Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for syt3

Gene Name Gene ID Reads Annotation
syt3 ENSDARG00000075830 430 synaptotagmin III [Source:ZFIN;Acc:ZDB-GENE-090601-1]










Genes with expression patterns similar to syt3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. syt3 ENSDARG00000075830 430 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 synaptotagmin III [Source:ZFIN;Acc:ZDB-GENE-090601-1]
2. adam23a ENSDARG00000062323 580 3.39 0.760 - - 0.931 - 0.875 0.824 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
3. syngr3a ENSDARG00000014871 405 3.34 0.880 - - 0.968 - 0.737 0.755 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
4. LANCL2 ENSDARG00000045465 1221 3.279 0.799 - - 0.867 - 0.783 0.830 - - LanC lantibiotic synthetase component C-like 2 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-070209-191]
5. mdkb ENSDARG00000020708 5393 3.142 0.845 - - 0.797 - 0.750 0.750 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
6. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 3.142 0.719 - - 0.801 - 0.897 0.725 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
7. ppp1r14ab ENSDARG00000017710, ENSDARG00000110779 3296 3.14 0.802 - - 0.832 - 0.801 0.705 - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1783]
8. pou4f1 ENSDARG00000005559 821 2.676 0.847 - - - - 0.963 0.866 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
9. rbfox3 rbfox3 1443 2.647 0.897 - - - - 0.907 0.843 - -
10. adcyap1b ENSDARG00000027740 1539 2.605 0.873 - - - - 0.901 0.831 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
11. adam11 ENSDARG00000079204 298 2.585 0.934 - - - - 0.930 0.721 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
12. lhx5 ENSDARG00000057936 785 2.577 0.876 - - - - 0.850 0.851 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
13. snap25a ENSDARG00000020609 4537 2.572 0.884 - - - - 0.870 0.818 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
14. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.57 0.898 - - - - 0.892 0.780 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
15. slc32a1 ENSDARG00000059775 1092 2.559 0.867 - - - - 0.889 0.803 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
16. slc1a2b ENSDARG00000102453 3136 2.551 0.846 - - - - 0.909 0.796 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
17. dpysl3 ENSDARG00000002587 4381 2.551 0.904 - - - - 0.827 0.820 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
18. TUBB8P7_1 TUBB8P7_1 2722 2.531 0.771 - - - - 0.878 0.882 - -
19. TUSC5 TUSC5 1436 2.514 0.885 - - - - 0.827 0.802 - -
20. necap1 ENSDARG00000020798 612 2.504 0.808 - - - - 0.837 0.859 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
21. sez6l2 ENSDARG00000076052 360 2.501 0.781 - - - - 0.821 0.899 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
22. fsd1 ENSDARG00000062017 207 2.501 0.909 - - - - 0.866 0.726 - - fibronectin type III and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-218]
23. stmn1b ENSDARG00000033655 9491 2.489 0.908 - - - - 0.744 0.837 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
24. gng3 ENSDARG00000009553 2530 2.489 0.814 - - - - 0.827 0.848 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
25. tuba1c ENSDARG00000055216 8384 2.486 0.812 - - - - 0.831 0.843 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
26. rusc1 ENSDARG00000078125 617 2.479 0.820 - - - - 0.896 0.763 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
27. celf4 ENSDARG00000070045 1537 2.476 0.853 - - - - 0.760 0.863 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
28. st18 663 2.473 - - - 0.930 - 0.701 0.842 - - suppression of tumorigenicity 18, zinc finger
29. nptx1l ENSDARG00000074671 569 2.466 0.831 - - - - 0.795 0.840 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
30. slc1a3a ENSDARG00000104431 9888 2.463 0.833 - - - - 0.836 0.794 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
31. gap43 ENSDARG00000099744 4114 2.458 0.888 - - - - 0.782 0.788 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
32. lhx1a ENSDARG00000014018 958 2.457 0.793 - - - - 0.868 0.796 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
33. MAPK8IP1_1 MAPK8IP1_1 186 2.454 0.846 - - - - 0.870 0.738 - -
34. cspg5a ENSDARG00000069981 1699 2.448 0.836 - - - - 0.767 0.845 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
35. snap25b ENSDARG00000058117 469 2.446 0.768 - - - - 0.914 0.764 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
36. CDK5R1 CDK5R1 562 2.44 - - - 0.965 - 0.744 0.731 - -
37. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.439 0.738 - - - - 0.894 0.807 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
38. Sep-03 Sep-03 1124 2.437 0.739 - - - - 0.908 0.790 - -
39. atp2b3b ENSDARG00000023445 1424 2.436 0.768 - - - - 0.835 0.833 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
40. vgf ENSDARG00000105529 247 2.431 0.752 - - - - 0.830 0.849 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
41. gabra5 ENSDARG00000070730 156 2.431 0.750 - - - - 0.829 0.852 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
42. WNK2 ENSDARG00000104989 429 2.431 - 0.782 - - - 0.804 0.845 - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
43. NPTXR NPTXR 241 2.428 - 0.704 - - - 0.873 0.851 - -
44. pcdh1gc5 ENSDARG00000104826 10052 2.425 0.766 - - - - 0.800 0.859 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
45. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.424 0.795 - - - - 0.786 0.843 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
46. eno2 ENSDARG00000014287 2162 2.423 0.747 - - - 0.827 - 0.849 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
47. atp6ap1a ENSDARG00000041417 898 2.416 0.823 - - 0.884 - - 0.709 - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
48. cers6 ENSDARG00000053583 247 2.415 0.820 - - - - 0.724 0.871 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
49. ATP6AP1L ATP6AP1L 164 2.414 0.733 - - - - 0.833 0.848 - -
50. clstn3 ENSDARG00000073883 590 2.412 0.819 - - - - 0.804 0.789 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
51. NLRP1 NLRP1 54 2.411 - 0.768 - - 0.916 0.727 - - -
52. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.41 0.888 - - - - 0.732 0.790 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
53. nrxn3b ENSDARG00000062693 192 2.41 0.824 - - - - 0.761 0.825 - - neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
54. rab3ab ENSDARG00000043835 1267 2.409 0.759 - - - - 0.792 0.858 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
55. mllt11 ENSDARG00000071026 2518 2.409 0.775 - - - - 0.830 0.804 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
56. cadm3 ENSDARG00000057013 1545 2.407 0.789 - - - - 0.821 0.797 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
57. tmeff1b ENSDARG00000056740 11253 2.407 - - - 0.710 - 0.854 0.843 - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
58. MAP1A MAP1A 847 2.402 0.820 - - - - 0.808 0.774 - -
59. scn8aa ENSDARG00000005775 792 2.401 0.782 - - - - 0.858 0.761 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
60. cdk5r1b ENSDARG00000045087 2075 2.4 0.842 - - - - 0.758 0.800 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
61. pcp4b 1080 2.392 - - - - 0.733 0.781 0.878 - - Purkinje cell protein 4b
62. scg2b ENSDARG00000038574 345 2.389 - - - - 0.853 0.812 0.724 - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
63. slc12a5b ENSDARG00000078187 329 2.388 0.704 - - - - 0.850 0.834 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
64. ckbb ENSDARG00000043257 3503 2.385 0.735 - - - - 0.838 0.812 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
65. stx1b ENSDARG00000000503 2724 2.381 0.759 - - - - 0.785 0.837 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
66. rap2ip rap2ip 681 2.381 0.790 - - - - 0.743 0.848 - -
67. dnajc5aa ENSDARG00000042948 2885 2.372 0.762 - - - - 0.795 0.815 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
68. ndrg4 ENSDARG00000103937 1234 2.372 - - - 0.827 - 0.726 0.819 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
69. negr1 ENSDARG00000021607 1051 2.37 0.852 - - - - 0.793 0.725 - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
70. nrn1a ENSDARG00000071860 1311 2.37 0.791 - - - - 0.743 0.836 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
71. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 2.363 0.768 - - - 0.793 - 0.802 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
72. nova2 ENSDARG00000017673 7685 2.362 0.777 - - - - 0.746 0.839 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
73. stmn2a ENSDARG00000033234 2272 2.356 0.806 - - - - 0.755 0.795 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
74. epha4b ENSDARG00000011600 3110 2.355 0.716 - - - - 0.797 0.842 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
75. zic4 ENSDARG00000031307 1228 2.349 0.792 - - - - 0.798 0.759 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
76. PDZD4 ENSDARG00000090564 131 2.349 0.723 - - - - 0.861 0.765 - - PDZ domain containing 4 [Source:HGNC Symbol;Acc:HGNC:21167]
77. IGLON5 ENSDARG00000022176 1353 2.347 - - - - 0.747 0.806 0.794 - - IgLON family member 5 [Source:HGNC Symbol;Acc:HGNC:34550]
78. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 2.342 0.722 - - - - 0.820 0.800 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
79. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.34 0.772 - - - - 0.782 0.786 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
80. dmrt3a ENSDARG00000035290, ENSDARG00000114587 115 2.337 0.844 - - - - 0.758 0.735 - - doublesex and mab-3 related transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-021220-3]
81. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.333 0.825 - - - - 0.724 0.784 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
82. C8H1orf106 C8H1orf106 2690 2.333 0.733 - - 0.814 - - 0.786 - -
83. scube2 ENSDARG00000037362 2833 2.329 0.799 - - - - 0.796 0.734 - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
84. upf3a ENSDARG00000069297, ENSDARG00000111067 196 2.329 0.733 - - - - 0.752 0.844 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
85. lgi1a ENSDARG00000020493 1218 2.324 0.803 - - - - 0.736 0.785 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
86. scrt2 ENSDARG00000056175 4331 2.321 0.783 - - - - 0.783 0.755 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
87. EPB41L1 EPB41L1 1896 2.319 0.759 - - - - 0.737 0.823 - -
88. marcksa ENSDARG00000004049 2518 2.299 - - - 0.829 - 0.749 0.721 - - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
89. UBE2QL1 ENSDARG00000079276 3474 2.299 0.760 - - 0.721 - - 0.818 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
90. SV2A ENSDARG00000059945 1278 2.299 0.764 - - 0.790 - - 0.745 - - synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
91. spock2 ENSDARG00000075393 791 2.292 0.762 - - - - 0.742 0.788 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
92. CHL1 CHL1 1553 2.285 0.764 - - - - 0.718 0.803 - -
93. trim2b ENSDARG00000076174 250 2.28 0.709 - - - 0.788 - 0.783 - - tripartite motif containing 2b [Source:ZFIN;Acc:ZDB-GENE-090312-70]
94. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 2.278 - - - 0.717 - 0.802 0.759 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
95. SV2B SV2B 208 2.272 0.740 - - - - 0.719 0.813 - -
96. PPP1R9B PPP1R9B 855 2.266 - 0.705 - - - 0.799 0.762 - -
97. elavl4 ENSDARG00000045639 998 2.266 0.715 - - - - 0.704 0.847 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
98. JPH3 ENSDARG00000102204 283 2.264 0.757 - - - - 0.797 0.710 - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
99. gfap ENSDARG00000025301 5584 2.263 0.700 - - - - 0.710 0.853 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
100. nbeaa ENSDARG00000070080 862 2.262 0.712 - - - - 0.751 0.799 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]

There are 2209 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA