Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tbr1b

Gene Name Gene ID Reads Annotation
tbr1b ENSDARG00000004712 248 T-box, brain, 1b [Source:ZFIN;Acc:ZDB-GENE-000323-1]










Genes with expression patterns similar to tbr1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tbr1b ENSDARG00000004712 248 5 - - 1.000 1.000 1.000 - - 1.000 1.000 T-box, brain, 1b [Source:ZFIN;Acc:ZDB-GENE-000323-1]
2. eomesa ENSDARG00000006640 257 3.74 - - 0.943 - 0.936 - - 0.931 0.930 eomesodermin homolog a [Source:ZFIN;Acc:ZDB-GENE-001228-1]
3. tbr1a ENSDARG00000076259 341 2.612 - - 0.943 - 0.775 - - - 0.894 T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
4. neurod6a ENSDARG00000040008 17 2.604 - - 0.831 - - - - 0.874 0.899 neuronal differentiation 6a [Source:ZFIN;Acc:ZDB-GENE-010608-1]
5. foxg1a ENSDARG00000070769 928 2.29 - - 0.748 - 0.725 - - - 0.817 forkhead box G1a [Source:ZFIN;Acc:ZDB-GENE-990415-267]
6. MPPED1 ENSDARG00000088181 117 1.832 - - - - - - - 0.926 0.906 metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
7. tcf7l2 ENSDARG00000004415, ENSDARG00000110486 1920 1.8 - - - - - - - 0.855 0.945 transcription factor 7 like 2 [Source:ZFIN;Acc:ZDB-GENE-991110-8]
8. DMBX1 DMBX1 140 1.781 - - - - - - - 0.901 0.880
9. synpr ENSDARG00000044278 20 1.729 - - - - - - - 0.938 0.791 synaptoporin [Source:ZFIN;Acc:ZDB-GENE-030616-625]
10. si:dkey-235h8.1 si:dkey-235h8.1 2457 1.725 - - 0.904 - 0.821 - - - -
11. zfpm2b ENSDARG00000100560 125 1.711 - - - - - - - 0.851 0.860 zinc finger protein, FOG family member 2b [Source:ZFIN;Acc:ZDB-GENE-060130-5]
12. taar14h ENSDARG00000090464 22 1.71 - - - - 0.855 - - - 0.855 trace amine associated receptor 14h [Source:ZFIN;Acc:ZDB-GENE-041014-32]
13. prdm1b ENSDARG00000098925 440 1.709 - - 0.878 - 0.831 - - - - PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
14. fezf2 ENSDARG00000070677 224 1.706 - - 0.920 - - - - - 0.786 FEZ family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-001103-3]
15. neurod6b ENSDARG00000020794 164 1.689 - - 0.781 - 0.908 - - - - neuronal differentiation 6b [Source:ZFIN;Acc:ZDB-GENE-010608-2]
16. nfia ENSDARG00000062420 573 1.66 - - 0.786 - - - - - 0.874 nuclear factor I/A [Source:ZFIN;Acc:ZDB-GENE-050208-501]
17. gata2a ENSDARG00000059327 326 1.631 - - - - - - - 0.824 0.807 GATA binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-980526-260]
18. yjefn3 ENSDARG00000061692 211 1.602 - - 0.752 - - - - 0.850 - YjeF N-terminal domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050208-755]
19. cygb2 ENSDARG00000070148, ENSDARG00000109892, ENSDARG00000114471 30 1.597 - - - - - - - 0.800 0.797 cytoglobin 2 [Source:ZFIN;Acc:ZDB-GENE-060920-1]
20. bcl11ba ENSDARG00000062510 169 1.595 - - 0.872 - - - - 0.723 - B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]
21. nr2e1 ENSDARG00000017107 340 1.58 - - 0.727 - - - - - 0.853 nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
22. si:ch211-10a23.2 ENSDARG00000060656 471 1.571 - - - - 0.787 - - - 0.784 si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
23. si:ch211-237l4.6 ENSDARG00000056915 49 1.566 - - 0.843 - 0.723 - - - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
24. otx1a 1607 1.562 - - - - - - - 0.782 0.780 orthodenticle homeobox 1a
25. CR354430.1 ENSDARG00000082399 4 1.551 - - - - - - - 0.784 0.767
26. pvalb5 ENSDARG00000032836 242 1.54 - - - - 0.824 - - - 0.716 parvalbumin 5 [Source:ZFIN;Acc:ZDB-GENE-050417-336]
27. cacna1r cacna1r 16 1.528 - - 0.772 - - - - - 0.756
28. SATB1 SATB1 928 1.524 - - - - - - - 0.766 0.758
29. cuedc1a ENSDARG00000068716 232 1.512 - - - - - - - 0.807 0.705 CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
30. DSCAML1 ENSDARG00000098057 321 1.501 - - 0.752 - - - - 0.749 - Down syndrome cell adhesion molecule like 1 [Source:ZFIN;Acc:ZDB-GENE-110601-1]
31. lingo1b ENSDARG00000035899 86 1.5 - - - - - - - 0.737 0.763 leucine rich repeat and Ig domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040912-136]
32. ptprz1a ENSDARG00000051814 385 1.497 - - - - - - - 0.737 0.760 protein tyrosine phosphatase, receptor-type, Z polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-090406-1]
33. ARX ARX 71 1.481 - - 0.763 0.718 - - - - -
34. TMEM57 TMEM57 260 1.478 - - 0.770 - 0.708 - - - -
35. pou3f2a ENSDARG00000070220 817 1.472 - - - - - - - 0.745 0.727 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
36. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.439 - - - - - - - 0.721 0.718 SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
37. zgc:173652_1 4 0.951 - - - - - - - 0.951 - zgc:173652
38. helt ENSDARG00000056400 482 0.941 - - - - - - - - 0.941 helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
39. or128-5 ENSDARG00000087635 5 0.915 - - - - - - - 0.915 - odorant receptor, family E, subfamily 128, member 5 [Source:ZFIN;Acc:ZDB-GENE-980526-343]
40. emx3 ENSDARG00000020417 85 0.911 - - - - - - - - 0.911 empty spiracles homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-53]
41. fstl5 ENSDARG00000040198 213 0.91 - - 0.910 - - - - - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
42. si:ch211-191a6.3 si:ch211-191a6.3 6 0.904 - - - - 0.904 - - - -
43. crygm2d14 ENSDARG00000087301 66 0.904 - - - - 0.904 - - - - crystallin, gamma M2d14 [Source:ZFIN;Acc:ZDB-GENE-070822-20]
44. chd5 ENSDARG00000105083 132 0.901 - - - - - - - - 0.901 chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
45. BX088708.1 BX088708.1 6503 0.9 - - - - - - - 0.900 -
46. lhx9 ENSDARG00000056979 249 0.898 - - - - - - - - 0.898 LIM homeobox 9 [Source:ZFIN;Acc:ZDB-GENE-050417-210]
47. rprma ENSDARG00000053383 12 0.896 - - - - - - - 0.896 - reprimo, TP53 dependent G2 arrest mediator candidate a [Source:ZFIN;Acc:ZDB-GENE-050522-218]
48. msnb ENSDARG00000028740, ENSDARG00000109311, ENSDARG00000110190 24 0.892 - - 0.892 - - - - - - moesin b [Source:ZFIN;Acc:ZDB-GENE-030717-7]
49. CDHR1 CDHR1 16 0.89 - - - - - - - 0.890 -
50. myh6 ENSDARG00000090637 66 0.882 - - 0.882 - - - - - - myosin, heavy chain 6, cardiac muscle, alpha [Source:ZFIN;Acc:ZDB-GENE-031112-1]
51. FAM177A1 ENSDARG00000079636 19 0.877 - - - - - - - 0.877 - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
52. tfap2d ENSDARG00000023272 308 0.871 - - - - - - - - 0.871 transcription factor AP-2 delta (activating enhancer binding protein 2 delta) [Source:ZFIN;Acc:ZDB-GENE-050913-99]
53. CABZ01081748.1 ENSDARG00000102139 31 0.864 - - - - - - - 0.864 - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
54. gabbr1b ENSDARG00000016667 14 0.863 - - - - - - - - 0.863 gamma-aminobutyric acid (GABA) B receptor, 1b [Source:ZFIN;Acc:ZDB-GENE-060503-5]
55. fabp11b ENSDARG00000002311 354 0.862 - - - - 0.862 - - - - fatty acid binding protein 11b [Source:ZFIN;Acc:ZDB-GENE-050522-391]
56. si:ch211-197n1.2 58 0.861 - - - - - - - - 0.861 si:ch211-197n1.2, transcript variant X1
57. gcsha ENSDARG00000091655, ENSDARG00000111225 1 0.854 - - - - - - - 0.854 - glycine cleavage system protein H (aminomethyl carrier), a [Source:ZFIN;Acc:ZDB-GENE-050320-18]
58. p2ry10 ENSDARG00000062811, ENSDARG00000111991, ENSDARG00000112838 4 0.854 - - - - - - - 0.854 - P2Y receptor family member 10 [Source:ZFIN;Acc:ZDB-GENE-070410-105]
59. pcdh1g2 ENSDARG00000101232 5 0.854 - - - - - - - 0.854 - protocadherin 1 gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050608-2]
60. si:ch73-27e22.6 ENSDARG00000031731 12 0.854 - - - - - - - 0.854 - si:ch73-27e22.6 [Source:ZFIN;Acc:ZDB-GENE-070705-234]
61. hesx1 ENSDARG00000060734 2 0.854 - - - - - - - 0.854 - HESX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-130]
62. CT583679.2 CT583679.2 10 0.854 - - - - - - - 0.854 -
63. rfc4 ENSDARG00000042458 2 0.854 - - - - - - - 0.854 - replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]
64. zgc:113295_2 ENSDARG00000074768, ENSDARG00000103947 4 0.854 - - - - - - - 0.854 - zgc:113295 [Source:ZFIN;Acc:ZDB-GENE-050320-122]
65. ATP13A5 ATP13A5 13 0.854 - - - - - - - 0.854 -
66. CABZ01048349.1 CABZ01048349.1 1 0.854 - - - - - - - 0.854 -
67. CCDC13 ENSDARG00000063451 10 0.854 - - - - - - - - 0.854 coiled-coil domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-061207-11]
68. CR853287.1 CR853287.1 6 0.854 - - - - - - - 0.854 -
69. Mar-11 Mar-11 5 0.854 - - - - - - - 0.854 -
70. trpa1a ENSDARG00000016699 43 0.854 - - - - - - - 0.854 - transient receptor potential cation channel, subfamily A, member 1a [Source:ZFIN;Acc:ZDB-GENE-050105-6]
71. or132-2 ENSDARG00000094515, ENSDARG00000105762 1 0.854 - - - - - - - 0.854 - odorant receptor, family H, subfamily 132, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-48]
72. snai3 ENSDARG00000031243 31 0.854 - - - - - - - 0.854 - snail family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-061013-757]
73. or125-7 ENSDARG00000093183 1 0.854 - - - - - - - 0.854 - odorant receptor, family E, subfamily 125, member 7 [Source:ZFIN;Acc:ZDB-GENE-070806-97]
74. CACNG5 CACNG5 1 0.854 - - - - - - - 0.854 -
75. si:dkey-122c11.7 ENSDARG00000103721 3 0.854 - - - - - - - 0.854 - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
76. si:ch211-133l5.8 ENSDARG00000027676 23 0.854 - - - - - - - 0.854 - si:ch211-133l5.8 [Source:ZFIN;Acc:ZDB-GENE-081104-118]
77. NUMA1_3 NUMA1_3 5 0.854 - - - - - - - 0.854 -
78. zgc:162971 ENSDARG00000101093 1 0.854 - - - - - - - 0.854 - zgc:162971 [Source:ZFIN;Acc:ZDB-GENE-070424-48]
79. si:dkey-247i3.1 ENSDARG00000076252 11 0.854 - - - - - - - 0.854 - si:dkey-247i3.1 [Source:ZFIN;Acc:ZDB-GENE-110913-84]
80. ace ENSDARG00000079166 54 0.853 - - - - 0.853 - - - - angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1826]
81. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 0.853 - - - - 0.853 - - - - H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]
82. CU929052.1 CU929052.1 642 0.853 - - - - 0.853 - - - -
83. hs3st1l2 ENSDARG00000035578 279 0.851 - - - - - - - - 0.851 heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-070202-3]
84. dmrta2 ENSDARG00000039412 328 0.847 - - - - - - - - 0.847 DMRT-like family A2 [Source:ZFIN;Acc:ZDB-GENE-041116-2]
85. otx2 766 0.844 - - - - - - - - 0.844 orthodenticle homeobox 2, transcript variant X2
86. PEG3_20 PEG3_20 6 0.84 - - - - - - - - 0.840
87. si:ch211-197e7.8 si:ch211-197e7.8 4 0.84 - - - - - - - - 0.840
88. otx1b 96 0.839 - - - - - - - - 0.839 orthodenticle homeobox 1b
89. sox14 ENSDARG00000070929 352 0.835 - - - - - - - 0.835 - SRY (sex determining region Y)-box 14 [Source:ZFIN;Acc:ZDB-GENE-051113-268]
90. tfap2e ENSDARG00000008861 497 0.831 - - - - - - - - 0.831 transcription factor AP-2 epsilon [Source:ZFIN;Acc:ZDB-GENE-040426-1455]
91. cps1 ENSDARG00000020028 67 0.83 - - - - 0.830 - - - - carbamoyl-phosphate synthase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-081105-17]
92. drd3 ENSDARG00000032131, ENSDARG00000110679 25 0.83 - - - - - - - 0.830 - dopamine receptor D3 [Source:ZFIN;Acc:ZDB-GENE-021119-1]
93. foxp2 ENSDARG00000005453 1504 0.824 - - 0.824 - - - - - - forkhead box P2 [Source:ZFIN;Acc:ZDB-GENE-041203-2]
94. r3hdm1 ENSDARG00000101458 5241 0.824 - - - - - - - - 0.824 R3H domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7119]
95. piwil1 ENSDARG00000041699 21 0.824 - - - - 0.824 - - - - piwi-like RNA-mediated gene silencing 1 [Source:ZFIN;Acc:ZDB-GENE-030813-2]
96. BX511021.4 ENSDARG00000117436 4 0.824 - - - - 0.824 - - - -
97. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 0.824 - - - - - - - 0.824 - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
98. BX005472.1 BX005472.1 2 0.824 - - - - 0.824 - - - -
99. lhx2b ENSDARG00000031222 517 0.822 - - 0.822 - - - - - - LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-051220-1]
100. BX511021.2 ENSDARG00000097646 5 0.822 - - - - 0.822 - - - -

There are 197 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA