Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for synm

Gene Name Gene ID Reads Annotation
synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]










Genes with expression patterns similar to synm

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
2. tnc ENSDARG00000021948, ENSDARG00000113518 12162 2.397 - 0.808 - - - 0.864 0.725 - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
3. nudt4a ENSDARG00000057767, ENSDARG00000110626 106 2.35 - 0.705 - - - 0.877 0.768 - - nudix (nucleoside diphosphate linked moiety X)-type motif 4a [Source:ZFIN;Acc:ZDB-GENE-031010-33]
4. slc46a1 ENSDARG00000026149 297 1.983 - - - - 0.999 0.984 - - - solute carrier family 46 (folate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1012]
5. gabpb2a ENSDARG00000007943 1570 1.951 - - - - 0.997 0.954 - - - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
6. MARK3 MARK3 1767 1.887 - - - - 0.991 - - 0.896 -
7. nfyba ENSDARG00000039185 1804 1.874 - - - - 0.974 0.900 - - - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
8. errfi1 errfi1 979 1.857 - 0.858 - - 0.999 - - - -
9. kctd2 ENSDARG00000025875, ENSDARG00000114216 802 1.852 - - - - - 0.933 - 0.919 - potassium channel tetramerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-85]
10. hcfc1b ENSDARG00000012519 3633 1.819 - - - - 0.975 0.844 - - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
11. CU013533.1 CU013533.1 108 1.807 - - - - - 0.940 0.867 - -
12. rfc5 ENSDARG00000035634 974 1.797 - 0.802 - - 0.995 - - - - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
13. srcap ENSDARG00000005236 1740 1.796 - - - - 0.992 0.804 - - - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
14. sox9b ENSDARG00000043923 5375 1.78 - 0.807 - - 0.973 - - - - SRY (sex determining region Y)-box 9b [Source:ZFIN;Acc:ZDB-GENE-001103-2]
15. CDA 491 1.76 - 0.837 - - - 0.923 - - - cytidine deaminase
16. CR407547.1 ENSDARG00000117572 41 1.758 - 0.783 - - - 0.975 - - -
17. slc38a5a ENSDARG00000009901 2527 1.748 - - - - 0.985 0.763 - - - solute carrier family 38, member 5a [Source:ZFIN;Acc:ZDB-GENE-081105-92]
18. nrp1b ENSDARG00000027290 170 1.747 - 0.766 - - - 0.981 - - - neuropilin 1b [Source:ZFIN;Acc:ZDB-GENE-040611-1]
19. wdr43 ENSDARG00000077264 1992 1.737 - - - - 0.996 0.741 - - - WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
20. opn4.1 ENSDARG00000007553 66 1.727 0.744 - - - - 0.983 - - - opsin 4.1 [Source:ZFIN;Acc:ZDB-GENE-030314-2]
21. SB:CB827 SB:CB827 245 1.727 - - - - - 0.963 0.764 - -
22. rab14_1 ENSDARG00000074246 481 1.724 - 0.808 - - - 0.916 - - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
23. AL929252.1 AL929252.1 81 1.722 0.807 - - - - 0.915 - - -
24. si:dkey-30k6.5 ENSDARG00000057238 617 1.721 - - - - 0.999 - - 0.722 - si:dkey-30k6.5 [Source:ZFIN;Acc:ZDB-GENE-091204-299]
25. deptor ENSDARG00000040930 191 1.721 - - - - - 0.803 0.918 - - DEP domain containing MTOR-interacting protein [Source:ZFIN;Acc:ZDB-GENE-061013-453]
26. cdk10 ENSDARG00000034256 166 1.718 0.823 - - - - 0.895 - - - cyclin-dependent kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050417-94]
27. DENND6A DENND6A 648 1.716 - 0.868 - - - 0.848 - - -
28. si:dkey-70e17.2 si:dkey-70e17.2 371 1.715 - 0.716 - - 0.999 - - - -
29. hey1 ENSDARG00000070538 986 1.707 - - - - 0.990 0.717 - - - hes-related family bHLH transcription factor with YRPW motif 1 [Source:ZFIN;Acc:ZDB-GENE-000607-70]
30. CR361563.1 CR361563.1 1355 1.706 - 0.714 - - 0.992 - - - -
31. si:dkey-22o22.2 ENSDARG00000102445 149 1.704 - - - - - 0.989 - 0.715 - si:dkey-22o22.2 [Source:ZFIN;Acc:ZDB-GENE-100922-84]
32. DBNDD2 DBNDD2 216 1.697 - 0.790 - - - - 0.907 - -
33. phf2 ENSDARG00000018691 3341 1.692 - - - - 0.982 0.710 - - - PHD finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-050302-10]
34. DACT3_1 DACT3_1 1235 1.676 - 0.782 - - - 0.894 - - -
35. EXO5 ENSDARG00000042727, ENSDARG00000111772 282 1.676 - - - - - 0.928 - 0.748 - exonuclease 5 [Source:ZFIN;Acc:ZDB-GENE-051113-108]
36. nol12 ENSDARG00000038027 2288 1.676 - 0.710 - - 0.966 - - - - nucleolar protein 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1035]
37. hiat1b ENSDARG00000043055 757 1.675 - - - - - 0.946 - 0.729 - hippocampus abundant transcript 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2935]
38. si:ch211-240g9.1 36 1.669 0.703 - - - - 0.966 - - - si:ch211-240g9.1
39. fam96b 2255 1.669 - 0.750 - - - 0.919 - - - family with sequence similarity 96, member B
40. MSL1_1 MSL1_1 2365 1.664 - - - - - 0.919 - 0.745 -
41. dnttip2 ENSDARG00000057648 2381 1.661 - - - - 0.959 - - 0.702 - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
42. loh12cr1 loh12cr1 346 1.65 - - - - - 0.825 0.825 - -
43. xkr6 xkr6 286 1.644 - 0.710 - - - 0.934 - - -
44. daxx ENSDARG00000000729 734 1.644 - - - - - 0.929 - 0.715 - death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
45. zhx2 zhx2 365 1.641 - - - - - 0.906 - 0.735 -
46. CU929431.1 CU929431.1 2234 1.638 - - - - - 0.747 - 0.891 -
47. si:dkey-10f21.16 si:dkey-10f21.16 252 1.634 - 0.748 - - - 0.886 - - -
48. cplx4c ENSDARG00000094889 253 1.63 - - - - - 0.861 - 0.769 - complexin 4c [Source:ZFIN;Acc:ZDB-GENE-101018-1]
49. si:ch211-208h1.1 si:ch211-208h1.1 262 1.628 - 0.775 - - - 0.853 - - -
50. ndufa5 ENSDARG00000039346 2617 1.627 - 0.843 - - - - - 0.784 - NADH:ubiquinone oxidoreductase subunit A5 [Source:ZFIN;Acc:ZDB-GENE-050320-17]
51. epha3l epha3l 1441 1.624 - 0.771 - - - - - 0.853 -
52. ruvbl1 ENSDARG00000002591 2381 1.618 - 0.806 - - - 0.812 - - - RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
53. hspb11 ENSDARG00000002204 879 1.617 - 0.835 - - - 0.782 - - - heat shock protein, alpha-crystallin-related, b11 [Source:ZFIN;Acc:ZDB-GENE-030131-5148]
54. acad8 ENSDARG00000042658, ENSDARG00000116771 259 1.616 - 0.868 - - - 0.748 - - - acyl-CoA dehydrogenase family, member 8 [Source:ZFIN;Acc:ZDB-GENE-040426-828]
55. kansl3 ENSDARG00000029556 2487 1.615 - - - - - 0.809 - 0.806 - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
56. vhl ENSDARG00000070617 663 1.605 - - - - - 0.841 - 0.764 - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
57. pknox1.1_1 ENSDARG00000018765 203 1.604 - 0.740 - - - 0.864 - - - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
58. syt9a ENSDARG00000003994 298 1.604 - - - - - 0.872 - 0.732 - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
59. lmbrd1 ENSDARG00000104223 924 1.604 - - - - - 0.864 0.740 - - LMBR1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041212-36]
60. ctnnd2b ENSDARG00000003779 964 1.602 - 0.714 - - - - - 0.888 - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
61. ptrfb ptrfb 567 1.601 - 0.761 - - - 0.840 - - -
62. tnika ENSDARG00000056218 728 1.6 - 0.709 - - - 0.891 - - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
63. ift57 ENSDARG00000021022 288 1.599 - 0.762 - - - 0.837 - - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
64. C2H1orf27 245 1.593 - 0.832 - - - - - 0.761 - c2h1orf27 homolog (H. sapiens), transcript variant X1
65. gtf3c3 ENSDARG00000043247 202 1.593 - - - - - 0.831 - 0.762 - general transcription factor IIIC, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040914-80]
66. smyd1b ENSDARG00000091253 4964 1.587 - 0.706 - - 0.881 - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
67. C19H9orf91 C19H9orf91 249 1.575 0.811 - - - - - - 0.764 -
68. mc1r ENSDARG00000020237 108 1.562 0.831 - - - - 0.731 - - - melanocortin 1 receptor [Source:ZFIN;Acc:ZDB-GENE-030502-1]
69. lrrc47 ENSDARG00000053138 417 1.561 - - - - - 0.738 0.823 - - leucine rich repeat containing 47 [Source:ZFIN;Acc:ZDB-GENE-060503-289]
70. CABZ01085858.1 CABZ01085858.1 355 1.56 - 0.732 - - - 0.828 - - -
71. hpca ENSDARG00000018397, ENSDARG00000110115 3866 1.554 - 0.733 - - - 0.821 - - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
72. si:ch211-214b16.4 ENSDARG00000074345 261 1.553 - 0.846 - - - 0.707 - - - si:ch211-214b16.4 [Source:ZFIN;Acc:ZDB-GENE-081105-53]
73. CABZ01066957.1 CABZ01066957.1 161 1.551 - - - - - 0.787 - 0.764 -
74. kat6b ENSDARG00000055429 625 1.545 0.708 - - - - - - 0.837 - K(lysine) acetyltransferase 6B [Source:ZFIN;Acc:ZDB-GENE-000607-52]
75. PLEKHM3 ENSDARG00000030633 496 1.535 - 0.779 - - - 0.756 - - - pleckstrin homology domain containing, family M, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-382]
76. sirt1 ENSDARG00000068064 1393 1.514 - - - - - 0.781 - 0.733 - sirtuin 1 [Source:ZFIN;Acc:ZDB-GENE-070801-2]
77. zcchc10 ENSDARG00000091092 1333 1.514 - - - - - 0.771 - 0.743 - zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
78. gtf3c2 ENSDARG00000004574 153 1.512 - 0.743 - - - - - 0.769 - general transcription factor IIIC, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-041014-349]
79. ttll7 ENSDARG00000062973 519 1.508 - 0.789 - - - - - 0.719 - tubulin tyrosine ligase-like family, member 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2112]
80. C16H8orf76 C16H8orf76 329 1.504 - - - - - - 0.758 0.746 -
81. oat ENSDARG00000078425 657 1.501 - 0.770 - - - - 0.731 - - ornithine aminotransferase [Source:ZFIN;Acc:ZDB-GENE-110411-148]
82. mxra8a ENSDARG00000062222 530 1.5 - 0.772 - - - - 0.728 - - matrix-remodelling associated 8a [Source:ZFIN;Acc:ZDB-GENE-060503-671]
83. CU929133.1 CU929133.1 94 1.497 - - - - - 0.759 0.738 - -
84. fbxl2 ENSDARG00000012135 577 1.495 - - - - - 0.764 - 0.731 - F-box and leucine-rich repeat protein 2 [Source:ZFIN;Acc:ZDB-GENE-030925-12]
85. nrxn2a ENSDARG00000061454 291 1.494 - - - - - 0.791 - 0.703 - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
86. saal1 ENSDARG00000018681, ENSDARG00000109471 480 1.49 - 0.729 - - - - - 0.761 - serum amyloid A-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-725]
87. rnd2 ENSDARG00000070735, ENSDARG00000114884 291 1.481 0.741 0.740 - - - - - - - Rho family GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030616-177]
88. st8sia4 ENSDARG00000103600 198 1.48 - - - - - 0.721 0.759 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-060322-10]
89. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 1.48 - 0.722 - - - - - 0.758 - neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
90. itga11a ENSDARG00000036086, ENSDARG00000111495 254 1.476 - - - - - 0.721 0.755 - - integrin, alpha 11a [Source:ZFIN;Acc:ZDB-GENE-050324-1]
91. enoph1 ENSDARG00000026198, ENSDARG00000111634, ENSDARG00000114318 1305 1.471 - - - - - 0.740 - 0.731 - enolase-phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-73]
92. DEAF1 ENSDARG00000088844 380 1.469 - 0.721 - - - - 0.748 - - DEAF1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-081022-163]
93. gch2 ENSDARG00000099101 45623 1.465 - 0.745 - - - - - 0.720 - GTP cyclohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-001205-3]
94. nf1b ENSDARG00000004184 548 1.464 - - - - - 0.735 - 0.729 - neurofibromin 1b [Source:ZFIN;Acc:ZDB-GENE-091111-4]
95. plecb ENSDARG00000021987 13621 1.462 - 0.750 - - 0.712 - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
96. sh3bgrl2 ENSDARG00000036878 282 1.455 - - - - - 0.755 - 0.700 - SH3 domain binding glutamate-rich protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040704-38]
97. CU467832.1 CU467832.1 635 1.455 - 0.707 - - - 0.748 - - -
98. PHTF2 ENSDARG00000102123, ENSDARG00000114503 898 1.454 - - - - - 0.717 0.737 - - putative homeodomain transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-040711-4]
99. CU459160.2 CU459160.2 282 1.452 - 0.720 - - - 0.732 - - -
100. bcl9 ENSDARG00000036687 1124 1.451 - 0.713 - - - 0.738 - - - B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]

There are 2007 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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