Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tbl1xr1b

Gene Name Gene ID Reads Annotation
tbl1xr1b ENSDARG00000008966 2203 transducin (beta)-like 1 X-linked receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1192]










Genes with expression patterns similar to tbl1xr1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tbl1xr1b ENSDARG00000008966 2203 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transducin (beta)-like 1 X-linked receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1192]
2. prkar1aa ENSDARG00000076128 6565 3.063 - 0.772 0.786 - - 0.802 - - 0.703 protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
3. sephs1 ENSDARG00000058292 3347 2.349 - 0.754 - - - - 0.827 - 0.768 selenophosphate synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3670]
4. FP085405.1 FP085405.1 5189 2.304 0.700 - 0.774 - - - 0.830 - -
5. eppk1 ENSDARG00000096359 4315 1.739 - 0.896 - - - 0.843 - - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
6. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.706 - - 0.862 0.844 - - - - - euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
7. aspm ENSDARG00000103754 5708 1.689 0.817 - - - - - 0.872 - - abnormal spindle microtubule assembly [Source:ZFIN;Acc:ZDB-GENE-050208-620]
8. si:dkeyp-13a3.10 ENSDARG00000092225 1054 1.669 - 0.886 - - - 0.783 - - - si:dkeyp-13a3.10 [Source:ZFIN;Acc:ZDB-GENE-070912-636]
9. hdac3 ENSDARG00000037514, ENSDARG00000110316 1985 1.662 - 0.761 - - - - 0.901 - - histone deacetylase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-847]
10. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.649 - 0.846 - - - 0.803 - - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
11. ptbp2a ENSDARG00000101947 1921 1.646 0.758 0.888 - - - - - - - polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
12. rab11al ENSDARG00000014340 2116 1.644 - 0.838 - - - 0.806 - - - RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
13. rassf6 ENSDARG00000000804 1090 1.636 - 0.764 - - - 0.872 - - - Ras association (RalGDS/AF-6) domain family 6 [Source:ZFIN;Acc:ZDB-GENE-030616-513]
14. itgb4 ENSDARG00000028507 2568 1.636 - 0.792 - - - 0.844 - - - integrin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7209]
15. sec13 ENSDARG00000054807, ENSDARG00000109318, ENSDARG00000110540 470 1.634 - 0.875 0.759 - - - - - - SEC13 homolog, nuclear pore and COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2649]
16. CABZ01083862.1 ENSDARG00000106989 779 1.63 - - 0.837 0.793 - - - - - zinc finger protein 821 [Source:NCBI gene;Acc:571740]
17. si:ch211-232i5.3 ENSDARG00000086874 1256 1.622 - 0.848 - - - 0.774 - - - si:ch211-232i5.3 [Source:ZFIN;Acc:ZDB-GENE-091204-88]
18. CABZ01003826.1_1 CABZ01003826.1_1 1154 1.616 - 0.825 0.791 - - - - - -
19. cercam ENSDARG00000079049, ENSDARG00000109573 2228 1.612 - 0.868 0.744 - - - - - - cerebral endothelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-030131-9787]
20. llgl1 ENSDARG00000009693 4205 1.606 - 0.747 - - - - 0.859 - - lethal giant larvae homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060825-69]
21. kdm4b ENSDARG00000099675 2037 1.598 - 0.853 - - - - - - 0.745 lysine (K)-specific demethylase 4B [Source:ZFIN;Acc:ZDB-GENE-060503-664]
22. slc30a1a ENSDARG00000005463 1011 1.592 - 0.856 0.736 - - - - - - solute carrier family 30 (zinc transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1840]
23. rnls ENSDARG00000012453 338 1.59 - 0.860 - 0.730 - - - - - renalase, FAD-dependent amine oxidase [Source:ZFIN;Acc:ZDB-GENE-040718-351]
24. pcnx 689 1.588 - 0.848 - - - - - - 0.740 pecanex homolog (Drosophila), transcript variant X5
25. caspb ENSDARG00000052039 4329 1.578 - 0.841 - - - 0.737 - - - caspase b [Source:ZFIN;Acc:ZDB-GENE-020812-1]
26. CCDC167 ENSDARG00000045850 1024 1.578 - - 0.752 - - - 0.826 - - coiled-coil domain containing 167 [Source:ZFIN;Acc:ZDB-GENE-041210-79]
27. afap1 ENSDARG00000055284 730 1.577 - 0.837 - - - 0.740 - - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
28. RAPGEFL1 ENSDARG00000079912 1074 1.575 - 0.847 - - - 0.728 - - - Rap guanine nucleotide exchange factor (GEF)-like 1 [Source:ZFIN;Acc:ZDB-GENE-131121-404]
29. hmg20a ENSDARG00000031198 1763 1.569 - - - - - - 0.864 - 0.705 high mobility group 20A [Source:ZFIN;Acc:ZDB-GENE-030131-5107]
30. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 1.569 - - 0.781 - - - 0.788 - - mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
31. cdc5l ENSDARG00000043797 985 1.564 - - 0.770 - - - 0.794 - - CDC5 cell division cycle 5-like (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-040426-821]
32. paip2b ENSDARG00000008706 4255 1.562 - - 0.822 - - - 0.740 - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
33. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 1.56 - 0.824 - - - 0.736 - - - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
34. prpf40a ENSDARG00000058467 6565 1.558 - - - - - - 0.836 - 0.722 PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
35. cdc42ep4a ENSDARG00000101457, ENSDARG00000114480 1226 1.557 - 0.717 - - - - 0.840 - - CDC42 effector protein (Rho GTPase binding) 4a [Source:ZFIN;Acc:ZDB-GENE-040704-22]
36. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.556 - - - - - - 0.807 - 0.749 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
37. rbm15b ENSDARG00000078966, ENSDARG00000112832 1888 1.551 - 0.797 - - - - 0.754 - - RNA binding motif protein 15B [Source:ZFIN;Acc:ZDB-GENE-080204-91]
38. hnrnpa1 hnrnpa1 1302 1.548 - 0.765 - - - - 0.783 - -
39. znf319 znf319 3027 1.548 - - - - - - 0.831 - 0.717
40. dnajc1 ENSDARG00000001940 2848 1.546 - 0.767 - - - - 0.779 - - DnaJ (Hsp40) homolog, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-061103-529]
41. marcksa ENSDARG00000004049 2518 1.544 - - 0.830 - - - - - 0.714 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
42. nr2f6a ENSDARG00000003607 4779 1.542 - - 0.720 - - - 0.822 - - nuclear receptor subfamily 2, group F, member 6a [Source:ZFIN;Acc:ZDB-GENE-030131-4362]
43. mdm4 ENSDARG00000057513 1954 1.541 - - 0.776 0.765 - - - - - MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
44. zeb1b ENSDARG00000013207, ENSDARG00000113922 2571 1.537 - - 0.796 - - - 0.741 - - zinc finger E-box binding homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010621-1]
45. ezh2 ENSDARG00000010571 3273 1.532 - - - - - - 0.772 - 0.760 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
46. pbx4 ENSDARG00000052150 35676 1.521 0.758 - - - - - 0.763 - - pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
47. xrn1 ENSDARG00000091652 2864 1.521 - - 0.796 - - - 0.725 - - 5'-3' exoribonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1203]
48. CASK CASK 1750 1.52 - - 0.778 - - - 0.742 - -
49. ccdc28a ENSDARG00000022983, ENSDARG00000091471 1449 1.519 - 0.801 - - - 0.718 - - - coiled-coil domain containing 28A [Source:ZFIN;Acc:ZDB-GENE-030131-5007]
50. vps72 1164 1.519 - - 0.807 0.712 - - - - - vacuolar protein sorting 72 homolog (S. cerevisiae)
51. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.514 - - - - - - 0.803 - 0.711 cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
52. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.513 - - - - - - 0.779 - 0.734 ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
53. hnrpl 6412 1.511 - - - - - - 0.748 - 0.763 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
54. rpa3 ENSDARG00000002613 2923 1.51 - 0.767 - - - - - - 0.743 replication protein A3 [Source:ZFIN;Acc:ZDB-GENE-040426-977]
55. bhlhe40 ENSDARG00000004060 2107 1.51 - 0.757 - - - 0.753 - - - basic helix-loop-helix family, member e40 [Source:ZFIN;Acc:ZDB-GENE-030131-3133]
56. stmn1a ENSDARG00000004169 21169 1.51 - - - - - - 0.809 - 0.701 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
57. fen1 ENSDARG00000011404 3358 1.509 - - - - - - 0.809 - 0.700 flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
58. lama5 ENSDARG00000058543 2782 1.507 - - 0.732 - - 0.775 - - - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
59. tnpo2 ENSDARG00000038239 2469 1.507 - - 0.773 - - - - - 0.734 transportin 2 (importin 3, karyopherin beta 2b) [Source:ZFIN;Acc:ZDB-GENE-040822-16]
60. hnrnpub ENSDARG00000004735 16496 1.507 - - - - - - 0.744 - 0.763 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
61. calm1a ENSDARG00000021811 4791 1.506 - - 0.707 - - - 0.799 - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
62. ap3s2 ENSDARG00000039882 2149 1.505 - 0.759 - - - - - - 0.746 adaptor related protein complex 3 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-040718-274]
63. coa3 coa3 1423 1.505 - 0.752 - - - - 0.753 - -
64. top2a ENSDARG00000024488 4273 1.5 - - 0.774 - - - - - 0.726 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
65. inip ENSDARG00000028523 1925 1.498 - - - - - - 0.752 - 0.746 ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
66. rfc1 ENSDARG00000054799 1416 1.493 - - - 0.778 - - 0.715 - - replication factor C (activator 1) 1 [Source:ZFIN;Acc:ZDB-GENE-070410-99]
67. ncaph ENSDARG00000061468, ENSDARG00000113773 1401 1.492 - - - - - - 0.765 - 0.727 non-SMC condensin I complex, subunit H [Source:ZFIN;Acc:ZDB-GENE-070112-652]
68. nkap ENSDARG00000033450, ENSDARG00000116152 1929 1.492 - - 0.744 - - 0.748 - - - NFKB activating protein [Source:ZFIN;Acc:ZDB-GENE-030131-8064]
69. psmb7 ENSDARG00000037962 11542 1.486 - - - - - - 0.749 - 0.737 proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
70. smek1 ENSDARG00000042187 3509 1.484 - - - - - 0.713 - - 0.771 SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
71. elof1 ENSDARG00000099453 6176 1.483 - - - 0.706 - - 0.777 - - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
72. cited4b ENSDARG00000101009, ENSDARG00000114241 3632 1.481 - - - - - - 0.741 - 0.740 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4b [Source:ZFIN;Acc:ZDB-GENE-030425-5]
73. supt6h ENSDARG00000006524 3221 1.479 - - 0.754 - - - 0.725 - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
74. lhfp 700 1.476 - - 0.758 - - - 0.718 - - lipoma HMGIC fusion partner
75. arl4d ENSDARG00000045074, ENSDARG00000114046 2237 1.476 - 0.706 0.770 - - - - - - ADP-ribosylation factor-like 4D [Source:ZFIN;Acc:ZDB-GENE-030131-2293]
76. setd8b 2528 1.474 - 0.746 - - - 0.728 - - - SET domain containing (lysine methyltransferase) 8b
77. CR388231.3 ENSDARG00000105601 2404 1.473 - - - - - - 0.737 - 0.736
78. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 1.472 - - - - - 0.701 0.771 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
79. rap1a rap1a 5654 1.472 - 0.731 - - - - 0.741 - -
80. TRIP10 TRIP10 1079 1.471 - - 0.746 - - 0.725 - - -
81. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 1.468 - - - - - - 0.760 - 0.708 structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
82. fam46c 1913 1.467 - - 0.730 - - - 0.737 - - family with sequence similarity 46, member C
83. snrpa ENSDARG00000018890 4593 1.463 - - - - - - 0.760 - 0.703 small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
84. pabpn1 ENSDARG00000045373 4876 1.459 - - - - - 0.715 0.744 - - poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
85. snrpd3l ENSDARG00000076283 7655 1.457 - - - - - - 0.744 - 0.713 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
86. arhgap29b ENSDARG00000017748 812 1.456 - - 0.747 - - 0.709 - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
87. klf15 ENSDARG00000091127 1037 1.452 - - 0.707 - - 0.745 - - - Kruppel-like factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-7844]
88. parp16 ENSDARG00000018593 873 1.45 - - 0.738 - - - 0.712 - - poly (ADP-ribose) polymerase family, member 16 [Source:ZFIN;Acc:ZDB-GENE-040426-2289]
89. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.449 - - - - - - 0.715 - 0.734 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
90. ccnl1b ENSDARG00000012140 1639 1.449 - - - - - - 0.749 - 0.700 cyclin L1b [Source:ZFIN;Acc:ZDB-GENE-030131-4813]
91. TAF15 ENSDARG00000070019 5102 1.448 - - - - - - 0.722 - 0.726 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
92. sbf1 ENSDARG00000062968, ENSDARG00000111535 1287 1.446 - - - 0.706 - - 0.740 - - SET binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-139]
93. ptbp1b ENSDARG00000031907, ENSDARG00000115714 3808 1.441 - - 0.733 - - 0.708 - - - polypyrimidine tract binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9796]
94. apex1 ENSDARG00000045843 6345 1.44 - - - 0.708 - - 0.732 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
95. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.44 - - - - - - 0.727 - 0.713 PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
96. srsf2b ENSDARG00000103893 1437 1.439 - 0.728 - - - - 0.711 - - serine/arginine-rich splicing factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2420]
97. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.439 - 0.724 - - - - 0.715 - - high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
98. sik2b ENSDARG00000062315 1303 1.433 - 0.721 - - - - 0.712 - - salt-inducible kinase 2b [Source:ZFIN;Acc:ZDB-GENE-071012-1]
99. cdk6 ENSDARG00000070228 1778 1.431 - - - - - - 0.710 - 0.721 cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
100. ppdpfa ENSDARG00000007682 3214 1.428 - 0.727 - - - 0.701 - - - pancreatic progenitor cell differentiation and proliferation factor a [Source:ZFIN;Acc:ZDB-GENE-030219-204]

There are 1468 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA