Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tcea3

Gene Name Gene ID Reads Annotation
tcea3 ENSDARG00000004724 674 transcription elongation factor A (SII), 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1860]










Genes with expression patterns similar to tcea3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tcea3 ENSDARG00000004724 674 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transcription elongation factor A (SII), 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1860]
2. hfe2 4113 1.697 0.824 0.873 - - - - - - - hemochromatosis type 2
3. CU468924.1 CU468924.1 544 1.69 0.845 0.845 - - - - - - -
4. smyd1b ENSDARG00000091253 4964 1.655 0.851 0.804 - - - - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
5. C13H10orf71 3489 1.616 0.881 0.735 - - - - - - - chromosome 13 C10orf71 homolog
6. arpp21 ENSDARG00000061081 892 1.612 0.772 0.840 - - - - - - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
7. akap6 ENSDARG00000077295 1382 1.611 0.812 0.799 - - - - - - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
8. chchd4 chchd4 785 1.61 0.755 0.855 - - - - - - -
9. hapln1a ENSDARG00000089769 12334 1.6 0.865 0.735 - - - - - - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
10. kcnma1a ENSDARG00000079840 2584 1.595 0.828 0.767 - - - - - - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
11. tnc ENSDARG00000021948, ENSDARG00000113518 12162 1.594 0.837 0.757 - - - - - - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
12. plecb ENSDARG00000021987 13621 1.579 0.810 0.769 - - - - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
13. znf648 ENSDARG00000104823 1918 1.577 0.830 0.747 - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
14. LIMD1_1 LIMD1_1 348 1.575 0.863 - - - - - - 0.712 -
15. bves ENSDARG00000058548 2291 1.568 0.856 - - 0.712 - - - - - blood vessel epicardial substance [Source:ZFIN;Acc:ZDB-GENE-040624-11]
16. fam46c 1913 1.563 0.797 - - - - - 0.766 - - family with sequence similarity 46, member C
17. cap2 ENSDARG00000104478 3266 1.558 0.749 0.809 - - - - - - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
18. sptb ENSDARG00000030490 7128 1.557 0.829 0.728 - - - - - - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
19. cacng1 cacng1 3118 1.554 0.750 0.804 - - - - - - -
20. GRAMD4 GRAMD4 1967 1.551 0.780 - - - - - 0.771 - -
21. alpk2 ENSDARG00000079637 1483 1.551 0.729 0.822 - - - - - - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
22. usp28 ENSDARG00000008880 1850 1.542 0.824 0.718 - - - - - - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
23. BX530018.3 ENSDARG00000107022 614 1.539 0.807 0.732 - - - - - - -
24. zcchc24 ENSDARG00000078026 1619 1.537 0.758 0.779 - - - - - - - zinc finger, CCHC domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-030131-3573]
25. BX294434.1 ENSDARG00000061272 6493 1.534 0.789 0.745 - - - - - - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
26. tmem41ab ENSDARG00000026771, ENSDARG00000114061, ENSDARG00000116237 641 1.533 0.773 0.760 - - - - - - - transmembrane protein 41ab [Source:ZFIN;Acc:ZDB-GENE-040426-2050]
27. si:dkey-258f14.2 ENSDARG00000094874 297 1.531 - 0.755 - - - - 0.776 - - si:dkey-258f14.2 [Source:ZFIN;Acc:ZDB-GENE-081104-395]
28. srl ENSDARG00000104587 11126 1.528 0.796 0.732 - - - - - - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
29. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.527 0.774 0.753 - - - - - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
30. AL954696.1 ENSDARG00000078442 768 1.527 - 0.813 - - - 0.714 - - - NOP9 nucleolar protein [Source:NCBI gene;Acc:100332577]
31. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 1.524 0.771 0.753 - - - - - - - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
32. ctdspl2b ENSDARG00000060586 1682 1.521 0.705 - - - - - 0.816 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-1809]
33. FHOD3_1 FHOD3_1 983 1.518 0.792 0.726 - - - - - - -
34. nhsa ENSDARG00000070227 686 1.509 - 0.766 - - - 0.743 - - - Nance-Horan syndrome a (congenital cataracts and dental anomalies) [Source:ZFIN;Acc:ZDB-GENE-090617-1]
35. MSS51 ENSDARG00000075463 428 1.506 0.702 0.804 - - - - - - - MSS51 mitochondrial translational activator [Source:ZFIN;Acc:ZDB-GENE-130530-775]
36. mcamb ENSDARG00000005368 1660 1.502 0.701 0.801 - - - - - - - melanoma cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030219-213]
37. MYOT ENSDARG00000076312 1791 1.501 0.733 0.768 - - - - - - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
38. ndufs1 ENSDARG00000028546 5795 1.498 0.794 - - - - - 0.704 - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:ZFIN;Acc:ZDB-GENE-030131-478]
39. slc8a3 ENSDARG00000004931 338 1.498 0.771 0.727 - - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-050810-1]
40. arvcfb ENSDARG00000061688 2388 1.498 0.733 0.765 - - - - - - - ARVCF, delta catenin family member b [Source:ZFIN;Acc:ZDB-GENE-060526-60]
41. ITGB1BP2 ENSDARG00000030176 2472 1.496 0.735 0.761 - - - - - - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
42. tns1 tns1 5891 1.493 0.749 0.744 - - - - - - -
43. CABZ01113191.1 CABZ01113191.1 388 1.491 0.756 - - - - - 0.735 - -
44. chrna1 ENSDARG00000009021 2931 1.491 0.715 0.776 - - - - - - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
45. pbxip1a ENSDARG00000071015 4960 1.488 0.745 0.743 - - - - - - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
46. proza ENSDARG00000037783, ENSDARG00000116864 500 1.483 - 0.705 - - - 0.778 - - - protein Z, vitamin K-dependent plasma glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-061013-403]
47. ryr3 ENSDARG00000071331 6795 1.482 0.749 0.733 - - - - - - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
48. fitm1 ENSDARG00000056464 1759 1.481 0.761 0.720 - - - - - - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
49. MYOM3 2720 1.48 0.769 0.711 - - - - - - - myomesin 3, transcript variant X2
50. timm13 ENSDARG00000058297 4447 1.478 - 0.724 - - - 0.754 - - - translocase of inner mitochondrial membrane 13 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-167]
51. mrto4 ENSDARG00000007130 1086 1.477 0.751 0.726 - - - - - - - MRT4 homolog, ribosome maturation factor [Source:ZFIN;Acc:ZDB-GENE-050417-142]
52. dtnba ENSDARG00000077694 5483 1.475 0.771 0.704 - - - - - - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
53. rai14 ENSDARG00000039974, ENSDARG00000111103 916 1.473 0.754 0.719 - - - - - - - retinoic acid induced 14 [Source:ZFIN;Acc:ZDB-GENE-040718-235]
54. mov10b.1 ENSDARG00000061177 370 1.473 - - - - - 0.730 0.743 - - Moloney leukemia virus 10b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9089]
55. plod2 ENSDARG00000011821 1656 1.471 0.738 0.733 - - - - - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
56. klhl41a ENSDARG00000068888 1034 1.469 0.763 0.706 - - - - - - - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
57. DNAJA4 ENSDARG00000051762 5657 1.467 - 0.743 - - - - - 0.724 - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
58. obsl1b ENSDARG00000077388 2511 1.465 0.718 0.747 - - - - - - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
59. mthfr ENSDARG00000053087 373 1.46 0.711 0.749 - - - - - - - methylenetetrahydrofolate reductase (NAD(P)H) [Source:ZFIN;Acc:ZDB-GENE-041111-215]
60. sh3bgr ENSDARG00000021633 3498 1.458 0.754 0.704 - - - - - - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
61. mdh1b ENSDARG00000018008 3196 1.458 0.754 - 0.704 - - - - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
62. ntmt1 ENSDARG00000022399 5779 1.456 0.704 0.752 - - - - - - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
63. alg3 ENSDARG00000053155 1843 1.455 0.705 0.750 - - - - - - - asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-050522-334]
64. tnni2b.1 ENSDARG00000035958 51597 1.454 0.751 - 0.703 - - - - - - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
65. rpf2 ENSDARG00000043960 2719 1.451 0.717 0.734 - - - - - - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
66. IGFN1 IGFN1 5030 1.444 0.714 0.730 - - - - - - -
67. CR392006.1 CR392006.1 1401 1.438 0.730 0.708 - - - - - - -
68. lrrc8c ENSDARG00000099911 1499 1.436 0.728 0.708 - - - - - - - leucine rich repeat containing 8 VRAC subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2965]
69. tgm1l1 ENSDARG00000102106 1437 1.435 0.732 0.703 - - - - - - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
70. CR388002.1 CR388002.1 1998 1.431 0.722 0.709 - - - - - - -
71. myf6 ENSDARG00000029830 1911 1.423 - 0.717 - - - - - 0.706 - myogenic factor 6 [Source:ZFIN;Acc:ZDB-GENE-040309-2]
72. dmd ENSDARG00000008487, ENSDARG00000115779 536 1.416 0.715 - - - - - 0.701 - - dystrophin [Source:ZFIN;Acc:ZDB-GENE-010426-1]
73. myoz2b ENSDARG00000037266 2139 1.414 - 0.701 - 0.713 - - - - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
74. mybbp1a ENSDARG00000078214 2458 1.404 0.700 - - - - - 0.704 - - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
75. znf644a ENSDARG00000101361 819 0.921 - 0.921 - - - - - - - zinc finger protein 644a [Source:ZFIN;Acc:ZDB-GENE-030131-6244]
76. frmd6 ENSDARG00000002332 2698 0.899 - - - - - - 0.899 - - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
77. C3H19orf52 C3H19orf52 541 0.899 - 0.899 - - - - - - -
78. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 0.898 0.898 - - - - - - - - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
79. lnpep ENSDARG00000100394 1436 0.893 - 0.893 - - - - - - - leucyl/cystinyl aminopeptidase [Source:ZFIN;Acc:ZDB-GENE-030131-1534]
80. CLINT1 CLINT1 558 0.888 - - - - - 0.888 - - -
81. sh3rf1 ENSDARG00000070470 1463 0.885 - - - - - - 0.885 - - SH3 domain containing ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6288]
82. fgf1a ENSDARG00000017542, ENSDARG00000110811, ENSDARG00000114842 227 0.88 - 0.880 - - - - - - - fibroblast growth factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1729]
83. lrrfip1a ENSDARG00000030012 1263 0.875 - 0.875 - - - - - - - leucine rich repeat (in FLII) interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-99]
84. mroh1 ENSDARG00000016573 287 0.873 - 0.873 - - - - - - - maestro heat-like repeat family member 1 [Source:ZFIN;Acc:ZDB-GENE-090806-2]
85. igsf9ba ENSDARG00000033845 158 0.872 - 0.872 - - - - - - - immunoglobulin superfamily, member 9Ba [Source:ZFIN;Acc:ZDB-GENE-060503-729]
86. foxc1b ENSDARG00000055398 1499 0.872 - 0.872 - - - - - - - forkhead box C1b [Source:ZFIN;Acc:ZDB-GENE-010302-2]
87. PHKA2 ENSDARG00000030687 280 0.869 - - - - - 0.869 - - - phosphorylase kinase, alpha 2 (liver) [Source:ZFIN;Acc:ZDB-GENE-130422-1]
88. elp2 ENSDARG00000017199 399 0.866 - 0.866 - - - - - - - elongator acetyltransferase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060503-525]
89. sgcg_1 ENSDARG00000038107 1998 0.864 0.864 - - - - - - - - sarcoglycan, gamma [Source:ZFIN;Acc:ZDB-GENE-030724-2]
90. COQ5 ENSDARG00000035618 556 0.862 - 0.862 - - - - - - - coenzyme Q5, methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040912-5]
91. nol7 ENSDARG00000075795 1559 0.862 - 0.862 - - - - - - - nucleolar protein 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9100]
92. ehbp1l1b ENSDARG00000079895 559 0.86 - - - - - - 0.860 - - EH domain binding protein 1-like 1b [Source:ZFIN;Acc:ZDB-GENE-091204-238]
93. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 0.858 - 0.858 - - - - - - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
94. klhl41b ENSDARG00000006757 10762 0.857 0.857 - - - - - - - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
95. foxk1 ENSDARG00000037872 147 0.857 - 0.857 - - - - - - - forkhead box K1 [Source:ZFIN;Acc:ZDB-GENE-030131-6402]
96. CR354540.2 ENSDARG00000117517 18452 0.855 0.855 - - - - - - - -
97. nos1apb ENSDARG00000058701 148 0.854 - 0.854 - - - - - - - nitric oxide synthase 1 (neuronal) adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-100824-1]
98. ALDH1L2 ENSDARG00000070230 2550 0.848 0.848 - - - - - - - - aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
99. dtna ENSDARG00000031015 1746 0.845 0.845 - - - - - - - - dystrobrevin, alpha [Source:ZFIN;Acc:ZDB-GENE-070117-2]
100. cand2 ENSDARG00000005749, ENSDARG00000109268, ENSDARG00000112192 356 0.845 - 0.845 - - - - - - - cullin-associated and neddylation-dissociated 2 (putative) [Source:ZFIN;Acc:ZDB-GENE-060503-645]

There are 704 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA