Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for syt1a

Gene Name Gene ID Reads Annotation
syt1a ENSDARG00000030614 542 synaptotagmin Ia [Source:ZFIN;Acc:ZDB-GENE-040718-165]










Genes with expression patterns similar to syt1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. syt1a ENSDARG00000030614 542 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 synaptotagmin Ia [Source:ZFIN;Acc:ZDB-GENE-040718-165]
2. barhl1a ENSDARG00000035508, ENSDARG00000110061, ENSDARG00000112355 374 2.332 - - - - - - 0.785 0.843 0.704 BarH-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050417-212]
3. negr1 ENSDARG00000021607 1051 2.33 - 0.879 - - - 0.724 - - 0.727 neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
4. stap2a ENSDARG00000092810 591 1.859 - 0.965 - - - - - 0.894 - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
5. CR352229.2 CR352229.2 784 1.749 - 0.916 - - - - - 0.833 -
6. pkib ENSDARG00000053110 527 1.742 - 0.898 - - - - - 0.844 - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
7. her2 ENSDARG00000038205 3219 1.735 - - - - - 0.899 - 0.836 - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
8. fam86a fam86a 174 1.71 - 0.945 - - - - - 0.765 -
9. tlx2 ENSDARG00000011273 870 1.709 - 0.963 - - - 0.746 - - - T cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020208-1]
10. phactr3a ENSDARG00000058243 150 1.708 - 0.963 - - - 0.745 - - - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
11. BSN BSN 463 1.685 - - - - - 0.879 - - 0.806
12. parp3 ENSDARG00000003961 146 1.685 - 0.896 - - - - 0.789 - - poly (ADP-ribose) polymerase family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7435]
13. ccdc92 ENSDARG00000041750, ENSDARG00000115475 283 1.682 - 0.864 - - - 0.818 - - - coiled-coil domain containing 92 [Source:ZFIN;Acc:ZDB-GENE-051113-120]
14. APBB3 ENSDARG00000053771 654 1.675 - 0.852 - - - - - - 0.823 amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
15. nrg2b ENSDARG00000086585 100 1.672 - 0.945 - - - 0.727 - - - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
16. alkbh3 ENSDARG00000045606, ENSDARG00000097208 169 1.663 0.808 0.855 - - - - - - - alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase [Source:ZFIN;Acc:ZDB-GENE-040801-254]
17. fbxo41 ENSDARG00000078908 95 1.645 0.808 - - - - 0.837 - - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
18. lhx2b ENSDARG00000031222 517 1.64 - - - - - - - 0.815 0.825 LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-051220-1]
19. sh3bgrl2 ENSDARG00000036878 282 1.637 - 0.795 - - - - - 0.842 - SH3 domain binding glutamate-rich protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040704-38]
20. PCYOX1L ENSDARG00000069003 420 1.633 - 0.913 - - - 0.720 - - - prenylcysteine oxidase 1 like [Source:ZFIN;Acc:ZDB-GENE-141212-302]
21. tmem198a ENSDARG00000042115 1694 1.633 - - - - - 0.760 - - 0.873 transmembrane protein 198a [Source:ZFIN;Acc:ZDB-GENE-070912-716]
22. gsx1 ENSDARG00000035735 1243 1.628 - - - - - 0.745 - 0.883 - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
23. bag5 ENSDARG00000017316 195 1.626 - 0.864 - - - - - 0.762 - BCL2 associated athanogene 5 [Source:ZFIN;Acc:ZDB-GENE-050913-58]
24. st6galnac1.2 ENSDARG00000043816 51 1.619 - 0.859 - - - - - 0.760 - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
25. PPP1R9B PPP1R9B 855 1.617 - - - - - 0.793 - 0.824 -
26. fyna ENSDARG00000011370 1679 1.614 - - - - - 0.753 - 0.861 - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
27. phf20l1 ENSDARG00000017427 1001 1.613 - 0.890 - - - - - 0.723 - PHD finger protein 20 like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5837]
28. ptprn2 ENSDARG00000035970, ENSDARG00000114075 354 1.606 0.748 - - - - - - - 0.858 protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3758]
29. arf3b ENSDARG00000036998, ENSDARG00000112366 38 1.602 - 0.900 - - - 0.702 - - - ADP-ribosylation factor 3b [Source:ZFIN;Acc:ZDB-GENE-030616-356]
30. SPTBN4_1 ENSDARG00000092624 473 1.601 - - - - - 0.806 - 0.795 - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
31. kif5c ENSDARG00000076027 424 1.598 - - - - - 0.785 - 0.813 - kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
32. her8.2 ENSDARG00000069675 315 1.588 - 0.817 - - - 0.771 - - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
33. nhlh2 ENSDARG00000025495 1860 1.583 - - - - - 0.837 - - 0.746 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
34. zic6 ENSDARG00000071496 402 1.579 - - - - - 0.740 - 0.839 - zic family member 6 [Source:ZFIN;Acc:ZDB-GENE-061207-1]
35. nf1b ENSDARG00000004184 548 1.579 - 0.838 - - - - - 0.741 - neurofibromin 1b [Source:ZFIN;Acc:ZDB-GENE-091111-4]
36. cspg5a ENSDARG00000069981 1699 1.577 - - - - - 0.781 - 0.796 - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
37. syt12 ENSDARG00000101776 215 1.576 0.736 - - - - 0.840 - - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
38. KHDRBS3 ENSDARG00000101020 408 1.576 - - - - - - - 0.802 0.774 KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
39. grin1a ENSDARG00000027828 1327 1.575 0.735 - - - - 0.840 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
40. zic5 ENSDARG00000016022 1034 1.574 - - - - - - - 0.852 0.722 zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
41. nfia ENSDARG00000062420 573 1.574 - - - - - 0.715 - 0.859 - nuclear factor I/A [Source:ZFIN;Acc:ZDB-GENE-050208-501]
42. g2e3 ENSDARG00000001313 1485 1.556 - 0.826 - - - - 0.730 - - G2/M-phase specific E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030616-400]
43. nlgn4a 102 1.552 - 0.726 - - - 0.826 - - - neuroligin 4a, transcript variant X1
44. celsr1b ENSDARG00000058259 1219 1.547 - - - - - - - 0.818 0.729 cadherin EGF LAG seven-pass G-type receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050823-4]
45. draxin ENSDARG00000058256, ENSDARG00000111676 266 1.545 - - - - - 0.756 - 0.789 - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
46. zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 1.545 - - - - - 0.748 - 0.797 - zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]
47. GADD45G_1 GADD45G_1 236 1.544 - - - - - 0.813 - - 0.731
48. si:dkey-19e4.5 ENSDARG00000089886 2562 1.543 - - - - - 0.707 - 0.836 - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
49. dscamb ENSDARG00000028118 82 1.542 - - - - - 0.786 - - 0.756 Down syndrome cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-031118-67]
50. nell2b ENSDARG00000062797 854 1.541 0.730 - - - - 0.811 - - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
51. epb41a ENSDARG00000099283 860 1.539 - 0.823 - - - 0.716 - - - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
52. dtnbp1b ENSDARG00000055206 64 1.535 0.774 - - - - 0.761 - - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
53. sntb1 ENSDARG00000041729 163 1.534 - 0.784 - - - - - 0.750 - syntrophin, basic 1 [Source:ZFIN;Acc:ZDB-GENE-040704-13]
54. BX322601.2 BX322601.2 297 1.534 - 0.815 - - - - - 0.719 -
55. bcl11ab ENSDARG00000063153 3032 1.533 - 0.803 - - - - - - 0.730 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
56. BX469922.1 BX469922.1 133 1.531 - 0.797 - - - - 0.734 - -
57. zic1 ENSDARG00000015567 2520 1.529 - - - - - - - 0.794 0.735 zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
58. fam184a ENSDARG00000014081 93 1.528 - 0.817 - - - 0.711 - - - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
59. si:ch211-181p13.2 ENSDARG00000096484 94 1.521 - 0.819 - - - 0.702 - - - si:ch211-181p13.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9054]
60. ATP6AP1L_1 ATP6AP1L_1 508 1.519 - 0.768 - - - 0.751 - - -
61. nfasca ENSDARG00000061099, ENSDARG00000109524 275 1.517 - - - - - 0.784 - - 0.733 neurofascin homolog (chicken) a [Source:ZFIN;Acc:ZDB-GENE-080229-6]
62. nfya ENSDARG00000042004, ENSDARG00000114231 6606 1.506 - - - - - 0.752 - 0.754 - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
63. BX927349.2 BX927349.2 325 1.504 - 0.748 - - - - - 0.756 -
64. scn2b ENSDARG00000101713 796 1.504 - - - - - 0.803 - 0.701 - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
65. mmp24 ENSDARG00000018896 178 1.504 - 0.754 - - - 0.750 - - - matrix metallopeptidase 24 [Source:ZFIN;Acc:ZDB-GENE-040724-262]
66. POLE4 ENSDARG00000013016 848 1.5 - - - - - 0.747 - 0.753 - polymerase (DNA-directed), epsilon 4, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-050522-309]
67. csnk1e ENSDARG00000045150, ENSDARG00000112948 288 1.498 - - - - - 0.727 - 0.771 - casein kinase 1, epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-7873]
68. nr2e3 ENSDARG00000045904, ENSDARG00000113178 208 1.497 - - - - - - - 0.788 0.709 nuclear receptor subfamily 2, group E, member 3 [Source:ZFIN;Acc:ZDB-GENE-041114-63]
69. txndc11 ENSDARG00000101291 589 1.494 - 0.728 - - - - - 0.766 - thioredoxin domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-041008-112]
70. pcyt1ba ENSDARG00000058162 206 1.492 - - - - - 0.702 - 0.790 - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
71. trrap ENSDARG00000100623 3429 1.491 - - - - - 0.712 - 0.779 - transformation/transcription domain-associated protein [Source:ZFIN;Acc:ZDB-GENE-050809-47]
72. znf280d ENSDARG00000077013 1387 1.491 - - - - - - - 0.787 0.704 zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
73. dbx1a ENSDARG00000086393 3161 1.49 - - - - - 0.708 - 0.782 - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
74. PPM1J ENSDARG00000074690 109 1.488 0.754 - - - - - 0.734 - - protein phosphatase, Mg2+/Mn2+ dependent, 1J [Source:ZFIN;Acc:ZDB-GENE-091230-9]
75. lzts3b ENSDARG00000058558 166 1.487 0.723 - - - - 0.764 - - - leucine zipper, putative tumor suppressor family member 3b [Source:ZFIN;Acc:ZDB-GENE-110411-249]
76. cln8 ENSDARG00000075525, ENSDARG00000113042 601 1.487 - - - - - 0.710 - 0.777 - CLN8, transmembrane ER and ERGIC protein [Source:ZFIN;Acc:ZDB-GENE-060906-3]
77. sh3glb2a ENSDARG00000008983 452 1.475 - - - - - 0.735 - 0.740 - SH3-domain GRB2-like endophilin B2a [Source:ZFIN;Acc:ZDB-GENE-061201-8]
78. fam43b ENSDARG00000070222 92 1.471 0.713 - - - - 0.758 - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
79. celf3a ENSDARG00000034668 2432 1.471 - - - - - 0.702 - - 0.769 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
80. vezf1a ENSDARG00000008247 1449 1.469 - - - - - - - 0.755 0.714 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
81. ENGASE ENSDARG00000010035 232 1.465 - - - - - 0.709 - 0.756 - endo-beta-N-acetylglucosaminidase [Source:ZFIN;Acc:ZDB-GENE-070112-1332]
82. gclm ENSDARG00000018953 1712 1.456 - 0.721 - - - - - 0.735 - glutamate-cysteine ligase, modifier subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5906]
83. wdr33 ENSDARG00000018272 4076 1.455 - - - - - - - 0.730 0.725 WD repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040924-3]
84. nkrf ENSDARG00000100536 1873 1.453 - - - - - 0.704 - - 0.749 NFKB repressing factor [Source:ZFIN;Acc:ZDB-GENE-030616-73]
85. CU462878.1 ENSDARG00000090072 352 1.453 - 0.732 - - - - - 0.721 - keratinocyte associated protein 3 [Source:NCBI gene;Acc:100538219]
86. dpysl5a ENSDARG00000011141 1827 1.447 - - - - - - - 0.736 0.711 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
87. gstm3 gstm3 1164 1.447 - 0.736 - - - - - 0.711 -
88. cuedc1a ENSDARG00000068716 232 1.445 - - - - - 0.713 - - 0.732 CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
89. dnaja2l ENSDARG00000010745 2367 1.439 - - - - - 0.703 - - 0.736 DnaJ (Hsp40) homolog, subfamily A, member 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-2884]
90. insm1b ENSDARG00000053301 2032 1.435 - - - - - 0.727 - - 0.708 insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
91. cdc25 cdc25 3913 1.424 - - - - - 0.713 - 0.711 -
92. skor1b ENSDARG00000062448, ENSDARG00000112341 282 1.411 0.704 - - - - 0.707 - - - SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]
93. C1H20orf27 C1H20orf27 69 1.411 0.700 - - - - 0.711 - - -
94. taf12 ENSDARG00000104030, ENSDARG00000115004 163 0.984 - 0.984 - - - - - - - TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-031030-5]
95. fmnl2a ENSDARG00000012586 136 0.984 - 0.984 - - - - - - - formin-like 2a [Source:ZFIN;Acc:ZDB-GENE-081105-70]
96. SLC2A13 SLC2A13 74 0.971 - 0.971 - - - - - - -
97. CU104697.1 CU104697.1 19 0.967 - 0.967 - - - - - - -
98. cyb5r4 ENSDARG00000020898 119 0.965 - 0.965 - - - - - - - cytochrome b5 reductase 4 [Source:ZFIN;Acc:ZDB-GENE-050522-225]
99. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 0.965 - 0.965 - - - - - - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
100. BX004890.2 BX004890.2 84 0.965 - 0.965 - - - - - - -

There are 1455 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA