Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for taf11

Gene Name Gene ID Reads Annotation
taf11 ENSDARG00000037855 2624 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040718-283]










Genes with expression patterns similar to taf11

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. taf11 ENSDARG00000037855 2624 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040718-283]
2. golga7 ENSDARG00000057676 4691 2.428 - 0.824 - - 0.903 0.701 - - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
3. psma2 ENSDARG00000040121 2504 2.35 - 0.733 - - - - 0.768 0.849 - proteasome subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-050522-479]
4. arfrp1 ENSDARG00000057857 2840 1.835 - - - - 0.933 - - 0.902 - ADP-ribosylation factor related protein 1 [Source:ZFIN;Acc:ZDB-GENE-050227-14]
5. arrb2b ENSDARG00000011545 3126 1.835 - - - - 0.906 - - 0.929 - arrestin, beta 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1332]
6. fbxl5 ENSDARG00000043046 1403 1.832 - - - - 0.940 - - 0.892 - F-box and leucine-rich repeat protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-900]
7. CPEB4 CPEB4 3249 1.76 - - - - 0.939 - - 0.821 -
8. usf2 ENSDARG00000020228 2667 1.753 - 0.797 - - 0.956 - - - - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
9. slc1a2b ENSDARG00000102453 3136 1.723 - - - - 0.844 - - 0.879 - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
10. ptges3b ENSDARG00000089626 5666 1.709 - - - - - - 0.824 0.885 - prostaglandin E synthase 3b (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040625-144]
11. TSSC4 ENSDARG00000036144 1994 1.708 - 0.861 - - - - - 0.847 - tumor suppressing subtransferable candidate 4 [Source:ZFIN;Acc:ZDB-GENE-060825-263]
12. tdg tdg 3269 1.694 - - - - 0.950 - 0.744 - -
13. idh3a ENSDARG00000030278 2983 1.693 - - - - 0.913 - 0.780 - - isocitrate dehydrogenase 3 (NAD+) alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1007]
14. agpat4 ENSDARG00000069044 4487 1.692 - - - - 0.859 - - 0.833 - 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1924]
15. snrpb ENSDARG00000011125 11729 1.69 - - - - 0.840 - - 0.850 - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
16. cdkn2aipnl ENSDARG00000053395 5107 1.689 0.745 - - - 0.944 - - - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
17. nup98 ENSDARG00000074955 3998 1.683 - - - - 0.969 0.714 - - - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
18. klhdc4 ENSDARG00000100206, ENSDARG00000113735 2362 1.682 - 0.792 - - - - - 0.890 - kelch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2057]
19. dhx8 ENSDARG00000054707 2088 1.677 - 0.771 - - - - - 0.906 - DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-050809-39]
20. ehd3 ENSDARG00000007869 3238 1.676 - - - - 0.899 - - 0.777 - EH-domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041014-352]
21. ufm1 ENSDARG00000043857 4152 1.672 - - - - 0.909 - - 0.763 - ubiquitin-fold modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2930]
22. sipa1l2 ENSDARG00000061640 4545 1.671 - - - - - 0.786 - 0.885 - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
23. mfap2 ENSDARG00000059367 3774 1.67 - - - - 0.891 - 0.779 - - microfibril associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6710]
24. zmpste24 ENSDARG00000044090, ENSDARG00000115387 3873 1.669 - - - - 0.912 0.757 - - - zinc metallopeptidase, STE24 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-6312]
25. si:dkey-19e4.5 ENSDARG00000089886 2562 1.668 - - - - 0.954 - 0.714 - - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
26. phf16 phf16 1116 1.665 - - - - 0.956 - 0.709 - -
27. ndufa4 ENSDARG00000056108, ENSDARG00000116304 2355 1.663 - - - - 0.923 - 0.740 - - NADH:ubiquinone oxidoreductase subunit A4 [Source:ZFIN;Acc:ZDB-GENE-040426-1962]
28. sepsecs ENSDARG00000033861 478 1.661 - - - - 0.960 - 0.701 - - Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase [Source:ZFIN;Acc:ZDB-GENE-040426-859]
29. fzd1 ENSDARG00000106062 1581 1.655 - - - - 0.955 0.700 - - - frizzled class receptor 1 [Source:ZFIN;Acc:ZDB-GENE-990415-219]
30. alx4a ENSDARG00000088332 895 1.653 - - - - 0.953 0.700 - - - ALX homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-070712-3]
31. LDLRAD4 LDLRAD4 1237 1.649 - - - - - 0.762 - 0.887 -
32. samm50l ENSDARG00000039681 2465 1.642 - - - - 0.940 - 0.702 - - sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
33. cdk7 ENSDARG00000051916 746 1.632 - - - - - - 0.746 0.886 - cyclin-dependent kinase 7 [Source:ZFIN;Acc:ZDB-GENE-010320-2]
34. clasp2 ENSDARG00000020345 3382 1.627 - - - - - 0.743 - 0.884 - cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
35. CABZ01038494.1 ENSDARG00000088258 908 1.623 - - - - - 0.744 - 0.879 - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
36. c1d ENSDARG00000021112 2839 1.622 - - - - - - 0.710 0.912 - C1D nuclear receptor corepressor [Source:ZFIN;Acc:ZDB-GENE-041024-8]
37. zgc:65772 zgc:65772 2092 1.62 - - - 0.732 - - - 0.888 -
38. si:ch211-161h7.4 ENSDARG00000087238 4399 1.617 - - - - 0.876 - - 0.741 - si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
39. smad7 ENSDARG00000016858 1660 1.614 - - - - - 0.728 - 0.886 - SMAD family member 7 [Source:ZFIN;Acc:ZDB-GENE-030128-3]
40. mapk6 ENSDARG00000032103 6422 1.606 - 0.716 - - 0.890 - - - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
41. si:ch211-194k22.8 ENSDARG00000096711 1318 1.6 - - - - - - 0.709 0.891 - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
42. si:ch211-209n20.57 si:ch211-209n20.57 1188 1.597 - - - - - 0.705 - 0.892 -
43. fkbp10b ENSDARG00000045129 3525 1.596 - 0.804 - - - - 0.792 - - FK506 binding protein 10b [Source:ZFIN;Acc:ZDB-GENE-030131-3101]
44. dock7 ENSDARG00000078675 1995 1.592 - 0.705 - - - - - 0.887 - dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
45. myef2 ENSDARG00000059398 6050 1.592 - - - - - 0.787 - 0.805 - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
46. lipin2 2021 1.586 - 0.724 - - - 0.862 - - - lipin 2, transcript variant X2
47. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.584 - - - - 0.872 - - 0.712 - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
48. pias4a ENSDARG00000007081 4264 1.571 - 0.769 - - - - 0.802 - - protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
49. GABARAP GABARAP 8341 1.568 - - - - 0.802 - 0.766 - -
50. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.566 - - - - - 0.794 - 0.772 - heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
51. hmgb3a ENSDARG00000056725 15668 1.565 0.700 - - - - - - 0.865 - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
52. chuk ENSDARG00000011662 1668 1.558 - 0.753 - - - 0.805 - - - conserved helix-loop-helix ubiquitous kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1069]
53. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 1.556 - - - - - 0.735 0.821 - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
54. degs1 ENSDARG00000007347 2481 1.553 - 0.834 - - - 0.719 - - - delta(4)-desaturase, sphingolipid 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5283]
55. GATAD2B ENSDARG00000005834 3855 1.55 - - - - - 0.703 - 0.847 - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
56. maf1 ENSDARG00000013122 3365 1.544 - - 0.718 - - - - 0.826 - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
57. dkc1 ENSDARG00000016484 7088 1.536 - - - - 0.764 - 0.772 - - dyskeratosis congenita 1, dyskerin [Source:ZFIN;Acc:ZDB-GENE-031118-120]
58. ssbp3b ENSDARG00000030155 7163 1.535 0.701 0.834 - - - - - - - single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
59. marcksl1b ENSDARG00000035715 37390 1.533 0.762 - - - - - - 0.771 - MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
60. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.532 - - - - 0.814 0.718 - - - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
61. rgl1 ENSDARG00000005989, ENSDARG00000114367 2501 1.53 - - - - - 0.717 - 0.813 - ral guanine nucleotide dissociation stimulator-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1816]
62. sec11a ENSDARG00000008936, ENSDARG00000116303 6529 1.528 - 0.763 - - - - 0.765 - - SEC11 homolog A, signal peptidase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040718-227]
63. rmnd5b ENSDARG00000043359 3054 1.527 - - - - - 0.766 0.761 - - required for meiotic nuclear division 5 homolog B [Source:ZFIN;Acc:ZDB-GENE-040426-1744]
64. mllt10 ENSDARG00000045401 7557 1.525 - - - - - 0.754 - 0.771 - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
65. sarnp ENSDARG00000059357 4768 1.522 - 0.714 - - - - 0.808 - - SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
66. MKI67 ENSDARG00000091150 11038 1.522 - - - - 0.723 - - 0.799 - marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
67. atp6v1e1b ENSDARG00000030694 5452 1.521 - - - - - 0.709 - 0.812 - ATPase H+ transporting V1 subunit E1b [Source:ZFIN;Acc:ZDB-GENE-020419-11]
68. ccm2 ENSDARG00000013705 3464 1.501 - - - - - - 0.736 0.765 - CCM2 scaffold protein [Source:ZFIN;Acc:ZDB-GENE-040712-6]
69. hsp90b1 ENSDARG00000003570, ENSDARG00000114206 5097 1.496 - 0.768 - - - - 0.728 - - heat shock protein 90, beta (grp94), member 1 [Source:ZFIN;Acc:ZDB-GENE-031002-1]
70. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 1.493 - - - - - 0.730 - 0.763 - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
71. rgs3b ENSDARG00000035132 876 1.492 - - - - - 0.758 0.734 - - regulator of G protein signaling 3b [Source:ZFIN;Acc:ZDB-GENE-060531-24]
72. atp6v1c1a ENSDARG00000023967 4611 1.489 - 0.714 - - - 0.775 - - - ATPase H+ transporting V1 subunit C1a [Source:ZFIN;Acc:ZDB-GENE-030616-612]
73. lmnb1 ENSDARG00000044299 9817 1.475 - - - - 0.740 - 0.735 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
74. gna11b ENSDARG00000053326 5118 1.474 - 0.745 - - - - - 0.729 - guanine nucleotide binding protein (G protein), alpha 11b (Gq class) [Source:ZFIN;Acc:ZDB-GENE-041121-9]
75. ubr7 ENSDARG00000005536 1108 1.461 - - - - - 0.703 0.758 - - ubiquitin protein ligase E3 component n-recognin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-1535]
76. ppp2r1b ppp2r1b 3469 1.45 - - 0.744 - - - 0.706 - -
77. lypla2 ENSDARG00000053656 8971 1.445 - 0.742 - - - - - 0.703 - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
78. araf ENSDARG00000054533 1132 1.433 - 0.731 - - - 0.702 - - - A-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050102-2]
79. cnppd1 ENSDARG00000027078 3778 1.431 0.730 - - - - - 0.701 - - cyclin Pas1/PHO80 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6808]
80. fam53b ENSDARG00000016156 2143 1.426 - 0.725 - - - - 0.701 - - family with sequence similarity 53, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2495]
81. brd7 ENSDARG00000008380 3654 0.97 - - - - 0.970 - - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
82. CASKIN2_1 CASKIN2_1 2299 0.969 - - - - 0.969 - - - -
83. smurf2 ENSDARG00000038067 2057 0.969 - - - - 0.969 - - - - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
84. gpr161 ENSDARG00000055659 454 0.968 - - - - 0.968 - - - - G protein-coupled receptor 161 [Source:ZFIN;Acc:ZDB-GENE-030616-58]
85. tuft1b ENSDARG00000071010 909 0.967 - - - - 0.967 - - - - tuftelin 1b [Source:ZFIN;Acc:ZDB-GENE-060503-150]
86. ccnb1 ENSDARG00000051923 3226 0.966 - - - - 0.966 - - - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
87. mbd1 mbd1 1309 0.966 - - - - 0.966 - - - -
88. wif1 ENSDARG00000005541 1689 0.966 - - - - 0.966 - - - - wnt inhibitory factor 1 [Source:ZFIN;Acc:ZDB-GENE-990712-17]
89. fam129ba ENSDARG00000062970 1578 0.965 - - - - 0.965 - - - - family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
90. gcfc2 ENSDARG00000079020 479 0.965 - - - - 0.965 - - - - GC-rich sequence DNA-binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-19]
91. tmem62 ENSDARG00000053890 1233 0.965 - - - - 0.965 - - - - transmembrane protein 62 [Source:ZFIN;Acc:ZDB-GENE-040426-1837]
92. adi1 ENSDARG00000020448 1402 0.965 - - - - 0.965 - - - - acireductone dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2799]
93. gon4l ENSDARG00000005867 982 0.964 - - - - 0.964 - - - - gon-4-like (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-070117-2447]
94. gpr98 gpr98 717 0.964 - - - - 0.964 - - - -
95. paqr3b ENSDARG00000044253, ENSDARG00000110049 381 0.964 - - - - 0.964 - - - - progestin and adipoQ receptor family member IIIb [Source:ZFIN;Acc:ZDB-GENE-050913-128]
96. lysmd2 ENSDARG00000091771, ENSDARG00000112692 1102 0.964 - - - - 0.964 - - - - LysM, putative peptidoglycan-binding, domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040801-250]
97. rtfdc1 1792 0.964 - - - - 0.964 - - - - replication termination factor 2 domain containing 1, transcript variant X2
98. znf143a ENSDARG00000012887 1393 0.963 - - - - 0.963 - - - - zinc finger protein 143a [Source:ZFIN;Acc:ZDB-GENE-041114-154]
99. slc38a4 ENSDARG00000018149 2344 0.963 - - - - 0.963 - - - - solute carrier family 38, member 4 [Source:ZFIN;Acc:ZDB-GENE-041010-14]
100. frem1b ENSDARG00000062402 750 0.962 - - - - 0.962 - - - - Fras1 related extracellular matrix 1b [Source:ZFIN;Acc:ZDB-GENE-050208-783]

There are 1154 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA