Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tardbp

Gene Name Gene ID Reads Annotation
tardbp ENSDARG00000040031, ENSDARG00000115667 13815 TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]










Genes with expression patterns similar to tardbp

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]
2. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 3.333 - - 0.763 0.733 - 0.930 0.907 - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
3. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 2.596 - - - - - 0.931 0.791 - 0.874 F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
4. marcksa ENSDARG00000004049 2518 2.524 - - - 0.900 - - 0.853 0.771 - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
5. eif4h ENSDARG00000042252 6742 2.503 - - 0.853 0.860 - - 0.790 - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
6. dnajc5ab ENSDARG00000004836 2923 2.487 - - 0.706 0.827 - 0.954 - - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
7. insm1a ENSDARG00000091756 1838 2.483 - - - 0.804 - 0.941 0.738 - - insulinoma-associated 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1810]
8. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 2.46 - - - - - - 0.783 0.754 0.923 serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
9. ttk ENSDARG00000041361 3911 2.421 - - 0.772 0.865 - - 0.784 - - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
10. ephb3a ENSDARG00000031548 1872 2.392 - - - 0.800 0.873 - 0.719 - - eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
11. tdg tdg 3269 2.389 - - - 0.816 - - 0.777 0.796 -
12. stmn1a ENSDARG00000004169 21169 2.383 - - 0.719 - - 0.917 0.747 - - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
13. UBE2QL1 ENSDARG00000079276 3474 2.382 - - - 0.792 - - 0.830 0.760 - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
14. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.369 - - 0.705 - - - 0.865 0.799 - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
15. gpm6bb ENSDARG00000001676 2005 2.363 - - 0.752 0.893 - - 0.718 - - glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
16. ZFHX3 ENSDARG00000103057 7759 2.325 - - - 0.851 - - 0.772 0.702 - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
17. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 2.319 - - 0.789 0.710 - - 0.820 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
18. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 2.314 - - 0.722 0.875 - - 0.717 - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
19. zswim5 ENSDARG00000055900 4243 2.313 0.731 - 0.796 - - - 0.786 - - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
20. ZNF281 ZNF281 1946 2.302 - - - 0.799 - - 0.731 0.772 -
21. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.298 - - - 0.734 0.856 - 0.708 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
22. pou3f3a ENSDARG00000042032 2835 2.291 - - 0.776 0.734 - - 0.781 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
23. st18 663 2.281 - - - 0.830 - - 0.748 0.703 - suppression of tumorigenicity 18, zinc finger
24. prpf8 ENSDARG00000026180 7026 2.276 0.709 - - 0.817 - - - 0.750 - pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
25. mex3b ENSDARG00000058369 1867 2.249 - - - 0.713 - - 0.793 0.743 - mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
26. clvs2 ENSDARG00000053122 1390 2.15 - - - 0.717 - - 0.730 0.703 - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
27. osgn1 ENSDARG00000052279 5607 1.84 - - - - - 0.916 - - 0.924 oxidative stress induced growth inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-864]
28. zgc:77262 ENSDARG00000044545 5563 1.83 - - - - - 0.952 0.878 - - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
29. kdm1a ENSDARG00000060679 6152 1.817 - - - - - 0.954 0.863 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
30. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.81 - - - - - 0.944 0.866 - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
31. mxi1 ENSDARG00000040884, ENSDARG00000111950 3239 1.794 - - - - - 0.950 0.844 - - max interactor 1, dimerization protein [Source:ZFIN;Acc:ZDB-GENE-990415-151]
32. wu:fk48d07 wu:fk48d07 13245 1.792 - - - - 0.867 0.925 - - -
33. wu:fq41a10 wu:fq41a10 7009 1.789 - - - - - 0.969 0.820 - -
34. plagx ENSDARG00000036855 3768 1.775 - - - 0.913 - - 0.862 - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
35. igbp1 ENSDARG00000002184, ENSDARG00000117141 879 1.773 - - - 0.856 - 0.917 - - - immunoglobulin (CD79A) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2928]
36. TNRC6A ENSDARG00000079688 14433 1.761 - - - - 0.882 - 0.879 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
37. mdkb ENSDARG00000020708 5393 1.74 - - - 0.922 - - 0.818 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
38. ddx39ab ENSDARG00000015111 11619 1.739 - - 0.858 - - - 0.881 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
39. mier1a ENSDARG00000041072 1690 1.726 - - - 0.800 - 0.926 - - - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
40. cltca ENSDARG00000043493, ENSDARG00000115370 12561 1.721 - - 0.764 - - 0.957 - - - clathrin, heavy chain a (Hc) [Source:ZFIN;Acc:ZDB-GENE-030131-2299]
41. ITCH ITCH 1226 1.72 - - - 0.776 - 0.944 - - -
42. TTYH3 TTYH3 1841 1.717 - - - 0.790 - 0.927 - - -
43. axin2 ENSDARG00000100149 4223 1.716 - - 0.770 - - 0.946 - - - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
44. rpl17 ENSDARG00000057556 60281 1.714 - - - - - 0.819 - - 0.895 ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]
45. mrps23 ENSDARG00000033973 2265 1.713 - - - - - 0.946 0.767 - - mitochondrial ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-040801-134]
46. sulf2l sulf2l 4980 1.707 - - - - - 0.934 0.773 - -
47. ktn1 ENSDARG00000032802 6251 1.705 - - - - - 0.915 0.790 - - kinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
48. SERBP1 SERBP1 9276 1.703 - - 0.807 - - - 0.896 - -
49. g3bp1 ENSDARG00000017741 7622 1.699 - - - - 0.861 - 0.838 - - GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
50. txnl4a ENSDARG00000036190 2048 1.697 - - - - - 0.928 0.769 - - thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
51. robo3 ENSDARG00000005645 2818 1.697 - - - - - 0.980 0.717 - - roundabout, axon guidance receptor, homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000209-4]
52. mmgt1 ENSDARG00000010553, ENSDARG00000109407 2992 1.695 - - - 0.771 - 0.924 - - - membrane magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-040801-65]
53. mau2 ENSDARG00000042056 2378 1.694 - - - - - 0.929 0.765 - - MAU2 sister chromatid cohesion factor [Source:ZFIN;Acc:ZDB-GENE-050522-383]
54. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 1.692 - - - 0.904 - - 0.788 - - structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
55. pbx4 ENSDARG00000052150 35676 1.692 - - - - 0.843 - 0.849 - - pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
56. cux1a ENSDARG00000078459 3914 1.691 - - - - - 0.966 0.725 - - cut-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5868]
57. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.689 - - - 0.871 - - 0.818 - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
58. hnrnpub ENSDARG00000004735 16496 1.687 - - - 0.790 - - 0.897 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
59. lypla2 ENSDARG00000053656 8971 1.682 - - 0.820 - - - 0.862 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
60. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.679 - - - 0.848 - - 0.831 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
61. cacybp ENSDARG00000014731 2650 1.669 - - - 0.734 - 0.935 - - - calcyclin binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-2579]
62. eif3s6ip ENSDARG00000101082 18515 1.668 0.762 - - - - 0.906 - - - eukaryotic translation initiation factor 3, subunit 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2138]
63. NELL2A ENSDARG00000090690 840 1.666 - - - - - 0.950 0.716 - - neural EGFL like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7972]
64. LANCL2 ENSDARG00000045465 1221 1.661 - - - 0.866 - - 0.795 - - LanC lantibiotic synthetase component C-like 2 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-070209-191]
65. eif4g3b ENSDARG00000074331, ENSDARG00000116386 1155 1.66 - - - 0.735 - 0.925 - - - eukaryotic translation initiation factor 4 gamma, 3b [Source:ZFIN;Acc:ZDB-GENE-090312-49]
66. PHYHIP ENSDARG00000116497 456 1.658 - - - - - 0.922 0.736 - - phytanoyl-CoA 2-hydroxylase interacting protein [Source:NCBI gene;Acc:100002455]
67. smarce1 ENSDARG00000016871 9628 1.655 - - - - - - 0.832 0.823 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
68. tmem198a ENSDARG00000042115 1694 1.654 - - - - - - 0.833 0.821 - transmembrane protein 198a [Source:ZFIN;Acc:ZDB-GENE-070912-716]
69. h3f3a 66671 1.653 - - - - - - 0.863 0.790 - H3 histone, family 3A, transcript variant X1
70. cand1 ENSDARG00000017841 8164 1.653 - - 0.878 0.775 - - - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
71. gipc1 ENSDARG00000104483 2913 1.652 - - - 0.845 - - 0.807 - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
72. fh ENSDARG00000075132 1340 1.65 - - - - - 0.942 0.708 - - fumarate hydratase [Source:ZFIN;Acc:ZDB-GENE-010724-6]
73. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.648 - - - - - - 0.724 - 0.924 one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
74. zgc:92664 ENSDARG00000015161 1651 1.646 - - - 0.771 - - - 0.875 - zgc:92664 [Source:ZFIN;Acc:ZDB-GENE-040718-119]
75. oaz1b ENSDARG00000104782 37623 1.646 - - 0.795 - - 0.851 - - - ornithine decarboxylase antizyme 1b [Source:ZFIN;Acc:ZDB-GENE-020731-5]
76. srsf2a ENSDARG00000057484 25721 1.646 - - - 0.731 - 0.915 - - - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
77. hmgb3a ENSDARG00000056725 15668 1.645 0.722 - - - - - 0.923 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
78. tmeff1b ENSDARG00000056740 11253 1.641 - - - 0.858 - - 0.783 - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
79. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.641 - - - 0.789 - - 0.852 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
80. ppp2r1b ppp2r1b 3469 1.64 0.796 - - 0.844 - - - - -
81. meis2b ENSDARG00000077840 5166 1.638 - - - 0.836 - - 0.802 - - Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
82. dut ENSDARG00000106529 3120 1.638 - - 0.825 - - - 0.813 - - deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
83. ctnnb1 ENSDARG00000014571 12004 1.636 - - - - - - - 0.714 0.922 catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
84. anp32e ENSDARG00000054804 11017 1.635 - - 0.852 - - - 0.783 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
85. LDLRAD4 LDLRAD4 1237 1.631 - - - 0.836 - - 0.795 - -
86. pfn2l ENSDARG00000012682 21690 1.63 - - - 0.781 - - 0.849 - - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
87. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.629 - - - 0.740 - - 0.889 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
88. ilf3b ENSDARG00000105177 9473 1.629 - - - - - - 0.830 0.799 - interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]
89. cnot6l ENSDARG00000054597, ENSDARG00000112672 1586 1.62 - - - - - 0.885 0.735 - - CCR4-NOT transcription complex, subunit 6-like [Source:ZFIN;Acc:ZDB-GENE-050522-302]
90. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 1.62 - - - 0.830 - - 0.790 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
91. hnrnpk ENSDARG00000018914 8841 1.618 - - 0.871 - - - 0.747 - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
92. h2afva ENSDARG00000068820 16427 1.617 - - - - - - 0.905 0.712 - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
93. drg1 ENSDARG00000039345 7545 1.617 - - 0.844 - - - 0.773 - - developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
94. hnrnpr ENSDARG00000014569 3423 1.616 - - 0.779 - - - 0.837 - - heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]
95. abce1 ENSDARG00000007216 7502 1.614 - - - - 0.869 - 0.745 - - ATP-binding cassette, sub-family E (OABP), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1995]
96. hif1an ENSDARG00000031915 2098 1.612 - - - 0.848 - - 0.764 - - hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
97. ubr5 ENSDARG00000018192 9267 1.61 - - - - - - 0.790 0.820 - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
98. si:dkey-42i9.4 ENSDARG00000008049 4752 1.609 - - - - - - 0.760 0.849 - si:dkey-42i9.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8398]
99. acin1a ENSDARG00000054290 14023 1.607 - - - - 0.857 - 0.750 - - apoptotic chromatin condensation inducer 1a [Source:ZFIN;Acc:ZDB-GENE-030616-583]
100. huwe1 ENSDARG00000016782 6493 1.601 - - - 0.708 - - - - 0.893 HECT, UBA and WWE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-387]

There are 1873 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA