Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tcea1

Gene Name Gene ID Reads Annotation
tcea1 ENSDARG00000003531 2912 transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]










Genes with expression patterns similar to tcea1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tcea1 ENSDARG00000003531 2912 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
2. wdr33 ENSDARG00000018272 4076 3.308 - - 0.732 - 0.922 - - 0.852 0.802 WD repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040924-3]
3. sumo3a ENSDARG00000028119 13447 3.129 - - - - - 0.804 0.796 0.710 0.819 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
4. nup205 ENSDARG00000042530, ENSDARG00000114489 2255 3.109 - - - - - 0.717 0.789 0.814 0.789 nucleoporin 205 [Source:ZFIN;Acc:ZDB-GENE-040715-8]
5. msl2a ENSDARG00000038909 1357 3.034 - - - 0.735 - 0.748 0.769 - 0.782 male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
6. snrpa ENSDARG00000018890 4593 2.455 - - - - - 0.753 - 0.836 0.866 small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
7. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 2.451 - - - - 0.942 0.728 - 0.781 - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
8. MTA1 ENSDARG00000007198 731 2.45 - - - - 0.944 - 0.802 - 0.704 metastasis associated 1 [Source:ZFIN;Acc:ZDB-GENE-131121-353]
9. si:dkey-19e4.5 ENSDARG00000089886 2562 2.442 - 0.740 - - 0.944 - - 0.758 - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
10. mapre1b ENSDARG00000002659 9119 2.435 - - - - 0.858 - - 0.718 0.859 microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
11. ssbp4 ENSDARG00000056483 10196 2.434 - - - 0.838 - - 0.801 0.795 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
12. SCML2 ENSDARG00000012949 1310 2.421 0.846 - - - - - 0.770 - 0.805 Scm polycomb group protein like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-546]
13. ccnb3 ENSDARG00000034855, ENSDARG00000110875 2123 2.416 0.884 - - - - 0.778 - 0.754 - cyclin B3 [Source:ZFIN;Acc:ZDB-GENE-060929-684]
14. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 2.404 - - 0.748 - 0.866 - - 0.790 - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
15. npm1b ENSDARG00000037675 5448 2.401 - - - - 0.823 0.738 0.840 - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
16. usf2 ENSDARG00000020228 2667 2.396 0.741 - - - 0.942 - - - 0.713 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
17. uhrf1 ENSDARG00000103409 3282 2.379 - - - 0.782 - 0.748 - 0.849 - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
18. nucks1a ENSDARG00000078473 28285 2.368 - 0.807 - - - 0.728 - 0.833 - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
19. polb ENSDARG00000003749 2049 2.368 - - - 0.750 0.916 0.702 - - - polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
20. ilf2 ENSDARG00000014591 14543 2.364 - - - 0.742 - - - 0.813 0.809 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
21. zgc:92664 ENSDARG00000015161 1651 2.361 - 0.703 - - 0.944 - - - 0.714 zgc:92664 [Source:ZFIN;Acc:ZDB-GENE-040718-119]
22. fam60al 2846 2.33 - - - 0.838 - - - 0.790 0.702 family with sequence similarity 60, member A, like
23. C1H4orf27 C1H4orf27 1961 2.328 - - - 0.732 - - 0.783 0.813 -
24. cbfb ENSDARG00000040917 1422 2.319 0.802 0.795 - - - - - 0.722 - core-binding factor, beta subunit [Source:ZFIN;Acc:ZDB-GENE-980526-440]
25. vezf1a ENSDARG00000008247 1449 2.312 - - - 0.807 - - - 0.719 0.786 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
26. sf1 ENSDARG00000008188 5142 2.306 - - - 0.732 - 0.748 - - 0.826 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
27. khsrp ENSDARG00000026489 15738 2.279 - - - - - 0.781 0.717 - 0.781 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
28. rbb4 rbb4 15541 2.275 - - 0.783 - - - - 0.703 0.789
29. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 2.271 - - - - - 0.710 - 0.737 0.824 minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
30. eif2s1a ENSDARG00000005827 5992 2.247 0.740 - - 0.721 - - - - 0.786 eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
31. hdac1 ENSDARG00000015427 19804 2.235 - - 0.723 - - 0.736 - - 0.776 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
32. atf7ip ENSDARG00000069619 5495 2.221 - - - 0.710 - - 0.717 0.794 - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
33. rrm1 ENSDARG00000014017 7296 2.215 - - - 0.746 0.723 - - - 0.746 ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
34. TRAK2 ENSDARG00000102471 2258 2.211 0.775 - - - - - 0.714 - 0.722 trafficking protein, kinesin binding 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7496]
35. bub3 ENSDARG00000075883 1333 2.201 0.797 - - - - - 0.702 - 0.702 BUB3 mitotic checkpoint protein [Source:ZFIN;Acc:ZDB-GENE-041010-210]
36. sumo1 ENSDARG00000044267 4242 2.197 - - 0.710 - - - - 0.714 0.773 small ubiquitin-like modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2186]
37. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 2.191 - - - 0.739 - - 0.709 0.743 - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
38. pak2b ENSDARG00000018476 4331 2.176 - 0.717 - - - - 0.713 - 0.746 p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
39. sf3b1 ENSDARG00000056138 5785 2.16 - - - - - - 0.737 0.715 0.708 splicing factor 3b, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040827-3]
40. rbm4.1 ENSDARG00000036386 625 2.158 - - - 0.714 - - 0.710 - 0.734 RNA binding motif protein 4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3902]
41. srsf6b ENSDARG00000016783 9926 2.145 - - - - - 0.703 0.708 0.734 - serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
42. uba1 ENSDARG00000037559 11579 2.139 - - - 0.703 - 0.727 0.709 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
43. ahctf1 ENSDARG00000077530 2315 2.132 0.706 - - - - - - 0.704 0.722 AT hook containing transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-070521-2]
44. smarce1 ENSDARG00000016871 9628 2.127 - - - 0.707 0.713 0.707 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
45. yth2 yth2 3716 2.126 0.701 - - 0.703 - - 0.722 - -
46. CASKIN2_1 CASKIN2_1 2299 1.778 0.835 - - - 0.943 - - - -
47. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.758 - - - - 0.918 - - - 0.840 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
48. ezh2 ENSDARG00000010571 3273 1.753 - - - - 0.920 - - - 0.833 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
49. ranbp1 ENSDARG00000014817 3371 1.743 - - - - 0.943 - - - 0.800 RAN binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2548]
50. fzd1 ENSDARG00000106062 1581 1.738 - - - - 0.934 - - - 0.804 frizzled class receptor 1 [Source:ZFIN;Acc:ZDB-GENE-990415-219]
51. wfikkn2a ENSDARG00000013460 859 1.714 - - - - 0.942 - - - 0.772 info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-120914-1]
52. snrpb ENSDARG00000011125 11729 1.707 - - - - 0.889 - 0.818 - - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
53. si:ch211-161h7.4 ENSDARG00000087238 4399 1.706 - - - - 0.931 - - - 0.775 si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
54. lmnb2 ENSDARG00000101624 11304 1.701 - - - - 0.902 - - 0.799 - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
55. adi1 ENSDARG00000020448 1402 1.683 - 0.742 - - 0.941 - - - - acireductone dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2799]
56. dhx9 ENSDARG00000079725 1241 1.682 - - - - 0.956 - - - 0.726 DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
57. ddx19 ENSDARG00000005699 4602 1.681 - - - - - 0.884 - 0.797 - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
58. nup98 ENSDARG00000074955 3998 1.679 - 0.729 - - 0.950 - - - - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
59. her4.3 ENSDARG00000070770 613 1.679 - - - - 0.946 - - - 0.733 hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
60. dla ENSDARG00000010791 9281 1.677 - - - - 0.921 - - - 0.756 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
61. pcdh18a ENSDARG00000089805 1096 1.674 - - - - 0.942 0.732 - - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
62. gnb2 ENSDARG00000035357, ENSDARG00000105310 1523 1.673 - - - - - 0.816 0.857 - - guanine nucleotide binding protein (G protein), beta polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050320-65]
63. dpysl3 ENSDARG00000002587 4381 1.669 - - - - 0.925 - - - 0.744 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
64. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.662 - - - - - - - 0.835 0.827 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
65. znf143a ENSDARG00000012887 1393 1.66 - - - - 0.934 - 0.726 - - zinc finger protein 143a [Source:ZFIN;Acc:ZDB-GENE-041114-154]
66. golga7 ENSDARG00000057676 4691 1.658 0.757 - - - 0.901 - - - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
67. HIST1H4C HIST1H4C 6190 1.657 - - - - 0.890 - - - 0.767
68. idh3a ENSDARG00000030278 2983 1.654 - - - - 0.894 0.760 - - - isocitrate dehydrogenase 3 (NAD+) alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1007]
69. ints1 ENSDARG00000100419 1958 1.651 - 0.713 - - 0.938 - - - - integrator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6523]
70. ndufa4 ENSDARG00000056108, ENSDARG00000116304 2355 1.649 - - - - 0.884 0.765 - - - NADH:ubiquinone oxidoreductase subunit A4 [Source:ZFIN;Acc:ZDB-GENE-040426-1962]
71. smurf2 ENSDARG00000038067 2057 1.648 - - - - 0.931 - - 0.717 - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
72. gnao1a ENSDARG00000016676 8184 1.648 - - - - 0.944 - - - 0.704 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
73. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 1.636 - - - - - - - 0.880 0.756 serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
74. creb1a ENSDARG00000053586 5068 1.63 - - - - - 0.801 - - 0.829 cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
75. cdc34b ENSDARG00000012627 3879 1.63 - 0.798 - - - - - 0.832 - cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
76. sf3a1 ENSDARG00000041887 6702 1.62 - - - - - - - 0.814 0.806 splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
77. snrnp70 ENSDARG00000077126 5921 1.62 - - - - - 0.789 - 0.831 - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
78. sh2b1 ENSDARG00000057679, ENSDARG00000113263 2194 1.617 - - - - - 0.843 - - 0.774 SH2B adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-070209-188]
79. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.616 - - - - - - - 0.739 0.877 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
80. ilf3b ENSDARG00000105177 9473 1.615 - - - - - - 0.760 0.855 - interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]
81. srsf5a ENSDARG00000029818 15600 1.612 - - - - 0.810 - - 0.802 - serine/arginine-rich splicing factor 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7336]
82. sdc2 ENSDARG00000002731 6607 1.61 0.770 - - - 0.840 - - - - syndecan 2 [Source:ZFIN;Acc:ZDB-GENE-021206-3]
83. prpf40a ENSDARG00000058467 6565 1.609 - - - - 0.872 - - - 0.737 PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
84. puf60a ENSDARG00000032175 5618 1.608 - - - - - - 0.752 - 0.856 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
85. ythdc1 ENSDARG00000051953, ENSDARG00000114892 4752 1.605 - - - - 0.871 - 0.734 - - YTH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]
86. zgc:112425 zgc:112425 293873 1.604 - - - - - 0.742 - 0.862 -
87. sdc4 ENSDARG00000059906 10105 1.602 - 0.708 - - 0.894 - - - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
88. dyrk1ab ENSDARG00000023814 1769 1.6 0.818 - - - - - - - 0.782 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
89. snrpf ENSDARG00000105037 10241 1.597 - - - - 0.798 - 0.799 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
90. amer2 ENSDARG00000075222 594 1.596 - - - - - - - 0.838 0.758 APC membrane recruitment protein 2 [Source:ZFIN;Acc:ZDB-GENE-070719-5]
91. ing4 ENSDARG00000030716 5908 1.595 0.831 - - - - - - 0.764 - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
92. ubtf ENSDARG00000035066 4070 1.595 - - - - - 0.830 0.765 - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
93. fubp1 ENSDARG00000029248 15259 1.593 - - - - 0.848 - - 0.745 - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
94. mxd3 ENSDARG00000098350 3040 1.593 - - - - - - - 0.800 0.793 MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
95. rbmx ENSDARG00000014244 3445 1.592 - - - - - - 0.800 - 0.792 RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]
96. bcl11ab ENSDARG00000063153 3032 1.592 - - - 0.715 - - - - 0.877 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
97. uck2a ENSDARG00000006074 1554 1.592 - - - - - - - 0.824 0.768 uridine-cytidine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7158]
98. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 1.592 - - - - - - 0.739 0.853 - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
99. apex1 ENSDARG00000045843 6345 1.591 - - - - - 0.753 - 0.838 - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
100. kmt2bb ENSDARG00000060697 5230 1.589 - - - - 0.838 0.751 - - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]

There are 1524 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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