Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for taf3

Gene Name Gene ID Reads Annotation
taf3 ENSDARG00000045513 1819 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto [Source:ZFIN;Acc:ZDB-GENE-030131-6406]










Genes with expression patterns similar to taf3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. taf3 ENSDARG00000045513 1819 8 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto [Source:ZFIN;Acc:ZDB-GENE-030131-6406]
2. blcap ENSDARG00000052073 8646 2.306 - 0.824 - - - 0.705 0.777 - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
3. TNRC6A ENSDARG00000079688 14433 2.287 - 0.794 0.738 - - - 0.755 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
4. MAP4_1 MAP4_1 1153 1.932 - 0.986 - - - - - - 0.946
5. nf2b ENSDARG00000025567 1441 1.906 - 0.985 - - - - - - 0.921 neurofibromin 2b (merlin) [Source:ZFIN;Acc:ZDB-GENE-040622-3]
6. si:ch73-91k6.2 ENSDARG00000091598 727 1.88 - 0.948 - - - - - - 0.932 si:ch73-91k6.2 [Source:ZFIN;Acc:ZDB-GENE-050208-270]
7. srp68 ENSDARG00000020820 1719 1.851 - 0.950 - - - - - - 0.901 signal recognition particle 68 [Source:ZFIN;Acc:ZDB-GENE-040831-3]
8. rab14 ENSDARG00000074246 4084 1.814 - 0.978 - - - - 0.836 - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
9. chst11 ENSDARG00000034375 2701 1.805 - 0.957 - - - - - - 0.848 carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
10. otud5b ENSDARG00000056840, ENSDARG00000114052 2199 1.796 - 0.966 - - - - - - 0.830 OTU deubiquitinase 5b [Source:ZFIN;Acc:ZDB-GENE-040801-50]
11. PFKL_1 PFKL_1 298 1.773 - - - - - 0.835 - - 0.938
12. zgc:65772 zgc:65772 2092 1.755 - - - - - - 0.841 - 0.914
13. si:dkey-117n7.3 ENSDARG00000092944 2518 1.748 - 0.893 - - - - - - 0.855 si:dkey-117n7.3 [Source:ZFIN;Acc:ZDB-GENE-060503-143]
14. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.743 - 0.957 - - - - 0.786 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
15. nusap1 ENSDARG00000002403 6953 1.741 - 0.977 - - - - 0.764 - - nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
16. hoxc8a ENSDARG00000070346 4252 1.734 - 0.943 - - - - 0.791 - - homeobox C8a [Source:ZFIN;Acc:ZDB-GENE-990415-114]
17. meis3 ENSDARG00000002795 2509 1.73 - 0.957 - - - - 0.773 - - myeloid ecotropic viral integration site 3 [Source:ZFIN;Acc:ZDB-GENE-010406-2]
18. zgc:112175 ENSDARG00000037810 402 1.728 - - - - - 0.791 - - 0.937 zgc:112175 [Source:ZFIN;Acc:ZDB-GENE-050417-220]
19. tars ENSDARG00000013250, ENSDARG00000110996, ENSDARG00000113759 4599 1.728 - 0.955 - - - - - - 0.773 threonyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-041010-218]
20. prkrira 971 1.723 - - - - - - 0.785 - 0.938 protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) a
21. prkcsh ENSDARG00000004470 1424 1.719 - - - - - - 0.824 - 0.895 protein kinase C substrate 80K-H [Source:ZFIN;Acc:ZDB-GENE-040426-770]
22. hdac8 ENSDARG00000003021, ENSDARG00000105159 1729 1.717 - 0.967 - - - - 0.750 - - histone deacetylase 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2772]
23. rybpb ENSDARG00000053459 1464 1.715 - - - - - 0.814 - - 0.901 RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
24. galnt12 ENSDARG00000055490 1653 1.708 - 0.986 - - - 0.722 - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 [Source:ZFIN;Acc:ZDB-GENE-060503-704]
25. si:dkey-256i11.1 si:dkey-256i11.1 3373 1.704 - 0.942 - - - - - - 0.762
26. mycb ENSDARG00000007241 3988 1.704 - 0.838 - - - - - - 0.866 MYC proto-oncogene, bHLH transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-780]
27. cldnf ENSDARG00000043133 1006 1.702 - 0.856 - - - - - - 0.846 claudin f [Source:ZFIN;Acc:ZDB-GENE-010328-6]
28. CR293507.1 ENSDARG00000112572 3198 1.701 - - - - - 0.835 - - 0.866
29. mcts1 ENSDARG00000025972 4662 1.695 - 0.962 - - - - 0.733 - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
30. ccnc ENSDARG00000009607 1240 1.692 - - - - - - 0.763 - 0.929 cyclin C [Source:ZFIN;Acc:ZDB-GENE-030131-7369]
31. BAZ2B BAZ2B 3285 1.685 - 0.953 - - - - 0.732 - -
32. thumpd3 ENSDARG00000059634, ENSDARG00000113066 7065 1.682 - 0.965 - - - 0.717 - - - THUMP domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9745]
33. zbtb10 ENSDARG00000077101 8683 1.673 - 0.954 - - - 0.719 - - - zinc finger and BTB domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030429-10]
34. CABZ01092303.1 CABZ01092303.1 8825 1.672 - 0.840 - - - - - - 0.832
35. PLEKHH3 ENSDARG00000070174 2117 1.651 - - - - - 0.906 - - 0.745 pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
36. greb1 ENSDARG00000070794 1741 1.647 - - - - - - 0.752 - 0.895 growth regulating estrogen receptor binding 1 [Source:ZFIN;Acc:ZDB-GENE-070112-332]
37. zfand3 ENSDARG00000052833 2682 1.647 - 0.924 - - - - - 0.723 - zinc finger, AN1-type domain 3 [Source:ZFIN;Acc:ZDB-GENE-050706-134]
38. gpr56 gpr56 523 1.646 - - - - - - 0.710 - 0.936
39. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.64 - 0.876 - - - 0.764 - - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
40. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.639 - - - - - - 0.731 - 0.908 eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
41. PACS1 PACS1 2061 1.626 - - - - - 0.718 - - 0.908
42. atp6v1c1a ENSDARG00000023967 4611 1.625 - - - - - 0.713 - - 0.912 ATPase H+ transporting V1 subunit C1a [Source:ZFIN;Acc:ZDB-GENE-030616-612]
43. si:dkey-67c22.2 ENSDARG00000055389 6410 1.619 - - - - - 0.798 0.821 - - si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
44. myclb ENSDARG00000034956, ENSDARG00000110185 1466 1.614 - - - - - 0.844 0.770 - - MYCL proto-oncogene, bHLH transcription factor b [Source:ZFIN;Acc:ZDB-GENE-030131-5561]
45. hsp90b1 ENSDARG00000003570, ENSDARG00000114206 5097 1.611 - - - - - 0.835 - - 0.776 heat shock protein 90, beta (grp94), member 1 [Source:ZFIN;Acc:ZDB-GENE-031002-1]
46. idh3a ENSDARG00000030278 2983 1.606 - - - - - 0.750 - - 0.856 isocitrate dehydrogenase 3 (NAD+) alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1007]
47. enpp4 ENSDARG00000006877, ENSDARG00000110396 994 1.605 - - - - - 0.702 - - 0.903 ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:ZFIN;Acc:ZDB-GENE-050417-444]
48. rhoaa ENSDARG00000026845 6900 1.605 - 0.871 - - - 0.734 - - - ras homolog gene family, member Aa [Source:ZFIN;Acc:ZDB-GENE-040426-2150]
49. st5 ENSDARG00000037363, ENSDARG00000112276 1797 1.603 - - - - - - 0.746 - 0.857 suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
50. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.6 - - 0.736 - - - - - 0.864 N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
51. atf7ip ENSDARG00000069619 5495 1.592 - - - - - 0.743 0.849 - - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
52. nop16 ENSDARG00000044402 3645 1.585 - - - - - - 0.737 - 0.848 NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
53. cdk6 ENSDARG00000070228 1778 1.578 - - - - - 0.797 0.781 - - cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
54. slu7 ENSDARG00000038870 1311 1.576 - - 0.702 - - - - - 0.874 SLU7 homolog, splicing factor [Source:ZFIN;Acc:ZDB-GENE-041114-62]
55. zgc:174906 ENSDARG00000075314 2187 1.572 - - - - - - 0.708 - 0.864 zgc:174906 [Source:ZFIN;Acc:ZDB-GENE-030131-6125]
56. nuf2 ENSDARG00000034624 2252 1.565 - - - - - - 0.732 - 0.833 NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
57. srrm1 ENSDARG00000001244 4972 1.561 - - 0.755 - - - 0.806 - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
58. AL935186.4 ENSDARG00000110268 1701 1.555 - 0.762 - - - - - - 0.793
59. zswim5 ENSDARG00000055900 4243 1.552 - - - - - 0.771 0.781 - - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
60. sart3 ENSDARG00000008032 2594 1.55 - - - - - - 0.772 - 0.778 squamous cell carcinoma antigen recognized by T cells 3 [Source:ZFIN;Acc:ZDB-GENE-040724-10]
61. clta ENSDARG00000045618, ENSDARG00000115484 11767 1.548 - - - - - - 0.704 - 0.844 clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
62. C21H5orf15 C21H5orf15 2318 1.542 - - - - - 0.773 - - 0.769
63. fam53b ENSDARG00000016156 2143 1.535 - - - - - 0.744 - - 0.791 family with sequence similarity 53, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2495]
64. mau2 ENSDARG00000042056 2378 1.532 - - - - - - 0.760 - 0.772 MAU2 sister chromatid cohesion factor [Source:ZFIN;Acc:ZDB-GENE-050522-383]
65. Mar-05 Mar-05 2391 1.519 - - - - - 0.815 - - 0.704
66. ldb1a ENSDARG00000010137 3035 1.515 - - - - - 0.798 0.717 - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
67. dkc1 ENSDARG00000016484 7088 1.511 - 0.798 - - - - - - 0.713 dyskeratosis congenita 1, dyskerin [Source:ZFIN;Acc:ZDB-GENE-031118-120]
68. KIF4A KIF4A 3322 1.51 - - - - - - 0.767 - 0.743
69. pgam5 ENSDARG00000035608 4044 1.498 - - - - - 0.714 - - 0.784 PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
70. cltcb ENSDARG00000090716 5544 1.493 - - - - - 0.700 0.793 - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
71. ZNF618 ENSDARG00000071469 2347 1.49 - - - - - - 0.722 - 0.768 zinc finger protein 618 [Source:ZFIN;Acc:ZDB-GENE-030131-2063]
72. tcf7l2 ENSDARG00000004415, ENSDARG00000110486 1920 1.489 - - - - - 0.762 0.727 - - transcription factor 7 like 2 [Source:ZFIN;Acc:ZDB-GENE-991110-8]
73. ddx19 ENSDARG00000005699 4602 1.487 - - - - - 0.755 0.732 - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
74. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 1.485 - - 0.750 - - - 0.735 - - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
75. SSBP4 ENSDARG00000056483 5156 1.476 - - 0.721 - - - 0.755 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
76. arih2 ENSDARG00000012848 7087 1.468 - - - - - 0.756 0.712 - - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
77. inip ENSDARG00000028523 1925 1.465 - - - - - 0.760 0.705 - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
78. si:ch211-288g17.3 ENSDARG00000070959 2425 1.464 - - 0.720 - - - 0.744 - - si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]
79. eif5b ENSDARG00000016548 3972 1.462 - - - - - - 0.701 - 0.761 eukaryotic translation initiation factor 5B [Source:ZFIN;Acc:ZDB-GENE-050208-20]
80. abcf2a ENSDARG00000038785 2065 1.46 0.709 - - - - - 0.751 - - ATP-binding cassette, sub-family F (GCN20), member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8714]
81. prpf38a ENSDARG00000039213, ENSDARG00000116046 1537 1.442 0.707 - - - - - 0.735 - - pre-mRNA processing factor 38A [Source:ZFIN;Acc:ZDB-GENE-040801-225]
82. cnn3b ENSDARG00000029856 4807 1.427 - - - - - 0.700 0.727 - - calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
83. pum1 ENSDARG00000099256 5017 1.427 - - - - - 0.715 0.712 - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
84. si:dkey-18f7.2 si:dkey-18f7.2 895 1.414 - - - - - 0.702 0.712 - -
85. pik3cb ENSDARG00000075253 2075 0.994 - 0.994 - - - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-1904]
86. arid4a ENSDARG00000043873 4176 0.992 - 0.992 - - - - - - - AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
87. tmem30aa ENSDARG00000030236 2842 0.989 - 0.989 - - - - - - - transmembrane protein 30Aa [Source:ZFIN;Acc:ZDB-GENE-040704-26]
88. fhl1b ENSDARG00000056653 577 0.988 - 0.988 - - - - - - - four and a half LIM domains 1b [Source:ZFIN;Acc:ZDB-GENE-031219-1]
89. tyw1 ENSDARG00000062987 1759 0.987 - 0.987 - - - - - - - tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-688]
90. phlda3 ENSDARG00000037804 1116 0.987 - 0.987 - - - - - - - pleckstrin homology-like domain, family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-030616-267]
91. sash1a ENSDARG00000007179 2497 0.987 - 0.987 - - - - - - - SAM and SH3 domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9960]
92. phc1 ENSDARG00000002971 924 0.987 - 0.987 - - - - - - - polyhomeotic homolog 1 [Source:ZFIN;Acc:ZDB-GENE-081022-39]
93. mtfr1l ENSDARG00000003940, ENSDARG00000111141 3047 0.987 - 0.987 - - - - - - - mitochondrial fission regulator 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-6228]
94. IWS1 2428 0.986 - 0.986 - - - - - - - IWS1, SUPT6H interacting protein, transcript variant X2
95. jarid2b ENSDARG00000062268 2206 0.986 - 0.986 - - - - - - - jumonji, AT rich interactive domain 2b [Source:ZFIN;Acc:ZDB-GENE-060503-246]
96. mtm1 ENSDARG00000037560 1086 0.986 - 0.986 - - - - - - - myotubularin 1 [Source:ZFIN;Acc:ZDB-GENE-051113-128]
97. mrpl19 ENSDARG00000011885 2208 0.986 - 0.986 - - - - - - - mitochondrial ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040801-55]
98. zgc:101663 ENSDARG00000037852 830 0.986 - 0.986 - - - - - - - zgc:101663 [Source:ZFIN;Acc:ZDB-GENE-041114-149]
99. tarbp2 ENSDARG00000070471 1946 0.986 - 0.986 - - - - - - - TAR (HIV) RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8085]
100. dlg5a ENSDARG00000074059 1834 0.986 - 0.986 - - - - - - - discs, large homolog 5a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-3149]

There are 1352 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA