:ZDB-GENE-060503-452]
48. rreb1b ENSDARG00000042652 2731 1.566 - 0.855 - - - 0.711 - - - ras responsive element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-070912-273]
49. si:rp71-61h23.4 1921 1.563 0.765 - - - - - 0.798 - - si:rp71-61h23.4
50. WDR83OS ENSDARG00000025554 7117 1.545 - - - 0.701 - - - 0.844 - WD repeat domain 83 opposite strand [Source:ZFIN;Acc:ZDB-GENE-040426-1674]
51. zgc:158564 ENSDARG00000052244 954 1.543 0.778 0.765 - - - - - - - zgc:158564 [Source:ZFIN;Acc:ZDB-GENE-070112-1662]
52. bnip3la ENSDARG00000025468 3097 1.538 0.789 - - - - - 0.749 - - BCL2 interacting protein 3 like a [Source:ZFIN;Acc:ZDB-GENE-030131-2283]
53. mkrn4 ENSDARG00000028295 2768 1.52 0.718 - - - - - 0.802 - - makorin, ring finger protein, 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5954]
54. NFX1 NFX1 595 1.515 - 0.805 - - - - 0.710 - -
55. fam160a1 fam160a1 1445 1.502 - 0.746 - 0.756 - - - - -
56. aff3 ENSDARG00000079575 578 1.5 - - - 0.782 - - 0.718 - - AF4/FMR2 family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030219-193]
57. cnih cnih 8292 1.493 - 0.759 - - - - - 0.734 -
58. nob1 ENSDARG00000016080 2483 1.486 0.773 - - - - - 0.713 - - NIN1 (RPN12) binding protein 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3112]
59. micall1 micall1 720 1.486 - 0.782 - - - - 0.704 - -
60. sema3fb ENSDARG00000055373 834 1.479 - 0.746 - - - - 0.733 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb [Source:ZFIN;Acc:ZDB-GENE-050513-2]
61. mcm5 ENSDARG00000019507 6407 1.469 0.729 - - - - - - 0.740 - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
62. rwdd3 ENSDARG00000057315 289 1.452 - 0.748 - 0.704 - - - - - RWD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1723]
63. naif1 ENSDARG00000062753 176 1.442 - 0.707 - - - - 0.735 - - nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
64. pisd ENSDARG00000052462, ENSDARG00000110128 463 1.44 - 0.706 - 0.734 - - - - - phosphatidylserine decarboxylase [Source:ZFIN;Acc:ZDB-GENE-061215-46]
65. casc4 ENSDARG00000074490 2019 1.438 - 0.709 - 0.729 - - - - - cancer susceptibility candidate 4 [Source:ZFIN;Acc:ZDB-GENE-091130-1]
66. esd ENSDARG00000019496 3192 1.435 0.723 0.712 - - - - - - - esterase D/formylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-050417-328]
67. ankrd37 ENSDARG00000056376 131 0.996 - - - - - - - 0.996 - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]
68. kif7 ENSDARG00000033099 971 0.996 - - - - - - - 0.996 - kinesin family member 7 [Source:ZFIN;Acc:ZDB-GENE-050307-1]
69. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 0.995 - - - - - - - 0.995 - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
70. SIPA1 SIPA1 302 0.995 - - - - - - - 0.995 -
71. cetn3 ENSDARG00000011825 1087 0.995 - - - - - - - 0.995 - centrin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-152]
72. ftr15 122 0.995 - - - - - - - 0.995 - finTRIM family, member 15
73. cks2 ENSDARG00000071410, ENSDARG00000116198 966 0.995 - - - - - - - 0.995 - CDC28 protein kinase regulatory subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050208-508]
74. lig4 ENSDARG00000060620 369 0.995 - - - - - - - 0.995 - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
75. C20H1orf198 C20H1orf198 246 0.995 - - - - - - - 0.995 -
76. si:ch211-241n15.2 si:ch211-241n15.2 435 0.995 - - - - - - - 0.995 -
77. ptprz1b ENSDARG00000020871 435 0.995 - - - - - - - 0.995 - protein tyrosine phosphatase, receptor-type, Z polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-050506-100]
78. cbll1 ENSDARG00000015222 995 0.995 - - - - - - - 0.995 - Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-691]
79. sult4a1 ENSDARG00000101967 205 0.995 - - - - - - - 0.995 - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
80. GPR101 ENSDARG00000039218 157 0.995 - - - - - - - 0.995 - G protein-coupled receptor 101 [Source:ZFIN;Acc:ZDB-GENE-070914-1]
81. SYNDIG1 ENSDARG00000100751 165 0.995 - - - - - - - 0.995 - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
82. CABZ01087670.1 CABZ01087670.1 411 0.995 - - - - - - - 0.995 -
83. atn1 ENSDARG00000092067 257 0.995 - - - - - - - 0.995 - atrophin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-426]
84. si:dkey-117p18.2 si:dkey-117p18.2 104 0.995 - - - - - - - 0.995 -
85. mul1b ENSDARG00000052527 431 0.995 - - - - - - - 0.995 - mitochondrial E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-050208-236]
86. l3mbtl1a ENSDARG00000014828 119 0.995 - - - - - - - 0.995 - l(3)mbt-like 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090312-120]
87. map9 ENSDARG00000037276, ENSDARG00000115648 581 0.995 - - - - - - - 0.995 - microtubule-associated protein 9 [Source:ZFIN;Acc:ZDB-GENE-080225-36]
88. slc29a4 ENSDARG00000059690 478 0.995 - - - - - - - 0.995 - solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
89. CASKIN2_1 CASKIN2_1 2299 0.994 - - - - - - - 0.994 -
90. tmem88b ENSDARG00000069388 501 0.994 - - - - - - - 0.994 - transmembrane protein 88 b [Source:ZFIN;Acc:ZDB-GENE-060929-644]
91. krt1-19d ENSDARG00000023082 902 0.994 - - - - - - - 0.994 - keratin, type 1, gene 19d [Source:ZFIN;Acc:ZDB-GENE-060316-1]
92. fbxo11a ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 1129 0.994 - - - - - - - 0.994 - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
93. si:ch211-113p18.3 ENSDARG00000087835 377 0.994 - - - - - - - 0.994 - si:ch211-113p18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4983]
94. zgc:112962 ENSDARG00000069102 431 0.994 - - - - - - - 0.994 - zgc:112962 [Source:ZFIN;Acc:ZDB-GENE-050410-15]
95. prpf31 ENSDARG00000095904 526 0.993 - - - - - - - 0.993 - PRP31 pre-mRNA processing factor 31 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1561]
96. bcl9 ENSDARG00000036687 1124 0.993 - - - - - - - 0.993 - B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
97. abcb6b ENSDARG00000074254 600 0.993 - - - - - - - 0.993 - ATP-binding cassette, sub-family B (MDR/TAP), member 6b [Source:ZFIN;Acc:ZDB-GENE-070912-584]
98. atp6ap2 ENSDARG00000008735 5096 0.993 - - - - - - - 0.993 - ATPase H+ transporting accessory protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1960]
99. itga11a ENSDARG00000036086, ENSDARG00000111495 254 0.993 - - - - - - - 0.993 - integrin, alpha 11a [Source:ZFIN;Acc:ZDB-GENE-050324-1]
100. hsd17b12b ENSDARG00000035872 631 0.993 - - - - - - - 0.993 - hydroxysteroid (17-beta) dehydrogenase 12b [Source:ZFIN;Acc:ZDB-GENE-030131-1346]

There are 1417 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA