Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for syt11b

Gene Name Gene ID Reads Annotation
syt11b ENSDARG00000056105 578 synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]










Genes with expression patterns similar to syt11b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. syt11b ENSDARG00000056105 578 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
2. otpb ENSDARG00000058379 1143 3.35 0.800 0.974 - - - 0.715 0.861 - - orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
3. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 3.303 0.856 - - - - 0.825 - 0.798 0.824 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
4. C8H1orf106 C8H1orf106 2690 3.212 0.849 0.707 - - - 0.952 - - 0.704
5. mllt11 ENSDARG00000071026 2518 3.154 0.873 - - - - 0.713 - 0.767 0.801 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
6. nadl1.1 1200 3.139 0.868 0.735 - - - 0.807 - - 0.729 neural adhesion molecule L1.1, transcript variant X1
7. cadm3 ENSDARG00000057013 1545 3.133 0.802 0.795 - - - 0.765 - - 0.771 cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
8. rtn1b ENSDARG00000021143 1682 3.084 0.797 0.779 - - - - - 0.781 0.727 reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
9. pax6a ENSDARG00000103379 3061 3.02 0.716 0.716 - - - 0.835 - 0.753 - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
10. nin ENSDARG00000060298 1558 3.01 0.723 - - - - - 0.789 0.765 0.733 ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
11. scn2b ENSDARG00000101713 796 2.732 0.909 0.947 - - - 0.876 - - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
12. dbx2 2971 2.618 0.843 0.880 - - - 0.895 - - - developing brain homeobox 2
13. porcn ENSDARG00000052558, ENSDARG00000111556 110 2.618 0.800 0.974 - - - 0.844 - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
14. GJD2_1 GJD2_1 3045 2.595 0.729 0.974 - - - 0.892 - - -
15. ptf1a ENSDARG00000014479 349 2.587 - 0.974 - - - 0.836 - - 0.777 pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
16. CU179656.1 ENSDARG00000107086 270 2.575 0.778 0.942 - - - 0.855 - - -
17. gng3 ENSDARG00000009553 2530 2.569 0.773 0.929 - - - 0.867 - - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
18. si:ch211-152f6.6 si:ch211-152f6.6 278 2.564 0.747 0.919 - - - 0.898 - - -
19. syt4 ENSDARG00000036505 421 2.553 0.871 0.878 - - - 0.804 - - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
20. NPAS3 ENSDARG00000109820 362 2.548 0.721 0.974 - - - 0.853 - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
21. lhx1a ENSDARG00000014018 958 2.541 - 0.977 - - - 0.824 - - 0.740 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
22. penka ENSDARG00000004869 161 2.535 0.745 0.995 - - - 0.795 - - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
23. stx1b ENSDARG00000000503 2724 2.533 0.890 0.834 - - - 0.809 - - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
24. cacng3b ENSDARG00000076401 91 2.523 0.814 0.974 - - - 0.735 - - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
25. elavl4 ENSDARG00000045639 998 2.516 0.835 - - - - 0.925 - - 0.756 ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
26. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.513 - 0.710 - - - 0.936 - 0.867 - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
27. gad2 ENSDARG00000015537 724 2.505 - 0.926 - - - 0.771 - 0.808 - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
28. sv2bb ENSDARG00000060711 196 2.502 0.865 0.886 - - - 0.751 - - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
29. slc1a2b ENSDARG00000102453 3136 2.502 0.837 0.893 - - - 0.772 - - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
30. inab ENSDARG00000053248 3239 2.5 0.897 - - - - 0.854 - - 0.749 internexin neuronal intermediate filament protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-83]
31. draxin ENSDARG00000058256, ENSDARG00000111676 266 2.499 0.745 0.888 - - - 0.866 - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
32. slc17a6a ENSDARG00000001127 337 2.487 - 0.974 - - - - - 0.747 0.766 solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
33. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 2.483 - 0.751 - - - 0.908 - - 0.824 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
34. vamp2 ENSDARG00000056877 2158 2.48 0.766 - - - - 0.909 - - 0.805 vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
35. MCTP1 MCTP1 219 2.478 0.783 0.952 - - - 0.743 - - -
36. smarca5 ENSDARG00000052348 15433 2.477 - - - - - 0.850 0.838 - 0.789 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
37. GLRA3 ENSDARG00000011066 242 2.476 0.788 0.924 - - - 0.764 - - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
38. pcdh19 ENSDARG00000034344 2378 2.467 - - - - - 0.858 - 0.817 0.792 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
39. her4.3 ENSDARG00000070770 613 2.451 - - - - - 0.889 - 0.802 0.760 hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
40. celf4 ENSDARG00000070045 1537 2.433 0.827 - - - - 0.778 - 0.828 - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
41. C18H15orf59 C18H15orf59 80 2.428 0.748 0.974 - - - 0.706 - - -
42. dpysl3 ENSDARG00000002587 4381 2.428 0.745 - - - - 0.873 - - 0.810 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
43. scn8aa ENSDARG00000005775 792 2.426 0.830 0.768 - - - 0.828 - - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
44. sept5a ENSDARG00000013843 1206 2.421 0.832 - - - - 0.764 - 0.825 - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
45. mybl1 ENSDARG00000030999 158 2.421 - 0.974 - - - - - 0.730 0.717 v-myb avian myeloblastosis viral oncogene homolog-like 1 [Source:ZFIN;Acc:ZDB-GENE-041111-281]
46. tuba1c ENSDARG00000055216 8384 2.42 0.810 - - - - 0.777 - - 0.833 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
47. snap25a ENSDARG00000020609 4537 2.41 0.825 0.853 - - - 0.732 - - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
48. fez1 ENSDARG00000023174 701 2.409 0.846 - - - - - - 0.817 0.746 fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
49. ttc9b ENSDARG00000068421 251 2.408 0.739 0.886 - - - - - 0.783 - tetratricopeptide repeat domain 9B [Source:ZFIN;Acc:ZDB-GENE-050419-67]
50. dnajc5aa ENSDARG00000042948 2885 2.407 0.802 - - - - 0.896 - - 0.709 DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
51. rufy3 ENSDARG00000029692 3031 2.393 - 0.750 - - - 0.833 0.810 - - RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
52. CABZ01111990.1 CABZ01111990.1 4374 2.382 0.712 - - - - 0.902 - 0.768 -
53. nova2 ENSDARG00000017673 7685 2.372 0.721 0.767 - - - 0.884 - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
54. pou3f2a ENSDARG00000070220 817 2.371 - - - - - 0.832 - 0.755 0.784 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
55. tmem35 ENSDARG00000052567 5685 2.369 0.714 - - - - 0.833 - - 0.822 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
56. slc35g2b ENSDARG00000045447 378 2.362 - 0.751 - - - 0.856 - - 0.755 solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
57. gap43 ENSDARG00000099744 4114 2.359 0.829 - - - - 0.716 - - 0.814 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
58. clvs2 ENSDARG00000053122 1390 2.353 0.826 - - - - - - 0.823 0.704 clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
59. nrxn2a ENSDARG00000061454 291 2.35 0.776 0.854 - - - - - - 0.720 neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
60. dpysl4 ENSDARG00000103490 534 2.349 0.760 - - - - - - 0.811 0.778 dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
61. fam57ba ENSDARG00000026875 504 2.34 0.813 - - - - 0.794 - - 0.733 family with sequence similarity 57, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2046]
62. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 2.307 - 0.763 - - - 0.796 - - 0.748 G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
63. nbeaa ENSDARG00000070080 862 2.299 0.711 - - - - 0.839 - - 0.749 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
64. arnt2 ENSDARG00000103697 5731 2.291 - - - - - 0.836 - 0.716 0.739 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
65. adarb1a ENSDARG00000041609 476 2.287 0.763 - - - - - - 0.795 0.729 adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
66. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 2.283 0.775 - - - - - - 0.777 0.731 zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
67. lfng ENSDARG00000037879 11783 2.28 0.707 - - - - 0.833 - - 0.740 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
68. SV2A ENSDARG00000059945 1278 2.28 0.753 - - - - - - 0.790 0.737 synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
69. fzd3a ENSDARG00000021664 1958 2.278 0.756 - - - - 0.759 - - 0.763 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
70. celf3a ENSDARG00000034668 2432 2.268 - - - - - 0.723 - 0.705 0.840 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
71. lgi1a ENSDARG00000020493 1218 2.263 - 0.708 - - - 0.845 - 0.710 - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
72. sh2d3ca ENSDARG00000028099 1037 2.261 - - - - - - 0.789 0.730 0.742 SH2 domain containing 3Ca [Source:ZFIN;Acc:ZDB-GENE-080102-1]
73. whsc1l1 8544 2.257 - - - - - 0.760 - 0.758 0.739 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
74. tuba2 ENSDARG00000045014 1490 2.256 0.735 - - - - - 0.712 - 0.809 tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
75. hmgb3a ENSDARG00000056725 15668 2.25 0.767 - - - - 0.754 - - 0.729 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
76. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 2.228 - - - - - 0.728 - 0.708 0.792 cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
77. jag1a ENSDARG00000030289 1275 2.21 0.704 0.750 - - - 0.756 - - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
78. otx2 766 2.199 - - - - - - 0.709 0.748 0.742 orthodenticle homeobox 2, transcript variant X2
79. si:ch73-21g5.7 ENSDARG00000093156 9412 2.19 0.754 0.730 - - - - - 0.706 - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
80. coe2 coe2 1633 2.173 - - - - - 0.734 - 0.704 0.735
81. ptbp2b ENSDARG00000015901 2458 2.172 0.719 - - - - - - 0.709 0.744 polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
82. fam60al 2846 2.16 0.727 - - - - - - 0.721 0.712 family with sequence similarity 60, member A, like
83. khdrbs2 ENSDARG00000069469 160 1.921 - 0.974 - - - 0.947 - - - KH domain containing, RNA binding, signal transduction associated 2 [Source:ZFIN;Acc:ZDB-GENE-061013-497]
84. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 1.875 - 0.974 - - - 0.901 - - - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
85. SV2B SV2B 208 1.852 0.905 0.947 - - - - - - -
86. zbtb20 ENSDARG00000005586 195 1.852 - 0.974 - - - 0.878 - - - zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
87. zic6 ENSDARG00000071496 402 1.844 - 0.979 - - - 0.865 - - - zic family member 6 [Source:ZFIN;Acc:ZDB-GENE-061207-1]
88. necab2 ENSDARG00000056745, ENSDARG00000110976 304 1.843 0.923 - - - - 0.920 - - - N-terminal EF-hand calcium binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-167]
89. KCNAB2 KCNAB2 129 1.813 0.839 0.974 - - - - - - -
90. sypb ENSDARG00000002230 262 1.8 0.848 - - - - 0.952 - - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
91. tmem179 ENSDARG00000013292 343 1.792 - 0.919 - - - 0.873 - - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
92. TUBB2A TUBB2A 142 1.79 0.816 0.974 - - - - - - -
93. si:ch73-127m5.1 ENSDARG00000060680 253 1.785 - 0.974 - - - 0.811 - - - si:ch73-127m5.1 [Source:ZFIN;Acc:ZDB-GENE-130531-25]
94. scrt2 ENSDARG00000056175 4331 1.784 0.825 0.959 - - - - - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
95. neflb ENSDARG00000012426 298 1.781 - 0.974 - - - 0.807 - - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
96. amph ENSDARG00000007663 599 1.778 0.831 0.947 - - - - - - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
97. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 1.777 0.830 0.947 - - - - - - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
98. nefmb ENSDARG00000043697 2052 1.772 0.857 - - - - 0.915 - - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
99. atp1a3a ENSDARG00000018259 5393 1.771 0.856 - - - - 0.915 - - - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
100. htr3a ENSDARG00000089212 51 1.766 0.792 0.974 - - - - - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]

There are 1851 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA