Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for syt9a

Gene Name Gene ID Reads Annotation
syt9a ENSDARG00000003994 298 synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]










Genes with expression patterns similar to syt9a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. syt9a ENSDARG00000003994 298 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
2. nrxn2a ENSDARG00000061454 291 3.433 0.874 - - - - 0.849 0.747 0.963 - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
3. calb2a ENSDARG00000041062, ENSDARG00000110220 459 3.404 0.746 1.000 - - - 0.855 0.803 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
4. PPFIA3 ENSDARG00000077053 310 3.389 0.765 1.000 - - - 0.902 0.722 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
5. ppp3ca ENSDARG00000004988 615 3.355 0.896 - - - - 0.947 0.733 0.779 - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
6. dpysl5a ENSDARG00000011141 1827 3.28 - 0.797 - - - 0.914 0.833 0.736 - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
7. stap2a ENSDARG00000092810 591 2.798 - - - - - 0.889 0.953 0.956 - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
8. CABZ01038313.1 CABZ01038313.1 79 2.785 - 1.000 - - - 0.905 0.880 - -
9. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 2.743 0.849 1.000 - - - 0.894 - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
10. bsk146 ENSDARG00000099069 274 2.733 - 1.000 - - - 0.975 0.758 - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
11. zic1 ENSDARG00000015567 2520 2.731 0.880 - - - - 0.946 - 0.905 - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
12. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.727 0.946 - - - - 0.974 0.807 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
13. TUSC5 TUSC5 1436 2.726 0.917 - - - - 0.950 0.859 - -
14. nmnat2 ENSDARG00000004580 370 2.721 0.986 0.948 - - - 0.787 - - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
15. fez1 ENSDARG00000023174 701 2.715 0.922 - - - - 0.839 0.954 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
16. KCNAB2 KCNAB2 129 2.711 0.993 - - - - 0.861 0.857 - -
17. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.705 0.906 - - - - 0.916 0.883 - -
18. zic5 ENSDARG00000016022 1034 2.703 0.916 - - - - 0.873 - 0.914 - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
19. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 2.681 0.951 0.822 - - - 0.908 - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
20. stmn2a ENSDARG00000033234 2272 2.681 0.950 - - - - 0.951 0.780 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
21. CABZ01065506.1 CABZ01065506.1 204 2.655 - 1.000 - - - 0.897 0.758 - -
22. pnoca ENSDARG00000025024 467 2.652 0.898 - - - - 0.964 0.790 - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
23. atp2b3b ENSDARG00000023445 1424 2.649 0.974 0.716 - - - 0.959 - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
24. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 2.646 0.849 0.900 - - - 0.897 - - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
25. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 2.643 - 0.921 - - - 0.911 0.811 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
26. scg2b ENSDARG00000038574 345 2.642 - - - - - 0.925 0.757 0.960 - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
27. thsd7ba ENSDARG00000095022 231 2.631 - 0.770 - - - 0.974 0.887 - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
28. SSBP2 ENSDARG00000099727 22 2.628 - 1.000 - - - 0.865 0.763 - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
29. CACFD1 ENSDARG00000090818 1298 2.615 - - - - - 0.950 0.756 0.909 - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
30. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 2.614 0.767 - - - - 0.991 0.856 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
31. nrn1a ENSDARG00000071860 1311 2.607 0.928 - - - - 0.916 0.763 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
32. TENM2 ENSDARG00000037122 48 2.606 0.843 1.000 - - - - 0.763 - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
33. adam11 ENSDARG00000079204 298 2.605 0.878 - - - - 0.787 0.940 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
34. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 2.603 0.766 1.000 - - - - 0.837 - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
35. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.6 0.903 - - - - 0.847 0.850 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
36. camta1a ENSDARG00000077428, ENSDARG00000116922 176 2.596 - 1.000 - - - 0.873 0.723 - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
37. stmn1b ENSDARG00000033655 9491 2.594 0.828 - - - - 0.978 0.788 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
38. C9H2orf69 C9H2orf69 148 2.58 0.896 - - - - 0.833 0.851 - -
39. scn8aa ENSDARG00000005775 792 2.579 0.911 - - - - 0.756 0.912 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
40. adarb1a ENSDARG00000041609 476 2.574 0.728 - - - - 0.980 0.866 - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
41. ttll7 ENSDARG00000062973 519 2.568 0.713 - - - - 0.921 - 0.934 - tubulin tyrosine ligase-like family, member 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2112]
42. nova1 ENSDARG00000020178 4129 2.56 - - - - - 0.825 0.843 0.892 - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
43. scrt2 ENSDARG00000056175 4331 2.552 0.795 - - - - 0.861 0.896 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
44. MAP1A MAP1A 847 2.548 0.881 - - - - 0.873 0.794 - -
45. notch1b ENSDARG00000052094 7874 2.547 - - - - - 0.925 0.768 0.854 - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
46. slc1a2b ENSDARG00000102453 3136 2.544 0.879 - - - - 0.797 0.868 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
47. amph ENSDARG00000007663 599 2.543 0.854 - - - - 0.825 0.864 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
48. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.539 0.953 - - - - 0.883 0.703 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
49. gap43 ENSDARG00000099744 4114 2.527 0.911 - - - - 0.848 0.768 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
50. PEX5L PEX5L 179 2.526 0.848 0.795 - - - - 0.883 - -
51. B4GALNT1 B4GALNT1 352 2.524 0.824 0.753 - - - 0.947 - - -
52. entpd3 ENSDARG00000035309 263 2.522 0.816 - - - - 0.943 0.763 - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
53. stmn2b ENSDARG00000070537 1586 2.517 0.795 - - - - 0.823 0.899 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
54. slc1a1 ENSDARG00000020212 104 2.512 0.843 - - - - 0.906 0.763 - - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
55. cadm3 ENSDARG00000057013 1545 2.506 0.922 - - - - 0.837 0.747 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
56. upf3a ENSDARG00000069297, ENSDARG00000111067 196 2.502 0.825 0.754 - - - 0.923 - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
57. dpysl4 ENSDARG00000103490 534 2.497 0.802 - - - - 0.922 0.773 - - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
58. wnt3 ENSDARG00000038990, ENSDARG00000111277 626 2.496 0.847 - - - - 0.768 - 0.881 - wingless-type MMTV integration site family, member 3 [Source:ZFIN;Acc:ZDB-GENE-081003-1]
59. olfm1b ENSDARG00000014053 1392 2.491 0.788 - - - - 0.872 0.831 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
60. pax3a ENSDARG00000010192 626 2.481 0.723 - - - - 0.925 0.833 - - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
61. tuba2 ENSDARG00000045014 1490 2.481 0.782 - - - - 0.938 0.761 - - tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
62. gabra5 ENSDARG00000070730 156 2.479 0.815 - - - - 0.867 0.797 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
63. snap25b ENSDARG00000058117 469 2.477 0.801 - - - - 0.748 0.928 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
64. cers6 ENSDARG00000053583 247 2.471 0.844 0.754 - - - 0.873 - - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
65. dixdc1a ENSDARG00000025302 716 2.464 - 0.700 - - - 0.849 - 0.915 - DIX domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030721-2]
66. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.463 0.743 - - - - 0.898 0.822 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
67. INA INA 950 2.46 0.900 - - - - 0.719 0.841 - -
68. slc1a3a ENSDARG00000104431 9888 2.46 0.859 - - - - 0.869 0.732 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
69. draxin ENSDARG00000058256, ENSDARG00000111676 266 2.457 0.718 - - - - - 0.778 0.961 - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
70. rtn1b ENSDARG00000021143 1682 2.452 0.832 - - - - 0.903 0.717 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
71. sh3gl2 sh3gl2 1305 2.444 0.819 - - - - 0.833 0.792 - -
72. spock2 ENSDARG00000075393 791 2.442 0.708 - - - - 0.939 0.795 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
73. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 2.441 0.805 - - - - 0.861 0.775 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
74. calb1 ENSDARG00000031598 252 2.433 0.879 - - - - 0.764 0.790 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
75. MAPK8IP1_1 MAPK8IP1_1 186 2.425 0.881 - - - - 0.825 0.719 - -
76. rab3ab ENSDARG00000043835 1267 2.423 0.834 - - - - 0.825 0.764 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
77. atl1 ENSDARG00000060481 251 2.42 0.725 - - - - 0.968 0.727 - - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
78. gsx1 ENSDARG00000035735 1243 2.418 0.861 - - - - - 0.841 0.716 - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
79. si:dkey-7f3.9 ENSDARG00000079008 318 2.404 0.724 - - - - 0.720 - 0.960 - si:dkey-7f3.9 [Source:ZFIN;Acc:ZDB-GENE-100922-197]
80. snap25a ENSDARG00000020609 4537 2.4 0.854 - - - - 0.832 0.714 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
81. stmn4l ENSDARG00000043932 654 2.396 0.766 - - - - 0.805 0.825 - - stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
82. ndrg4 ENSDARG00000103937 1234 2.395 0.784 - - - - 0.836 0.775 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
83. eno2 ENSDARG00000014287 2162 2.384 0.777 - - - - 0.898 0.709 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
84. sncgb ENSDARG00000109715 1014 2.374 0.758 - - - - 0.887 0.729 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
85. nadl1.2 695 2.371 0.734 - - - - 0.898 0.739 - - neural adhesion molecule L1.2, transcript variant X1
86. stx1b ENSDARG00000000503 2724 2.362 0.827 - - - - 0.742 0.793 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
87. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.352 0.791 - - - - 0.781 0.780 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
88. plp1a ENSDARG00000103732 3544 2.32 0.715 - - - - 0.895 0.710 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
89. C8H1orf106 C8H1orf106 2690 2.305 0.819 - - - - - 0.718 0.768 -
90. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 2.298 0.844 - - - - 0.703 0.751 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
91. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.295 0.779 - - - - 0.816 0.700 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
92. tuba1c ENSDARG00000055216 8384 2.292 0.733 - - - - 0.814 0.745 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
93. spock3 ENSDARG00000070266, ENSDARG00000110158 934 2.283 - - - - - 0.810 0.770 0.703 - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
94. ZFHX3 ENSDARG00000103057 7759 2.281 0.779 - - - - 0.735 0.767 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
95. si:ch211-237c9.3 si:ch211-237c9.3 17 1.991 - 1.000 - - - - 0.991 - -
96. si:dkey-13a21.4 ENSDARG00000026098, ENSDARG00000113692 87 1.958 - 1.000 - - - - - 0.958 - si:dkey-13a21.4 [Source:ZFIN;Acc:ZDB-GENE-040724-163]
97. tmem91 ENSDARG00000068456 81 1.955 - - - - - 0.964 0.991 - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
98. GADD45G GADD45G 382 1.932 0.932 1.000 - - - - - - -
99. KCNIP4 ENSDARG00000088100 86 1.93 - 1.000 - - - 0.930 - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
100. atat1 ENSDARG00000004472 700 1.922 - 1.000 - - - 0.922 - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]

There are 2812 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA