Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tbx1

Gene Name Gene ID Reads Annotation
tbx1 ENSDARG00000031891 397 T-box 1 [Source:ZFIN;Acc:ZDB-GENE-030805-5]










Genes with expression patterns similar to tbx1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tbx1 ENSDARG00000031891 397 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 T-box 1 [Source:ZFIN;Acc:ZDB-GENE-030805-5]
2. COL9A1 COL9A1 264 3.279 - - 0.790 0.933 0.829 - - 0.727 -
3. prom1b ENSDARG00000034007, ENSDARG00000111216, ENSDARG00000111262 14 2.445 - - - - 0.824 0.828 0.793 - - prominin 1 b [Source:ZFIN;Acc:ZDB-GENE-031003-1]
4. cyp26c1 ENSDARG00000056029 1426 2.404 - - - 0.773 0.713 - - - 0.918 cytochrome P450, family 26, subfamily C, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050714-2]
5. foxl2 61 2.403 - - 0.731 - 0.844 0.828 - - - forkhead box L2, transcript variant X1
6. nkx2.5 ENSDARG00000018004, ENSDARG00000116714 23 2.294 - - 0.762 0.738 0.794 - - - - NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321]
7. irx7 ENSDARG00000002601 72 1.756 - - 0.908 - 0.848 - - - - iroquois homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-020103-1]
8. golim4b ENSDARG00000014545 628 1.705 - - - - - 0.762 0.943 - - golgi integral membrane protein 4b [Source:ZFIN;Acc:ZDB-GENE-050327-74]
9. efna2 efna2 428 1.69 - - 0.811 - 0.879 - - - -
10. foxi1 ENSDARG00000104566 176 1.689 - - - 0.913 0.776 - - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
11. phox2a ENSDARG00000007406 470 1.687 - - 0.819 - 0.868 - - - - paired-like homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-000223-14]
12. pax5 ENSDARG00000037383 319 1.686 - - 0.896 - 0.790 - - - - paired box 5 [Source:ZFIN;Acc:ZDB-GENE-001030-2]
13. CR352249.1 ENSDARG00000114701 857 1.66 - - - - - 0.857 0.803 - - solute carrier family 38, member 8b [Source:NCBI gene;Acc:795255]
14. si:ch211-250n8.1 ENSDARG00000088736 4 1.629 - - 0.836 - - - 0.793 - - si:ch211-250n8.1 [Source:ZFIN;Acc:ZDB-GENE-130603-2]
15. dmbx1a ENSDARG00000009922 284 1.609 - - 0.777 - 0.832 - - - - diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1]
16. FGFBP1 FGFBP1 7 1.593 - - - 0.717 0.876 - - - -
17. CABZ01070852.2 ENSDARG00000114999 16 1.583 - - - - - 0.782 0.801 - -
18. paplnb ENSDARG00000042186 18 1.572 - - - - - 0.779 0.793 - - papilin b, proteoglycan-like sulfated glycoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-6023]
19. sema3bl ENSDARG00000007560, ENSDARG00000110211 30 1.566 - - - - - 0.828 0.738 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl [Source:ZFIN;Acc:ZDB-GENE-030131-2956]
20. fgfbp2 fgfbp2 14 1.557 - - 0.834 - 0.723 - - - -
21. CABZ01048021.1 CABZ01048021.1 15 1.548 - - - 0.755 - - 0.793 - -
22. cyr61l1 ENSDARG00000035422, ENSDARG00000112039, ENSDARG00000114683 332 1.544 - - - - - 0.810 0.734 - - cysteine-rich, angiogenic inducer 61 like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-136]
23. acta2 ENSDARG00000045180 96 1.525 - - - 0.738 0.787 - - - - actin, alpha 2, smooth muscle, aorta [Source:ZFIN;Acc:ZDB-GENE-030131-1229]
24. CMKLR1 ENSDARG00000090890 36 1.521 - - 0.749 - 0.772 - - - - chemokine-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-060526-126]
25. phox2bb_1 ENSDARG00000091029 212 1.504 - - 0.777 - 0.727 - - - - paired-like homeobox 2bb [Source:ZFIN;Acc:ZDB-GENE-050407-3]
26. foxl1 ENSDARG00000008133, ENSDARG00000111418 64 1.49 - - 0.786 - 0.704 - - - - forkhead box L1 [Source:ZFIN;Acc:ZDB-GENE-040426-1181]
27. tbx20 ENSDARG00000005150 335 1.465 - - - 0.758 0.707 - - - - T-box 20 [Source:ZFIN;Acc:ZDB-GENE-000427-7]
28. mab21l2 ENSDARG00000015266 1687 1.462 - - 0.734 - 0.728 - - - - mab-21-like 2 [Source:ZFIN;Acc:ZDB-GENE-011101-3]
29. fzd8a ENSDARG00000045444 802 1.456 - - 0.702 0.754 - - - - - frizzled class receptor 8a [Source:ZFIN;Acc:ZDB-GENE-000328-3]
30. rbpja ENSDARG00000003398 1309 0.944 - - - - - - - - 0.944 recombination signal binding protein for immunoglobulin kappa J region a [Source:ZFIN;Acc:ZDB-GENE-031117-1]
31. arhgap42a ENSDARG00000056619, ENSDARG00000116136 865 0.938 - - - - - - - - 0.938 Rho GTPase activating protein 42a [Source:ZFIN;Acc:ZDB-GENE-030131-8077]
32. twistnb ENSDARG00000024416 1077 0.937 - - - - - - - - 0.937 TWIST neighbor [Source:ZFIN;Acc:ZDB-GENE-041007-3]
33. panx1a ENSDARG00000025285 352 0.937 - - - - - - - - 0.937 pannexin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-766]
34. PACS1_1 PACS1_1 1264 0.935 - - - - - - - - 0.935
35. il17rd ENSDARG00000098359 1153 0.934 - - - - - - - - 0.934 interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
36. U6 U6 931 0.934 - - - - - - - - 0.934
37. si:dkeyp-4f2.5 si:dkeyp-4f2.5 232 0.934 - - - - - - - - 0.934
38. narfl ENSDARG00000062216 768 0.934 - - - - - - - - 0.934 nuclear prelamin A recognition factor-like [Source:ZFIN;Acc:ZDB-GENE-070209-119]
39. TLN2 TLN2 359 0.933 - - - - - - - - 0.933
40. m6pr ENSDARG00000018432 1411 0.932 - - - - - - - - 0.932 mannose-6-phosphate receptor (cation dependent) [Source:ZFIN;Acc:ZDB-GENE-040426-2285]
41. ptpn2a ENSDARG00000016481 493 0.932 - - - - - - - - 0.932 protein tyrosine phosphatase, non-receptor type 2, a [Source:ZFIN;Acc:ZDB-GENE-040426-1196]
42. ing2 ENSDARG00000104907 1336 0.932 - - - - - - - - 0.932 inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
43. sin3ab ENSDARG00000059812 2140 0.932 - - - - - - - - 0.932 SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
44. MPRIP_1 ENSDARG00000105209 898 0.932 - - - - - - - - 0.932 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
45. RNF5 ENSDARG00000075606 1730 0.932 - - - - - - - - 0.932 ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
46. coil ENSDARG00000040070 863 0.932 - - - - - - - - 0.932 coilin p80 [Source:ZFIN;Acc:ZDB-GENE-000330-8]
47. PGBD4_3 PGBD4_3 861 0.931 - - - - - - - - 0.931
48. CACUL1 ENSDARG00000021885 691 0.931 - - - - - - - - 0.931 CDK2 associated cullin domain 1 [Source:ZFIN;Acc:ZDB-GENE-170113-2]
49. C19H18orf21 C19H18orf21 338 0.931 - - - - - - - - 0.931
50. nudt3b ENSDARG00000042123 311 0.93 - - - - - - - - 0.930 nudix (nucleoside diphosphate linked moiety X)-type motif 3b [Source:ZFIN;Acc:ZDB-GENE-041010-128]
51. sox8 sox8 109 0.929 - - - - - - - - 0.929
52. mpv17 ENSDARG00000032431 1225 0.929 - - - - - - - - 0.929 MpV17 mitochondrial inner membrane protein [Source:ZFIN;Acc:ZDB-GENE-040426-1168]
53. ppp6r2b ENSDARG00000069654 323 0.929 - - - - - - - - 0.929 protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
54. phactr4a ENSDARG00000015552 1315 0.928 - - - - - - - - 0.928 phosphatase and actin regulator 4a [Source:ZFIN;Acc:ZDB-GENE-051030-69]
55. bmp2k ENSDARG00000020009, ENSDARG00000115681 955 0.928 - - - - - - - - 0.928 BMP2 inducible kinase [Source:ZFIN;Acc:ZDB-GENE-041212-72]
56. nol7 ENSDARG00000075795 1559 0.928 - - - - - - - - 0.928 nucleolar protein 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9100]
57. ZDHHC3 ZDHHC3 1208 0.928 - - - - - - - - 0.928
58. ube3b ENSDARG00000061960 978 0.928 - - - - - - - - 0.928 ubiquitin protein ligase E3B [Source:ZFIN;Acc:ZDB-GENE-060526-231]
59. CABZ01088509.1 CABZ01088509.1 1213 0.927 - - - - - - - - 0.927
60. fam20c fam20c 603 0.927 - - - - - - - - 0.927
61. snap91 ENSDARG00000098809 844 0.927 - - - - - - - - 0.927 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
62. ccdc90b ENSDARG00000044626, ENSDARG00000110887 501 0.927 - - - - - - - - 0.927 coiled-coil domain containing 90B [Source:ZFIN;Acc:ZDB-GENE-040724-162]
63. zgc:136439 ENSDARG00000009267 720 0.926 - - - - - - - - 0.926 zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
64. PCDH20 ENSDARG00000036424, ENSDARG00000101910 90 0.926 - - - - - - - - 0.926 protocadherin 20 [Source:NCBI gene;Acc:100007362]
65. mylkb ENSDARG00000004753 95 0.926 - - - - - - - - 0.926 myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
66. zgc:154006 ENSDARG00000061797 152 0.926 - - - - - - - - 0.926 zgc:154006 [Source:ZFIN;Acc:ZDB-GENE-061013-134]
67. MON1B_1 MON1B_1 697 0.926 - - - - - - - - 0.926
68. pfkfb2a ENSDARG00000023840 184 0.926 - - - - - - - - 0.926 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-040426-966]
69. fbxl4 ENSDARG00000026941, ENSDARG00000113167 396 0.926 - - - - - - - - 0.926 F-box and leucine-rich repeat protein 4 [Source:ZFIN;Acc:ZDB-GENE-041114-187]
70. ZNF337_22 ZNF337_22 322 0.926 - - - - - - - - 0.926
71. def6b ENSDARG00000044524 99 0.926 - - - - - - - - 0.926 differentially expressed in FDCP 6b homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-110408-59]
72. fam65b 557 0.925 - - - - - - - - 0.925 family with sequence similarity 65, member B, transcript variant X4
73. si:ch211-135f11.1 166 0.925 - - - - - - - - 0.925 si:ch211-135f11.1, transcript variant X3
74. HTR1E 103 0.925 - - - - - - - - 0.925 5-hydroxytryptamine receptor 1E
75. pex7 ENSDARG00000042553 409 0.925 - - - - - - - - 0.925 peroxisomal biogenesis factor 7 [Source:ZFIN;Acc:ZDB-GENE-050320-105]
76. sar1b ENSDARG00000103403 1699 0.925 - - - - - - - - 0.925 secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
77. slc6a19b ENSDARG00000056719 140 0.925 - - - - - - - - 0.925 solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
78. C25H11orf24 C25H11orf24 1011 0.925 - - - - - - - - 0.925
79. dlg5a ENSDARG00000074059 1834 0.925 - - - - - - - - 0.925 discs, large homolog 5a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-3149]
80. slc25a23a ENSDARG00000005690 824 0.924 - - - - - - - - 0.924 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23a [Source:ZFIN;Acc:ZDB-GENE-121214-154]
81. ints10 ENSDARG00000043031 455 0.924 - - - - - - - - 0.924 integrator complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-050522-2]
82. prc1a ENSDARG00000100918 1746 0.924 - - - - - - - - 0.924 protein regulator of cytokinesis 1a [Source:ZFIN;Acc:ZDB-GENE-020801-3]
83. smim8 ENSDARG00000071040 622 0.923 - - - - - - - - 0.923 small integral membrane protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-423]
84. FOXL2 239 0.923 - - 0.923 - - - - - - forkhead box L2, transcript variant X1
85. sppl2 ENSDARG00000030448 1040 0.923 - - - - - - - - 0.923 signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
86. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 0.923 - - - - - - - - 0.923 contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
87. LARS2 ENSDARG00000075337 181 0.923 - - - - - - - - 0.923 leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
88. MALSU1 MALSU1 1251 0.923 - - - - - - - - 0.923
89. cep170a cep170a 652 0.922 - - - - - - - - 0.922
90. THEM4 ENSDARG00000061621 364 0.922 - - - - - - - - 0.922 thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
91. ANKRD50 ENSDARG00000045666 1756 0.922 - - - - - - - - 0.922 ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]
92. snrpa1 ENSDARG00000024651 3306 0.922 - - - - - - - - 0.922 small nuclear ribonucleoprotein polypeptide A' [Source:ZFIN;Acc:ZDB-GENE-041114-82]
93. HIP1R HIP1R 490 0.922 - - - - - - - - 0.922
94. stmn4l ENSDARG00000043932 654 0.921 - - - - - - - - 0.921 stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
95. pdzd2 ENSDARG00000059801, ENSDARG00000109983 1634 0.921 - - - - - - - - 0.921 PDZ domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-297]
96. tacc1 ENSDARG00000073753 1127 0.921 - - - - - - - - 0.921 transforming, acidic coiled-coil containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-090521-5]
97. slc12a9 ENSDARG00000060366 293 0.921 - - - - - - - - 0.921 solute carrier family 12, member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]
98. mir205 2147 0.921 - - - - - - - - 0.921 microRNA 205
99. LDLR LDLR 838 0.92 - - - - - - - - 0.920
100. marveld1 ENSDARG00000011724 1025 0.92 - - - - - - - - 0.920 MARVEL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-33]

There are 731 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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