Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for syt5a

Gene Name Gene ID Reads Annotation
syt5a ENSDARG00000037941 81 synaptotagmin Va [Source:ZFIN;Acc:ZDB-GENE-040718-110]










Genes with expression patterns similar to syt5a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. syt5a ENSDARG00000037941 81 5 - - 1.000 1.000 1.000 - - 1.000 1.000 synaptotagmin Va [Source:ZFIN;Acc:ZDB-GENE-040718-110]
2. opn1lw2 ENSDARG00000044861, ENSDARG00000115709 277 1.954 - - - - - - - 0.967 0.987 opsin 1 (cone pigments), long-wave-sensitive, 2 [Source:ZFIN;Acc:ZDB-GENE-040718-141]
3. UNC119 UNC119 104 1.853 - - - - - - - 0.960 0.893
4. CU633477.1 CU633477.1 19 1.777 - - - 0.882 0.895 - - - -
5. zic5 ENSDARG00000016022 1034 1.771 - - - - - - - 0.835 0.936 zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
6. rgs16 ENSDARG00000040177, ENSDARG00000110238 12 1.762 - - - 0.936 0.826 - - - - regulator of G protein signaling 16 [Source:ZFIN;Acc:ZDB-GENE-050417-393]
7. elovl4b ENSDARG00000027495 107 1.753 - - - - - - - 0.955 0.798 ELOVL fatty acid elongase 4b [Source:ZFIN;Acc:ZDB-GENE-030131-7672]
8. gnat2 ENSDARG00000042529 112 1.736 - - - - - - - 0.805 0.931 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-011128-10]
9. LPL ENSDARG00000087697 18 1.725 - - - 0.957 0.768 - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
10. inaa ENSDARG00000011862 115 1.724 - - - - - - - 0.801 0.923 internexin neuronal intermediate filament protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-060531-65]
11. FP245465.3 FP245465.3 5 1.71 - - 0.830 - 0.880 - - - -
12. si:dkey-25o1.2 si:dkey-25o1.2 86 1.706 - - - - - - - 0.950 0.756
13. syt5b ENSDARG00000011640 70 1.705 - - - - - - - 0.804 0.901 synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
14. si:ch73-211l2.1 605 1.7 - - - - - - - 0.766 0.934 si:ch73-211l2.1
15. mgrn1a ENSDARG00000100072 263 1.697 - - - 0.913 - - - 0.784 - mahogunin, ring finger 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6192]
16. ponzr3 ENSDARG00000088589, ENSDARG00000116407 1373 1.696 - - - - - - - 0.842 0.854 plac8 onzin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-050506-38]
17. fabp7b ENSDARG00000034650 397 1.671 - - - - - - - 0.854 0.817 fatty acid binding protein 7, brain, b [Source:ZFIN;Acc:ZDB-GENE-040614-4]
18. fut9d ENSDARG00000028098 427 1.652 - - - - - - - 0.774 0.878 fucosyltransferase 9d [Source:ZFIN;Acc:ZDB-GENE-050309-15]
19. gngt1 ENSDARG00000035798, ENSDARG00000116914 255 1.643 - - - - - - - 0.776 0.867 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7596]
20. efcab4bb efcab4bb 27 1.555 - - - 0.747 - - - - 0.808
21. fam46ba 4575 1.544 - - - - - - - 0.786 0.758 family with sequence similarity 46, member Ba
22. zic6 ENSDARG00000071496 402 1.526 - - - - - - - 0.768 0.758 zic family member 6 [Source:ZFIN;Acc:ZDB-GENE-061207-1]
23. alg11 ENSDARG00000031202, ENSDARG00000110001 308 1.505 - - - - - - - 0.718 0.787 asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-7282]
24. pcp4l1 ENSDARG00000023181 117 1.48 - - - 0.744 - - - 0.736 - Purkinje cell protein 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040724-35]
25. KHDRBS3 ENSDARG00000101020 408 1.45 - - - - - - - 0.702 0.748 KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
26. gfpt2 ENSDARG00000044094 2503 1.436 - - - - - - - 0.731 0.705 glutamine-fructose-6-phosphate transaminase 2 [Source:ZFIN;Acc:ZDB-GENE-071113-1]
27. CR792453.3 ENSDARG00000110328 5 1 - - - - 1.000 - - - - uncharacterized LOC110438862 [Source:NCBI gene;Acc:110438862]
28. Metazoa_SRP_23 Metazoa_SRP_23 3 1 - - - - 1.000 - - - -
29. si:dkeyp-82a1.5 si:dkeyp-82a1.5 6 0.988 - - - 0.988 - - - - -
30. si:ch211-62a1.1 si:ch211-62a1.1 6 0.988 - - - 0.988 - - - - -
31. C12H10orf107 C12H10orf107 8 0.988 - - - 0.988 - - - - -
32. si:ch73-236c18.7 ENSDARG00000098706 6 0.988 - - - 0.988 - - - - - si:ch73-236c18.7 [Source:ZFIN;Acc:ZDB-GENE-121214-3]
33. ugt5f1 ENSDARG00000054835 2 0.988 - - - 0.988 - - - - - UDP glucuronosyltransferase 5 family, polypeptide F1 [Source:ZFIN;Acc:ZDB-GENE-100406-6]
34. si:dkey-18j14.4 si:dkey-18j14.4 60 0.988 - - - 0.988 - - - - -
35. smtlb ENSDARG00000017251 7 0.988 - - - 0.988 - - - - - somatolactin beta [Source:ZFIN;Acc:ZDB-GENE-060123-1]
36. CR759791.3 CR759791.3 134 0.988 - - - 0.988 - - - - -
37. GRM1 GRM1 4 0.988 - - - 0.988 - - - - -
38. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 0.988 - - - 0.988 - - - - - POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
39. si:dkey-234l24.7_1 ENSDARG00000113738 4 0.988 - - - 0.988 - - - - - si:dkey-234l24.7 [Source:ZFIN;Acc:ZDB-GENE-050420-90]
40. il22 ENSDARG00000045673 2 0.988 - - - 0.988 - - - - - interleukin 22 [Source:ZFIN;Acc:ZDB-GENE-060209-3]
41. taar20z ENSDARG00000111001, ENSDARG00000112915 4 0.988 - - - 0.988 - - - - - trace amine associated receptor 20z [Source:ZFIN;Acc:ZDB-GENE-060414-14]
42. diaph3 ENSDARG00000090785 16 0.988 - - - 0.988 - - - - - diaphanous-related formin 3 [Source:ZFIN;Acc:ZDB-GENE-040801-144]
43. smarcd3b ENSDARG00000019969 11 0.988 - - - 0.988 - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
44. rab44 ENSDARG00000028389 27 0.988 - - - 0.988 - - - - - RAB44, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040724-117]
45. vap ENSDARG00000093053, ENSDARG00000100949 6 0.988 - - - 0.988 - - - - - vascular associated protein [Source:ZFIN;Acc:ZDB-GENE-090313-42]
46. eef2a.2 ENSDARG00000042065, ENSDARG00000111159, ENSDARG00000112764 4 0.988 - - - 0.988 - - - - - eukaryotic translation elongation factor 2a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050208-348]
47. prop1 ENSDARG00000039756, ENSDARG00000109950, ENSDARG00000114449 10 0.988 - - - 0.988 - - - - - PROP paired-like homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-081107-40]
48. cx41.8 cx41.8 7 0.988 - - - 0.988 - - - - -
49. si:dkey-156m2.2 si:dkey-156m2.2 2 0.988 - - - 0.988 - - - - -
50. tacr3l ENSDARG00000003054 10 0.988 - - - 0.988 - - - - - tachykinin receptor 3-like [Source:ZFIN;Acc:ZDB-GENE-061207-19]
51. ZGC:165551 2 0.988 - - - 0.988 - - - - - zgc:165551
52. mir148 75 0.98 - - - 0.980 - - - - - microRNA 148
53. HTR7 17 0.979 - - - 0.979 - - - - - 5-hydroxytryptamine receptor 7
54. rx3 ENSDARG00000052893 43 0.972 - - - 0.972 - - - - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
55. prl ENSDARG00000037946 80 0.969 - - - 0.969 - - - - - prolactin [Source:ZFIN;Acc:ZDB-GENE-030513-1]
56. CCDC141 ENSDARG00000095675 94 0.966 - - - 0.966 - - - - - coiled-coil domain containing 141 [Source:ZFIN;Acc:ZDB-GENE-081104-472]
57. saga ENSDARG00000012610 63 0.964 - - - - - - - - 0.964 S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
58. BX897714.3 BX897714.3 3 0.964 - - - 0.964 - - - - -
59. stub1 ENSDARG00000045228 105 0.963 - - - 0.963 - - - - - STIP1 homology and U-Box containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2963]
60. zgc:158340 zgc:158340 21 0.958 - - - - - - - - 0.958
61. slc23a2 ENSDARG00000017365, ENSDARG00000114446 6 0.958 - - - 0.958 - - - - - solute carrier family 23 (ascorbic acid transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-090521-3]
62. si:dkey-22o22.2 ENSDARG00000102445 149 0.956 - - - - - - - 0.956 - si:dkey-22o22.2 [Source:ZFIN;Acc:ZDB-GENE-100922-84]
63. CABZ01085979.1 CABZ01085979.1 4 0.956 - - - 0.956 - - - - -
64. agrn_1 ENSDARG00000079388, ENSDARG00000110127 47 0.954 - - - 0.954 - - - - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
65. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 0.954 - - - 0.954 - - - - - si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
66. htr1fa ENSDARG00000002773, ENSDARG00000109862 38 0.954 - - - 0.954 - - - - - 5-hydroxytryptamine (serotonin) receptor 1Fa [Source:ZFIN;Acc:ZDB-GENE-081105-125]
67. zgc:163143 ENSDARG00000076437 166 0.953 - - - - - - - 0.953 - zgc:163143 [Source:ZFIN;Acc:ZDB-GENE-070410-143]
68. guca1g ENSDARG00000045737, ENSDARG00000114717 22 0.95 - - - - - - - - 0.950 guanylate cyclase activator 1g [Source:ZFIN;Acc:ZDB-GENE-050120-1]
69. CABZ01112215.1 CABZ01112215.1 23 0.948 - - - - 0.948 - - - -
70. aanat2 ENSDARG00000079802 175 0.946 - - - - - - - - 0.946 arylalkylamine N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-991019-6]
71. si:ch211-264f5.2 ENSDARG00000078547 12 0.946 - - - - 0.946 - - - - si:ch211-264f5.2 [Source:ZFIN;Acc:ZDB-GENE-080303-2]
72. CABZ01088365.1 CABZ01088365.1 66 0.945 - - - - - - - - 0.945
73. igfbp6b ENSDARG00000090833 37 0.944 - - - 0.944 - - - - - insulin-like growth factor binding protein 6b [Source:ZFIN;Acc:ZDB-GENE-090521-2]
74. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 0.943 - - - - - - - - 0.943 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
75. sh3bgrl2 ENSDARG00000036878 282 0.939 - - - - - - - 0.939 - SH3 domain binding glutamate-rich protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040704-38]
76. gnb3b ENSDARG00000002696 46 0.934 - - - - - - - - 0.934 guanine nucleotide binding protein (G protein), beta polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2280]
77. zgc:158432 ENSDARG00000067806, ENSDARG00000109239 4 0.933 - - - 0.933 - - - - - zgc:158432 [Source:ZFIN;Acc:ZDB-GENE-061201-57]
78. si:ch73-92e7.1 si:ch73-92e7.1 1 0.932 - - 0.932 - - - - - -
79. BX548021.2_1 BX548021.2_1 164 0.932 - - - - - - - 0.932 -
80. si:ch211-222m18.4 ENSDARG00000094425 7 0.928 - - - - 0.928 - - - - si:ch211-222m18.4 [Source:ZFIN;Acc:ZDB-GENE-050419-64]
81. cx28.9 ENSDARG00000041797 12 0.928 - - - - 0.928 - - - - connexin 28.9 [Source:ZFIN;Acc:ZDB-GENE-041114-200]
82. TRIM35_7 TRIM35_7 22 0.928 - - - - 0.928 - - - -
83. si:dkey-90a24.1 3 0.928 - - - - 0.928 - - - - si:dkey-90a24.1, transcript variant X4
84. CU207301.2 ENSDARG00000097677 2 0.928 - - - - 0.928 - - - -
85. rgs13 ENSDARG00000017653 8 0.928 - - - - 0.928 - - - - regulator of G protein signaling 13 [Source:ZFIN;Acc:ZDB-GENE-070410-138]
86. zgc:110286 92 0.928 - - - - 0.928 - - - - zgc:110286
87. cpo ENSDARG00000077688 1 0.928 - - - - 0.928 - - - - carboxypeptidase O [Source:ZFIN;Acc:ZDB-GENE-070619-6]
88. si:dkey-263l8.2 si:dkey-263l8.2 3 0.928 - - - - 0.928 - - - -
89. si:dkey-146m20.14 si:dkey-146m20.14 1 0.928 - - - - 0.928 - - - -
90. GRIN3A ENSDARG00000075802 27 0.928 - - - - 0.928 - - - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
91. CT025934.2 CT025934.2 22 0.928 - - - - 0.928 - - - -
92. BX248230.1 BX248230.1 1 0.928 - - - - 0.928 - - - -
93. RAB3IL1 ENSDARG00000007711 11 0.928 - - - - 0.928 - - - - RAB3A interacting protein (rabin3)-like 1 [Source:ZFIN;Acc:ZDB-GENE-110921-5]
94. BX004816.2 ENSDARG00000087012 3 0.928 - - - - 0.928 - - - -
95. CABZ01054391.1 ENSDARG00000103952 2 0.928 - - - - 0.928 - - - - NACHT, LRR and PYD domains-containing protein 12-like [Source:NCBI gene;Acc:100150280]
96. BX649331.1 ENSDARG00000098721 1 0.928 - - - - 0.928 - - - -
97. EGFR EGFR 1 0.928 - - - - 0.928 - - - -
98. BX957311.1 ENSDARG00000097710 1 0.928 - - - - 0.928 - - - -
99. si:dkey-241l7.2 ENSDARG00000105335 6 0.928 - - - - 0.928 - - - - si:dkey-241l7.2 [Source:ZFIN;Acc:ZDB-GENE-041014-240]
100. si:dkey-269o24.7 si:dkey-269o24.7 28 0.928 - - - - 0.928 - - - -

There are 741 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA