Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tbc1d1

Gene Name Gene ID Reads Annotation
tbc1d1 ENSDARG00000062081, ENSDARG00000109222 1592 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060710-1]










Genes with expression patterns similar to tbc1d1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tbc1d1 ENSDARG00000062081, ENSDARG00000109222 1592 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060710-1]
2. oclna ENSDARG00000005108 3280 2.466 - 0.855 - - - 0.847 0.764 - - occludin a [Source:ZFIN;Acc:ZDB-GENE-040426-2685]
3. suco ENSDARG00000016532 1609 2.408 - - - 0.728 - - 0.744 0.936 - SUN domain containing ossification factor [Source:ZFIN;Acc:ZDB-GENE-030131-2941]
4. nme3 ENSDARG00000100990 3889 2.399 - - - - - 0.763 0.765 0.871 - NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
5. pi4k2a ENSDARG00000033666 1257 2.319 - - - 0.711 - 0.894 0.714 - - phosphatidylinositol 4-kinase type 2 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2675]
6. zgc:100868 ENSDARG00000004748 2582 1.739 - - - - - 0.912 0.827 - - zgc:100868 [Source:ZFIN;Acc:ZDB-GENE-040801-33]
7. PCOLCE_1 PCOLCE_1 2148 1.708 - 0.841 - - - 0.867 - - -
8. gna12a ENSDARG00000025826 1769 1.696 - - - - - 0.837 0.859 - - guanine nucleotide binding protein (G protein) alpha 12a [Source:ZFIN;Acc:ZDB-GENE-050221-1]
9. FBXL3 FBXL3 1769 1.695 - - - 0.764 - - - 0.931 -
10. eef1a1a ENSDARG00000039502 234 1.68 - - - 0.737 - - - 0.943 - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
11. SLC12A7 SLC12A7 1702 1.666 - - - - - 0.755 - 0.911 -
12. nek7 ENSDARG00000056966 816 1.66 - - - - - 0.798 0.862 - - NIMA-related kinase 7 [Source:ZFIN;Acc:ZDB-GENE-040801-136]
13. ube2z ENSDARG00000029215 1059 1.658 - - - 0.737 - - - 0.921 - ubiquitin-conjugating enzyme E2Z [Source:ZFIN;Acc:ZDB-GENE-040718-15]
14. ccz1 ENSDARG00000056559, ENSDARG00000109877 2629 1.647 - 0.721 - - - - - 0.926 - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:ZFIN;Acc:ZDB-GENE-040426-698]
15. nt5c2a ENSDARG00000039399 3062 1.646 - 0.746 - - - - - 0.900 - 5'-nucleotidase, cytosolic IIa [Source:ZFIN;Acc:ZDB-GENE-030131-3566]
16. atp6v1d ENSDARG00000011175 8331 1.644 - - - - - 0.711 - 0.933 - ATPase H+ transporting V1 subunit D [Source:ZFIN;Acc:ZDB-GENE-040426-727]
17. mthfd1b ENSDARG00000040492 3784 1.643 - - - - - 0.896 0.747 - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b [Source:ZFIN;Acc:ZDB-GENE-020905-4]
18. gnmt ENSDARG00000006840 2422 1.632 - - - - - 0.806 0.826 - - glycine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040227-1]
19. CIDEC ENSDARG00000059651, ENSDARG00000110335 418 1.629 - - - - - 0.838 0.791 - - cell death-inducing DFFA-like effector c [Source:ZFIN;Acc:ZDB-GENE-030131-4591]
20. rab5aa ENSDARG00000018602 8947 1.624 - - - - - 0.708 - 0.916 - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
21. creb3l3l ENSDARG00000020926, ENSDARG00000116217 1458 1.624 - - - - - 0.727 - 0.897 - cAMP responsive element binding protein 3-like 3 like [Source:ZFIN;Acc:ZDB-GENE-040426-2942]
22. CGREF1 ENSDARG00000075444 397 1.619 - - - - - 0.764 0.855 - - cell growth regulator with EF-hand domain 1 [Source:ZFIN;Acc:ZDB-GENE-131121-137]
23. si:ch211-209n20.57 si:ch211-209n20.57 1188 1.616 - - - - - 0.707 - 0.909 -
24. igf2r ENSDARG00000006094 1578 1.612 - - - - - 0.794 0.818 - - insulin-like growth factor 2 receptor [Source:ZFIN;Acc:ZDB-GENE-041014-300]
25. cacybp ENSDARG00000014731 2650 1.612 - 0.819 - - - - 0.793 - - calcyclin binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-2579]
26. mtp_1 3298 1.6 - 0.817 - - - 0.783 - - - microsomal triglyceride transfer protein
27. fn1b ENSDARG00000006526 9542 1.599 - 0.817 - - - 0.782 - - - fibronectin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6545]
28. slc47a1 ENSDARG00000046012 1426 1.598 - - - - - 0.870 0.728 - - solute carrier family 47 (multidrug and toxin extrusion), member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-20]
29. g6pca.2 ENSDARG00000013721 2034 1.591 - 0.782 - - - 0.809 - - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050309-17]
30. gna11b ENSDARG00000053326 5118 1.59 - 0.749 - - - - - 0.841 - guanine nucleotide binding protein (G protein), alpha 11b (Gq class) [Source:ZFIN;Acc:ZDB-GENE-041121-9]
31. furina ENSDARG00000062909, ENSDARG00000117158 6313 1.588 - - - - - 0.868 0.720 - - furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
32. RNF145_1 RNF145_1 835 1.587 - - - - - 0.761 0.826 - -
33. MPC2 ENSDARG00000024478 4194 1.585 - - - - - 0.812 0.773 - - mitochondrial pyruvate carrier 2 [Source:ZFIN;Acc:ZDB-GENE-030131-330]
34. ctsll ENSDARG00000011701, ENSDARG00000112885 6970 1.584 - - - - - 0.831 0.753 - - cathepsin L, like [Source:ZFIN;Acc:ZDB-GENE-041010-76]
35. epdl2 ENSDARG00000055539 1895 1.581 - 0.700 - - - 0.881 - - - ependymin-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-250]
36. ctsh ENSDARG00000041108 2873 1.579 - - - - - 0.826 0.753 - - cathepsin H [Source:ZFIN;Acc:ZDB-GENE-030131-3539]
37. wbp1lb ENSDARG00000029751 1072 1.578 - - - - - 0.779 0.799 - - WW domain binding protein 1-like b [Source:ZFIN;Acc:ZDB-GENE-050522-112]
38. mctp2a ENSDARG00000001414 307 1.567 - - - 0.749 - - 0.818 - - multiple C2 domains, transmembrane 2a [Source:ZFIN;Acc:ZDB-GENE-040724-63]
39. tmem110l ENSDARG00000045518 1783 1.566 - - - - - 0.853 0.713 - - transmembrane protein 110, like [Source:ZFIN;Acc:ZDB-GENE-040426-912]
40. cyp2aa3 ENSDARG00000103347 880 1.564 - - - - - 0.858 0.706 - - cytochrome P450, family 2, subfamily AA, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-031030-8]
41. tbx3a ENSDARG00000002216 2270 1.564 - - - - - 0.762 0.802 - - T-box 3a [Source:ZFIN;Acc:ZDB-GENE-070209-80]
42. CABZ01062452.1 CABZ01062452.1 1721 1.563 - - - 0.763 - - 0.800 - -
43. zgc:152830 ENSDARG00000079932 12194 1.563 - - - - - 0.849 0.714 - - zgc:152830 [Source:ZFIN;Acc:ZDB-GENE-090312-55]
44. cfd ENSDARG00000039579, ENSDARG00000110892, ENSDARG00000115542 670 1.561 - 0.757 - - - 0.804 - - - complement factor D (adipsin) [Source:ZFIN;Acc:ZDB-GENE-050522-411]
45. fdps ENSDARG00000040890 4000 1.559 - 0.776 - - - 0.783 - - - farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) [Source:ZFIN;Acc:ZDB-GENE-050506-78]
46. mdm2 ENSDARG00000033443, ENSDARG00000115677 2480 1.557 - - - - - 0.816 0.741 - - MDM2 oncogene, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-990415-153]
47. fn1 fn1 2538 1.555 - 0.760 - - - 0.795 - - -
48. lamp2 ENSDARG00000014914 5035 1.552 - - - - - 0.802 0.750 - - lysosomal-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030729-9]
49. APOB_1 APOB_1 2217 1.551 - 0.801 - - - 0.750 - - -
50. frem2b ENSDARG00000102626 1416 1.548 - - - - - 0.711 0.837 - - Fras1 related extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-081119-4]
51. si:ch211-105c13.3 ENSDARG00000089441 13973 1.548 - 0.782 - - - - 0.766 - - si:ch211-105c13.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4483]
52. TBC1D24 ENSDARG00000069339 1300 1.547 - - - 0.729 - - 0.818 - - TBC1 domain family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050809-65]
53. ufm1 ENSDARG00000043857 4152 1.54 - 0.707 - - - - - 0.833 - ubiquitin-fold modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2930]
54. ppp1r13l ENSDARG00000013777 2260 1.531 - - - - - 0.826 0.705 - - protein phosphatase 1, regulatory subunit 13 like [Source:ZFIN;Acc:ZDB-GENE-050327-33]
55. zgc:92360 ENSDARG00000038151 2161 1.53 - 0.804 - - - 0.726 - - - zgc:92360 [Source:ZFIN;Acc:ZDB-GENE-040718-470]
56. slu7 ENSDARG00000038870 1311 1.53 - - - - - 0.809 0.721 - - SLU7 homolog, splicing factor [Source:ZFIN;Acc:ZDB-GENE-041114-62]
57. smcr7b smcr7b 690 1.527 - 0.800 - 0.727 - - - - -
58. gbp1 ENSDARG00000038668 520 1.526 - 0.728 - - - - 0.798 - - guanylate binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040718-32]
59. si:dkeyp-89c11.2 si:dkeyp-89c11.2 683 1.524 - - - - - 0.739 0.785 - -
60. snx10a ENSDARG00000004405 329 1.524 - 0.790 - - - 0.734 - - - sorting nexin 10a [Source:ZFIN;Acc:ZDB-GENE-050809-44]
61. cmtm6 ENSDARG00000099631 641 1.521 - - - 0.768 - - 0.753 - - CKLF-like MARVEL transmembrane domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030729-15]
62. dgat2 ENSDARG00000018846 5032 1.52 - - - - - 0.765 0.755 - - diacylglycerol O-acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-15]
63. fam3c ENSDARG00000056152 3833 1.519 - - - 0.701 - - - 0.818 - family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
64. serpina1l ENSDARG00000090850 10625 1.518 - - - - - 0.791 0.727 - - serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1, like [Source:ZFIN;Acc:ZDB-GENE-040721-3]
65. bsg ENSDARG00000019881 11894 1.518 - - - - - 0.801 0.717 - - basigin [Source:ZFIN;Acc:ZDB-GENE-030131-9638]
66. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.515 - 0.720 - - - 0.795 - - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
67. arhgef18a ENSDARG00000011157 1702 1.515 - - - - - 0.734 0.781 - - rho/rac guanine nucleotide exchange factor (GEF) 18a [Source:ZFIN;Acc:ZDB-GENE-040516-14]
68. amotl2a ENSDARG00000061923 4713 1.506 - 0.728 - - - - 0.778 - - angiomotin like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9770]
69. dio3b ENSDARG00000095767 521 1.505 - - - 0.774 - 0.731 - - - iodothyronine deiodinase 3b [Source:NCBI gene;Acc:798872]
70. nck1a ENSDARG00000074262 833 1.503 - - - - - 0.781 0.722 - - NCK adaptor protein 1a [Source:ZFIN;Acc:ZDB-GENE-070912-547]
71. crp4 714 1.503 - - - 0.742 - - 0.761 - - C-reactive protein 4
72. svilb ENSDARG00000014651 4449 1.502 - 0.713 - - - 0.789 - - - supervillin b [Source:ZFIN;Acc:ZDB-GENE-081104-411]
73. APOA4_1 APOA4_1 3645 1.502 - - - - - 0.766 0.736 - -
74. rpe ENSDARG00000005251, ENSDARG00000117024 3865 1.499 - - - - - 0.778 0.721 - - ribulose-5-phosphate-3-epimerase [Source:ZFIN;Acc:ZDB-GENE-030131-6837]
75. sb:cb37 ENSDARG00000041645 2018 1.498 - - - - - 0.743 0.755 - - sb:cb37 [Source:ZFIN;Acc:ZDB-GENE-030131-9800]
76. MYO1D ENSDARG00000036863 768 1.497 - - - - - 0.755 0.742 - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
77. CNDP1 CNDP1 6456 1.494 - - - - - 0.785 0.709 - -
78. scamp2 ENSDARG00000010279 2325 1.493 - 0.701 - - - - 0.792 - - secretory carrier membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2702]
79. yipf2 ENSDARG00000021399 702 1.49 - 0.715 - - - 0.775 - - - Yip1 domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040724-124]
80. TMEM71 TMEM71 696 1.489 - - - - - 0.724 0.765 - -
81. aqp11 ENSDARG00000100555 983 1.488 - 0.772 - - - 0.716 - - - aquaporin 11 [Source:ZFIN;Acc:ZDB-GENE-080418-1]
82. bambib ENSDARG00000099677 4267 1.485 - - - 0.784 - 0.701 - - - BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) b [Source:ZFIN;Acc:ZDB-GENE-040704-30]
83. erbb3a ENSDARG00000006202 903 1.48 - - - - - 0.746 0.734 - - erb-b2 receptor tyrosine kinase 3a [Source:ZFIN;Acc:ZDB-GENE-030916-3]
84. ube2c ENSDARG00000101618, ENSDARG00000114670 5271 1.476 - - - - - 0.736 - 0.740 - ubiquitin-conjugating enzyme E2C [Source:ZFIN;Acc:ZDB-GENE-051030-48]
85. dpydb ENSDARG00000010267 831 1.472 - - - - - 0.760 0.712 - - dihydropyrimidine dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-040426-2459]
86. CU469577.1 ENSDARG00000102850 1232 1.469 - 0.767 - - - 0.702 - - -
87. ctsla ENSDARG00000007836 67814 1.461 - - - - - 0.754 0.707 - - cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
88. slc26a5 ENSDARG00000022424 976 1.461 - 0.739 - - - 0.722 - - - solute carrier family 26 (anion exchanger), member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1566]
89. sidt2 ENSDARG00000045976 1997 1.46 - 0.747 - - - - 0.713 - - SID1 transmembrane family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7356]
90. epas1a ENSDARG00000008697 3225 1.452 - - - - - 0.741 0.711 - - endothelial PAS domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4490]
91. asrgl1 ENSDARG00000021681 530 1.444 - - - - - 0.741 0.703 - - asparaginase like 1 [Source:ZFIN;Acc:ZDB-GENE-050320-102]
92. igfbp2a ENSDARG00000052470, ENSDARG00000111105 1939 1.444 - 0.700 - - - - 0.744 - - insulin-like growth factor binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-000125-12]
93. serpind1 ENSDARG00000021208 665 1.442 - - - - - 0.715 0.727 - - serpin peptidase inhibitor, clade D (heparin cofactor), member 1 [Source:ZFIN;Acc:ZDB-GENE-030711-2]
94. gnpda1 ENSDARG00000037307, ENSDARG00000109317, ENSDARG00000114846 2191 1.439 - - - - - 0.712 0.727 - - glucosamine-6-phosphate deaminase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-417]
95. micu2 ENSDARG00000009939 557 1.431 - 0.720 - - - - 0.711 - - mitochondrial calcium uptake 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3374]
96. cask cask 3384 1.431 - - - - - 0.730 0.701 - -
97. rrbp1b ENSDARG00000041703, ENSDARG00000115474 4598 1.428 - - - - - 0.713 0.715 - - ribosome binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030429-36]
98. wasf2 ENSDARG00000024209 5338 1.427 - 0.710 - - - 0.717 - - - WAS protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-865]
99. mafbb ENSDARG00000070542, ENSDARG00000099120 1317 1.427 - 0.700 - - - 0.727 - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Bb [Source:ZFIN;Acc:ZDB-GENE-010605-4]
100. dpp7 ENSDARG00000027750, ENSDARG00000112154, ENSDARG00000115933 2341 1.422 - - - 0.715 - - 0.707 - - dipeptidyl-peptidase 7 [Source:ZFIN;Acc:ZDB-GENE-050306-16]

There are 1322 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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