Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tbx3a

Gene Name Gene ID Reads Annotation
tbx3a ENSDARG00000002216 2270 T-box 3a [Source:ZFIN;Acc:ZDB-GENE-070209-80]










Genes with expression patterns similar to tbx3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tbx3a ENSDARG00000002216 2270 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 T-box 3a [Source:ZFIN;Acc:ZDB-GENE-070209-80]
2. nme3 ENSDARG00000100990 3889 2.597 - - 0.961 - - 0.784 0.852 - - NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
3. SVIL SVIL 2589 2.444 - - 0.927 - - 0.790 0.727 - -
4. ppm1da ENSDARG00000009273 7713 2.411 - - 0.870 - - 0.740 0.801 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Da [Source:ZFIN;Acc:ZDB-GENE-040426-815]
5. slu7 ENSDARG00000038870 1311 2.376 0.721 - - - - 0.820 0.835 - - SLU7 homolog, splicing factor [Source:ZFIN;Acc:ZDB-GENE-041114-62]
6. cyp2aa3 ENSDARG00000103347 880 2.176 0.705 0.726 - - - - 0.745 - - cytochrome P450, family 2, subfamily AA, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-031030-8]
7. g6pca.1 ENSDARG00000031616 401 1.782 - - 0.980 - - - 0.802 - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031001-4]
8. aes ENSDARG00000021805, ENSDARG00000115836 1533 1.712 - - 0.973 - - - 0.739 - - amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]
9. rab5c ENSDARG00000026712 4733 1.71 - - 0.968 - - - 0.742 - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
10. sptbn2 ENSDARG00000053956 8452 1.695 - - 0.905 - - 0.790 - - - spectrin, beta, non-erythrocytic 2 [Source:ZFIN;Acc:ZDB-GENE-030131-787]
11. C7H20orf27 C7H20orf27 1864 1.695 - - 0.943 - - 0.752 - - -
12. ATL2 ENSDARG00000057719, ENSDARG00000113378, ENSDARG00000113487 1987 1.694 - 0.729 0.965 - - - - - - atlastin GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6505]
13. pak4 ENSDARG00000018110 1962 1.687 - - 0.903 - - 0.784 - - - p21 protein (Cdc42/Rac)-activated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040704-69]
14. ptger4b ENSDARG00000035415, ENSDARG00000109430 970 1.686 - - 0.979 - - 0.707 - - - prostaglandin E receptor 4 (subtype EP4) b [Source:ZFIN;Acc:ZDB-GENE-060531-102]
15. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 1.672 - - 0.965 - - 0.707 - - - F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
16. necap2 ENSDARG00000046002 4372 1.658 - - 0.947 - - - 0.711 - - NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
17. xpo1a ENSDARG00000078041 3544 1.622 - 0.702 0.920 - - - - - - exportin 1 (CRM1 homolog, yeast) a [Source:ZFIN;Acc:ZDB-GENE-050309-201]
18. thrap3b ENSDARG00000098228 4396 1.614 - - 0.869 - - 0.745 - - - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
19. arih2 ENSDARG00000012848 7087 1.614 - - 0.861 - - 0.753 - - - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
20. wdr11 ENSDARG00000075245 743 1.607 - 0.703 0.904 - - - - - - WD repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-081107-28]
21. tbca ENSDARG00000016754 6427 1.594 - - - - - 0.854 0.740 - - tubulin cofactor a [Source:ZFIN;Acc:ZDB-GENE-040426-962]
22. wu:fa03e10 2390 1.582 - - - - - 0.758 0.824 - - wu:fa03e10
23. mvp ENSDARG00000021242 6875 1.579 - - 0.861 - - - 0.718 - - major vault protein [Source:ZFIN;Acc:ZDB-GENE-030826-33]
24. sec61a1 ENSDARG00000021669 20408 1.579 - - 0.825 - - - 0.754 - - Sec61 translocon alpha 1 subunit [Source:ZFIN;Acc:ZDB-GENE-020418-2]
25. BX957362.1 ENSDARG00000105682 1941 1.578 - - - - - 0.815 0.763 - - uncharacterized LOC103911422 [Source:NCBI gene;Acc:103911422]
26. pikfyve ENSDARG00000056112 1583 1.575 - - - - - 0.769 0.806 - - phosphoinositide kinase, FYVE finger containing [Source:ZFIN;Acc:ZDB-GENE-030131-9636]
27. tbc1d1 ENSDARG00000062081, ENSDARG00000109222 1592 1.564 - - - - - 0.762 0.802 - - TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060710-1]
28. pdlim1 ENSDARG00000019845 5765 1.562 - - 0.842 - - - 0.720 - - PDZ and LIM domain 1 (elfin) [Source:ZFIN;Acc:ZDB-GENE-030131-5227]
29. mthfd1b ENSDARG00000040492 3784 1.557 - - - - - 0.803 0.754 - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b [Source:ZFIN;Acc:ZDB-GENE-020905-4]
30. suclg2 ENSDARG00000044914 7950 1.556 - - - - - 0.819 0.737 - - succinate-CoA ligase, GDP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-030114-3]
31. sun1 ENSDARG00000055350 3622 1.556 - - - - - 0.720 0.836 - - Sad1 and UNC84 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-551]
32. bsg ENSDARG00000019881 11894 1.554 - - - - - 0.727 0.827 - - basigin [Source:ZFIN;Acc:ZDB-GENE-030131-9638]
33. gdpd1 ENSDARG00000017261, ENSDARG00000111194 2853 1.551 - - - - - 0.761 0.790 - - glycerophosphodiester phosphodiesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040822-22]
34. SLC22A23 ENSDARG00000078856 2921 1.551 - - - - - 0.785 0.766 - - solute carrier family 22, member 23 [Source:ZFIN;Acc:ZDB-GENE-030131-3564]
35. ctsh ENSDARG00000041108 2873 1.543 - - - - - 0.730 0.813 - - cathepsin H [Source:ZFIN;Acc:ZDB-GENE-030131-3539]
36. si:ch211-226m16.2 ENSDARG00000036785 2163 1.541 - 0.814 - - - - 0.727 - - si:ch211-226m16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2302]
37. creb3l3 creb3l3 1981 1.534 - - - - - 0.777 0.757 - -
38. rpe ENSDARG00000005251, ENSDARG00000117024 3865 1.534 - - - - - 0.721 0.813 - - ribulose-5-phosphate-3-epimerase [Source:ZFIN;Acc:ZDB-GENE-030131-6837]
39. oclna ENSDARG00000005108 3280 1.533 - - - - - 0.719 0.814 - - occludin a [Source:ZFIN;Acc:ZDB-GENE-040426-2685]
40. ctsll ENSDARG00000011701, ENSDARG00000112885 6970 1.531 - - - - - 0.758 0.773 - - cathepsin L, like [Source:ZFIN;Acc:ZDB-GENE-041010-76]
41. dgat2 ENSDARG00000018846 5032 1.53 - - - - - 0.735 0.795 - - diacylglycerol O-acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-15]
42. cst3 ENSDARG00000007795 13753 1.525 - - - - - 0.739 0.786 - - cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]
43. zgc:152830 ENSDARG00000079932 12194 1.518 - - - - - 0.740 0.778 - - zgc:152830 [Source:ZFIN;Acc:ZDB-GENE-090312-55]
44. APOA4_1 APOA4_1 3645 1.518 - - - - - 0.700 0.818 - -
45. ambp ENSDARG00000004296, ENSDARG00000112731 1305 1.515 - - - - 0.720 - 0.795 - - alpha-1-microglobulin/bikunin precursor [Source:ZFIN;Acc:ZDB-GENE-040426-1608]
46. slc47a1 ENSDARG00000046012 1426 1.515 - - - - - 0.770 0.745 - - solute carrier family 47 (multidrug and toxin extrusion), member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-20]
47. nek6 ENSDARG00000037963 316 1.514 - 0.801 - - - 0.713 - - - NIMA-related kinase 6 [Source:ZFIN;Acc:ZDB-GENE-040724-133]
48. ywhaqb ENSDARG00000023323 28138 1.513 - - - - - 0.760 0.753 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-030131-7135]
49. slc7a8a ENSDARG00000075831 2987 1.512 - - - 0.751 - - 0.761 - - solute carrier family 7 (amino acid transporter light chain, L system), member 8a [Source:ZFIN;Acc:ZDB-GENE-121120-2]
50. atp6v0ca ENSDARG00000057853 23277 1.511 - - - - - 0.764 0.747 - - ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
51. lamp2 ENSDARG00000014914 5035 1.509 - - - - - 0.749 0.760 - - lysosomal-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030729-9]
52. DLC1 ENSDARG00000079317 2149 1.507 - - - - - 0.707 0.800 - - DLC1 Rho GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-130206-12]
53. nt5c3a ENSDARG00000058597 14299 1.505 - - - - - 0.710 0.795 - - 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
54. pgrmc1 ENSDARG00000054172 5423 1.505 - - - - - 0.728 0.777 - - progesterone receptor membrane component 1 [Source:ZFIN;Acc:ZDB-GENE-041114-91]
55. pon1 ENSDARG00000032496 1375 1.503 - - - - - 0.713 0.790 - - paraoxonase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-6]
56. arhgef18a ENSDARG00000011157 1702 1.502 - - - - - 0.777 0.725 - - rho/rac guanine nucleotide exchange factor (GEF) 18a [Source:ZFIN;Acc:ZDB-GENE-040516-14]
57. rpia ENSDARG00000056640, ENSDARG00000110576 8288 1.501 - - - 0.705 - - 0.796 - - ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase) [Source:ZFIN;Acc:ZDB-GENE-041114-24]
58. si:dkey-58f10.12 ENSDARG00000092680 258 1.5 - 0.731 - - - - 0.769 - - si:dkey-58f10.12 [Source:ZFIN;Acc:ZDB-GENE-060526-314]
59. amotl2b ENSDARG00000061948 974 1.5 - 0.741 - - - 0.759 - - - angiomotin like 2b [Source:ZFIN;Acc:ZDB-GENE-061103-307]
60. sid4 sid4 1358 1.499 - - - - - 0.758 0.741 - -
61. ANXA1 ANXA1 1103 1.494 - - - - - 0.743 0.751 - -
62. CTSA ENSDARG00000098114 1154 1.494 - - - - - 0.789 0.705 - - cathepsin A [Source:ZFIN;Acc:ZDB-GENE-030131-537]
63. slc13a2 ENSDARG00000053853 1164 1.49 - 0.705 - - - 0.785 - - - solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2389]
64. masp2 ENSDARG00000007988 331 1.489 - 0.778 - - - - 0.711 - - mannan-binding lectin serine peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-060130-154]
65. fbxo10 ENSDARG00000061936, ENSDARG00000116317 1015 1.489 - 0.748 - - - 0.741 - - - F-box protein 10 [Source:ZFIN;Acc:ZDB-GENE-090313-270]
66. stom ENSDARG00000003835, ENSDARG00000109478, ENSDARG00000109779 5514 1.484 - 0.757 - - - 0.727 - - - stomatin [Source:ZFIN;Acc:ZDB-GENE-980526-486]
67. f10 ENSDARG00000088581 4968 1.481 - - - - - 0.709 0.772 - - coagulation factor X [Source:ZFIN;Acc:ZDB-GENE-021206-9]
68. gabarapl2 ENSDARG00000027200 5120 1.481 - - - 0.726 - - 0.755 - - GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336]
69. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.481 - - - - - 0.753 0.728 - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
70. serpina1l ENSDARG00000090850 10625 1.479 - - - - - 0.705 0.774 - - serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1, like [Source:ZFIN;Acc:ZDB-GENE-040721-3]
71. gata6 ENSDARG00000103589 746 1.475 - - - - - 0.719 0.756 - - GATA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-000622-1]
72. etv5b ENSDARG00000044511, ENSDARG00000113744 1967 1.469 - - - - - 0.754 0.715 - - ets variant 5b [Source:ZFIN;Acc:ZDB-GENE-991228-4]
73. gnpda1 ENSDARG00000037307, ENSDARG00000109317, ENSDARG00000114846 2191 1.468 - - - - 0.702 - 0.766 - - glucosamine-6-phosphate deaminase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-417]
74. vtnb ENSDARG00000053831 2364 1.465 - - - - - 0.703 0.762 - - vitronectin b [Source:ZFIN;Acc:ZDB-GENE-041116-1]
75. gdap2 ENSDARG00000021569 1013 1.46 - 0.718 - - - - 0.742 - - ganglioside induced differentiation associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-31]
76. zgc:136410 ENSDARG00000102241 8433 1.459 - - - - - 0.728 0.731 - - zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
77. rhbdl2 ENSDARG00000069833, ENSDARG00000109477 891 1.444 - 0.731 - - - 0.713 - - - rhomboid, veinlet-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-732]
78. cpvl ENSDARG00000056480 2115 1.442 - - - - - 0.718 0.724 - - carboxypeptidase, vitellogenic-like [Source:ZFIN;Acc:ZDB-GENE-031219-2]
79. cfhl2 ENSDARG00000103760, ENSDARG00000110252 579 1.438 - - - - - 0.736 0.702 - - complement factor H like 2 [Source:ZFIN;Acc:ZDB-GENE-041114-123]
80. bach1 bach1 1121 1.421 - - - - - 0.709 0.712 - -
81. svopl ENSDARG00000057983, ENSDARG00000116460 975 0.985 - - 0.985 - - - - - - SVOP-like [Source:ZFIN;Acc:ZDB-GENE-041114-109]
82. tnikb ENSDARG00000009031 1836 0.981 - - 0.981 - - - - - - TRAF2 and NCK interacting kinase b [Source:ZFIN;Acc:ZDB-GENE-051113-320]
83. nbeal2 ENSDARG00000098641 1243 0.98 - - 0.980 - - - - - - neurobeachin-like 2 [Source:ZFIN;Acc:ZDB-GENE-100922-283]
84. zgc:163098 ENSDARG00000078911, ENSDARG00000111691, ENSDARG00000113714, ENSDARG00000115110 1802 0.98 - - 0.980 - - - - - - zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]
85. psd3l ENSDARG00000104820 1201 0.98 - - 0.980 - - - - - - pleckstrin and Sec7 domain containing 3, like [Source:ZFIN;Acc:ZDB-GENE-030131-8195]
86. im:7136729 im:7136729 1625 0.98 - - 0.980 - - - - - -
87. TCAIM ENSDARG00000079881 424 0.98 - - 0.980 - - - - - - T cell activation inhibitor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-160113-67]
88. nckipsd ENSDARG00000079475 777 0.98 - - 0.980 - - - - - - NCK interacting protein with SH3 domain [Source:ZFIN;Acc:ZDB-GENE-130326-2]
89. srp19 ENSDARG00000035699 2624 0.979 - - 0.979 - - - - - - signal recognition particle 19 [Source:ZFIN;Acc:ZDB-GENE-040426-2657]
90. syn1 ENSDARG00000060368, ENSDARG00000111164 397 0.979 - - 0.979 - - - - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
91. psen2 ENSDARG00000015540 832 0.979 - - 0.979 - - - - - - presenilin 2 [Source:ZFIN;Acc:ZDB-GENE-000330-9]
92. C22H19orf44 C22H19orf44 481 0.978 - - 0.978 - - - - - -
93. gpatch2 1221 0.978 - - 0.978 - - - - - - G patch domain containing 2, transcript variant X1
94. nf1b ENSDARG00000004184 548 0.978 - - 0.978 - - - - - - neurofibromin 1b [Source:ZFIN;Acc:ZDB-GENE-091111-4]
95. scd ENSDARG00000033662 146 0.978 - - 0.978 - - - - - - stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
96. ercc2 ENSDARG00000021985 678 0.978 - - 0.978 - - - - - - excision repair cross-complementation group 2 [Source:ZFIN;Acc:ZDB-GENE-040426-997]
97. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 0.978 - - 0.978 - - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
98. ELOVL4 ELOVL4 3026 0.978 - - 0.978 - - - - - -
99. fam135a ENSDARG00000059843 2352 0.978 - - 0.978 - - - - - - family with sequence similarity 135, member A [Source:ZFIN;Acc:ZDB-GENE-080130-1]
100. ZNF648 ENSDARG00000104823 194 0.978 - - 0.978 - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]

There are 1187 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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