Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for syne3

Gene Name Gene ID Reads Annotation
syne3 ENSDARG00000023237 23 spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]










Genes with expression patterns similar to syne3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. syne3 ENSDARG00000023237 23 8 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
2. GMNC ENSDARG00000068719 28 2 - - - - - 1.000 1.000 - - geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
3. CABZ01088134.1 ENSDARG00000033587 4 2 - - - - - 1.000 1.000 - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
4. tpbgl ENSDARG00000114338 5 2 - - - - - 1.000 1.000 - - trophoblast glycoprotein-like [Source:ZFIN;Acc:ZDB-GENE-120209-2]
5. zgc:158432 ENSDARG00000067806, ENSDARG00000109239 4 2 - - - - - 1.000 1.000 - - zgc:158432 [Source:ZFIN;Acc:ZDB-GENE-061201-57]
6. TRIM35_1 TRIM35_1 11 2 - - - - - 1.000 1.000 - -
7. nceh1a ENSDARG00000020427 35 2 - - - - - 1.000 1.000 - - neutral cholesterol ester hydrolase 1a [Source:ZFIN;Acc:ZDB-GENE-040711-2]
8. psme2 ENSDARG00000033144 3 2 - - - - - 1.000 - 1.000 - proteasome activator subunit 2 [Source:ZFIN;Acc:ZDB-GENE-991110-16]
9. GSC2 GSC2 3 1.986 - - - - - - 1.000 - 0.986
10. tmem168b ENSDARG00000062168 17 1.942 - - - - - 1.000 - - 0.942 transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
11. cx32.3 ENSDARG00000041787 33 1.855 - - - - - 0.907 0.948 - - connexin 32.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1337]
12. tuba7l ENSDARG00000104643 33 1.83 - - - - - - 1.000 - 0.830 tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
13. BX323882.1 ENSDARG00000101656 2 1.83 - - - - - - 1.000 - 0.830 butyrophilin subfamily 2 member A2-like [Source:NCBI gene;Acc:563995]
14. BX511066.3 BX511066.3 1 1.83 - - - - - - - 1.000 0.830
15. retsatl ENSDARG00000034989 41 1.83 - - - - - - 1.000 - 0.830 retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
16. mir142a 20 1.83 - - - - - 1.000 - - 0.830 microRNA 142a
17. C1S_1 C1S_1 11 1.83 - - - - - - 1.000 - 0.830
18. vax1 ENSDARG00000021916, ENSDARG00000114230 152 1.818 - - - - - - 1.000 - 0.818 ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
19. CT030712.1 ENSDARG00000044355 83 1.795 0.795 - - - - - 1.000 - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
20. si:dkey-9p20.24 si:dkey-9p20.24 4 1.786 - - - - 0.786 - 1.000 - -
21. bmpr1aa ENSDARG00000019728, ENSDARG00000115025 49 1.762 - - - - - 0.762 1.000 - - bone morphogenetic protein receptor, type IAa [Source:ZFIN;Acc:ZDB-GENE-000502-1]
22. grn1 ENSDARG00000089362 20 1.762 - - - - - 0.762 1.000 - - granulin 1 [Source:ZFIN;Acc:ZDB-GENE-060103-1]
23. msgn1 ENSDARG00000070546 188 1.745 - - - - - 1.000 0.745 - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
24. def8 ENSDARG00000068208 50 1.742 - - - - - 0.742 1.000 - - differentially expressed in FDCP 8 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041114-96]
25. ELFN2 ELFN2 7 1.742 - - - - - 0.742 1.000 - -
26. VOPP1 ENSDARG00000076373 12 1.706 - - - - - 1.000 - 0.706 - VOPP1, WBP1/VOPP1 family member [Source:ZFIN;Acc:ZDB-GENE-091204-64]
27. dyx1c1 dyx1c1 36 1.703 - - - - - 0.873 - - 0.830
28. CT573239.1 ENSDARG00000105292 247 1.636 - 0.877 - - - - 0.759 - - si:ch73-112j3.1 [Source:NCBI gene;Acc:101883515]
29. ccdc88b ENSDARG00000076189 123 1.628 - 0.898 - - - - 0.730 - - coiled-coil domain containing 88B [Source:ZFIN;Acc:ZDB-GENE-080303-31]
30. tpd52l1 ENSDARG00000042548 61 1.589 - - - - - 0.823 0.766 - - tumor protein D52-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-121]
31. dbpb ENSDARG00000057652, ENSDARG00000116703 71 1.547 - - - - - 0.742 0.805 - - D site albumin promoter binding protein b [Source:ZFIN;Acc:ZDB-GENE-100922-6]
32. CU694368.1 CU694368.1 56 1.506 - - - - - 0.787 0.719 - -
33. fnbp1l ENSDARG00000020131 79 1.463 0.727 - - - - - 0.736 - - formin binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040801-155]
34. chmp6b ENSDARG00000102024 37 1 - - - - - - 1.000 - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
35. si:dkey-30j10.5 ENSDARG00000093186 13 1 - - - - - - 1.000 - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
36. aqp9b ENSDARG00000053480 16 1 - - - - - 1.000 - - - aquaporin 9b [Source:ZFIN;Acc:ZDB-GENE-070911-1]
37. zmat4b ENSDARG00000061419 7 1 - - - - - - 1.000 - - zinc finger, matrin-type 4b [Source:ZFIN;Acc:ZDB-GENE-091118-68]
38. gcnt4b ENSDARG00000077550 2 1 - - - - - - 1.000 - - glucosaminyl (N-acetyl) transferase 4, core 2, b [Source:ZFIN;Acc:ZDB-GENE-091118-69]
39. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1 - - - - - 1.000 - - - solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
40. si:dkey-114e9.1 si:dkey-114e9.1 233 1 - - - - - - 1.000 - -
41. zgc:113355 zgc:113355 2 1 - - - - - - - - 1.000
42. si:ch211-235f1.3 ENSDARG00000095179 27 1 - - - - - - 1.000 - - si:ch211-235f1.3 [Source:ZFIN;Acc:ZDB-GENE-091204-440]
43. si:dkey-285e18.3 si:dkey-285e18.3 10 1 - - - - - 1.000 - - -
44. rhobtb2b ENSDARG00000089340 4 1 - - - - - - 1.000 - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
45. BX511266.1 BX511266.1 21 1 - - - - - - 1.000 - -
46. spef2 ENSDARG00000098330 59 1 - - - - - 1.000 - - - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
47. CABZ01080074.1 ENSDARG00000076371 0 1 - - - - - - 1.000 - - shroom family member 2b [Source:NCBI gene;Acc:556551]
48. CR790369.2 CR790369.2 0 1 - - - - - - 1.000 - -
49. med8 ENSDARG00000114425 7 1 - - - - - - 1.000 - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
50. si:dkey-253d23.8 ENSDARG00000094427 26 1 - - - - - - 1.000 - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
51. rab14l ENSDARG00000035188 18 1 - - - - - 1.000 - - - RAB14, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-040426-1207]
52. zte25 zte25 29 1 - - - - - - 1.000 - -
53. zgc:194551 ENSDARG00000114948, ENSDARG00000115221 24 1 - - - - - - 1.000 - - zgc:194551 [Source:ZFIN;Acc:ZDB-GENE-030131-4878]
54. itgb1b ENSDARG00000104484 51 1 - - - - - 1.000 - - - integrin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-030909-10]
55. FAM188B2 4 1 - - - - - - 1.000 - - family with sequence similarity 188, member B2
56. si:dkey-114b16.5 si:dkey-114b16.5 5 1 - - - - - 1.000 - - -
57. zgc:113426 ENSDARG00000051793 37 1 - - - - - - 1.000 - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]
58. TULP1 TULP1 50 1 - - - - - - 1.000 - -
59. BX537113.1_1 BX537113.1_1 3 1 - - - - - 1.000 - - -
60. CABZ01074946.1 CABZ01074946.1 119 1 - - - - - 1.000 - - -
61. opn4a ENSDARG00000022098, ENSDARG00000110010 3 1 - - - - - - 1.000 - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
62. zgc:173577 ENSDARG00000098923 71 1 - - - - - - 1.000 - - zgc:173577 [Source:ZFIN;Acc:ZDB-GENE-071004-55]
63. si:dkey-93l1.4 ENSDARG00000094927 0 1 - - - - - 1.000 - - - si:dkey-93l1.4 [Source:ZFIN;Acc:ZDB-GENE-090311-20]
64. ak7b ENSDARG00000017023 25 1 - - - - - - 1.000 - - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
65. si:ch211-191a16.3 si:ch211-191a16.3 31 1 - - - - - - 1.000 - -
66. AL954132.1 AL954132.1 1 1 - - - - - - 1.000 - -
67. si:dkey-85k15.4 ENSDARG00000095047 25 1 - - - - - - 1.000 - - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]
68. ftr76 ENSDARG00000076093 1 1 - - - - - 1.000 - - - finTRIM family, member 76 [Source:ZFIN;Acc:ZDB-GENE-090508-15]
69. plac8l1 ENSDARG00000069031 161 1 - - - - - - 1.000 - - PLAC8-like 1 [Source:ZFIN;Acc:ZDB-GENE-091204-165]
70. kcnh1a ENSDARG00000024167 9 1 - - - - - - 1.000 - - potassium voltage-gated channel, subfamily H (eag-related), member 1a [Source:ZFIN;Acc:ZDB-GENE-061226-1]
71. RP1 ENSDARG00000077687 6 1 - - - - - 1.000 - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
72. zymnd12 17 1 - - - - - 1.000 - - - zinc finger, MYND-type containing 12, transcript variant X1
73. ENSDARG00000029117 ENSDARG00000029117 80 1 - - - - - - 1.000 - -
74. impact ENSDARG00000043288 7 1 - - - - - 1.000 - - - impact RWD domain protein [Source:ZFIN;Acc:ZDB-GENE-040927-10]
75. si:dkey-119p2.1 si:dkey-119p2.1 1 1 - - - - - - 1.000 - -
76. TTC29 ENSDARG00000058885, ENSDARG00000112776 1 1 - - - - - 1.000 - - - tetratricopeptide repeat domain 29 [Source:ZFIN;Acc:ZDB-GENE-100922-181]
77. ms4a17a.2 ENSDARG00000105674 32 1 - - - - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
78. irak3 ENSDARG00000053131 16 1 - - - - - 1.000 - - - interleukin-1 receptor-associated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-710]
79. irf10 ENSDARG00000027658 7 1 - - - - - - 1.000 - - interferon regulatory factor 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2084]
80. cysltr1 ENSDARG00000058246, ENSDARG00000116295 25 1 - - - - - - 1.000 - - cysteinyl leukotriene receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-250]
81. manba ENSDARG00000008238 25 1 - - - - - - 1.000 - - mannosidase, beta A, lysosomal [Source:ZFIN;Acc:ZDB-GENE-040426-721]
82. RBBP6_10 RBBP6_10 0 1 - - - - - - 1.000 - -
83. tph2 ENSDARG00000057239, ENSDARG00000109777 55 1 - - - - - - 1.000 - - tryptophan hydroxylase 2 (tryptophan 5-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-040624-4]
84. CU633479.6 ENSDARG00000116146 4 1 - - - - - - 1.000 - -
85. abcc12 ENSDARG00000013050 27 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 12 [Source:ZFIN;Acc:ZDB-GENE-050517-25]
86. pnp6 ENSDARG00000040942, ENSDARG00000114753 10 1 - - - - - - 1.000 - - purine nucleoside phosphorylase 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1800]
87. crfb16 ENSDARG00000075181 40 1 - - - - - - 1.000 - - cytokine receptor family member B16 [Source:ZFIN;Acc:ZDB-GENE-071120-9]
88. si:dkey-24i24.3 ENSDARG00000088452 27 1 - - - - - 1.000 - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
89. sytl5 ENSDARG00000062135 11 1 - - - - - 1.000 - - - synaptotagmin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070912-424]
90. cacna1f cacna1f 1 1 - - - - - 1.000 - - -
91. AP5Z1 ENSDARG00000078111 91 1 - - - - - - 1.000 - - adaptor related protein complex 5 subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-120508-2]
92. epha8 22 1 - - - - - - 1.000 - - eph receptor A8
93. epb41l3b ENSDARG00000019917 9 1 - - - - - 1.000 - - - erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
94. RNaseP_nuc_1 RNaseP_nuc_1 19 1 - - - - - - 1.000 - -
95. MAL2_1 MAL2_1 6 1 - - - - - - 1.000 - -
96. SLC7A8 SLC7A8 25 1 - - - - - - 1.000 - -
97. ANKRD27 ENSDARG00000089207 3 1 - - - - - 1.000 - - - ankyrin repeat domain 27 (VPS9 domain) [Source:ZFIN;Acc:ZDB-GENE-121105-1]
98. OVOL1 75 1 - - - - - - 1.000 - - ovo-like zinc finger 1, transcript variant X1
99. si:ch211-196g2.7 si:ch211-196g2.7 0 1 - - - - - - 1.000 - -
100. lyve1b ENSDARG00000062483 14 1 - - - - - - 1.000 - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]

There are 922 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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