Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for syne3

Gene Name Gene ID Reads Annotation
syne3 ENSDARG00000023237 23 spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]










Genes with expression patterns similar to syne3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. syne3 ENSDARG00000023237 23 8 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
2. TRIM35_1 TRIM35_1 11 2 - - - - - 1.000 1.000 - -
3. tpbgl ENSDARG00000114338 5 2 - - - - - 1.000 1.000 - - trophoblast glycoprotein-like [Source:ZFIN;Acc:ZDB-GENE-120209-2]
4. nceh1a ENSDARG00000020427 35 2 - - - - - 1.000 1.000 - - neutral cholesterol ester hydrolase 1a [Source:ZFIN;Acc:ZDB-GENE-040711-2]
5. GMNC ENSDARG00000068719 28 2 - - - - - 1.000 1.000 - - geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
6. zgc:158432 ENSDARG00000067806, ENSDARG00000109239 4 2 - - - - - 1.000 1.000 - - zgc:158432 [Source:ZFIN;Acc:ZDB-GENE-061201-57]
7. psme2 ENSDARG00000033144 3 2 - - - - - 1.000 - 1.000 - proteasome activator subunit 2 [Source:ZFIN;Acc:ZDB-GENE-991110-16]
8. CABZ01088134.1 ENSDARG00000033587 4 2 - - - - - 1.000 1.000 - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
9. GSC2 GSC2 3 1.986 - - - - - - 1.000 - 0.986
10. tmem168b ENSDARG00000062168 17 1.942 - - - - - 1.000 - - 0.942 transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
11. cx32.3 ENSDARG00000041787 33 1.855 - - - - - 0.907 0.948 - - connexin 32.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1337]
12. BX323882.1 ENSDARG00000101656 2 1.83 - - - - - - 1.000 - 0.830 butyrophilin subfamily 2 member A2-like [Source:NCBI gene;Acc:563995]
13. mir142a 20 1.83 - - - - - 1.000 - - 0.830 microRNA 142a
14. BX511066.3 BX511066.3 1 1.83 - - - - - - - 1.000 0.830
15. tuba7l ENSDARG00000104643 33 1.83 - - - - - - 1.000 - 0.830 tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
16. retsatl ENSDARG00000034989 41 1.83 - - - - - - 1.000 - 0.830 retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
17. C1S_1 C1S_1 11 1.83 - - - - - - 1.000 - 0.830
18. vax1 ENSDARG00000021916, ENSDARG00000114230 152 1.818 - - - - - - 1.000 - 0.818 ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
19. CT030712.1 ENSDARG00000044355 83 1.795 0.795 - - - - - 1.000 - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
20. si:dkey-9p20.24 si:dkey-9p20.24 4 1.786 - - - - 0.786 - 1.000 - -
21. grn1 ENSDARG00000089362 20 1.762 - - - - - 0.762 1.000 - - granulin 1 [Source:ZFIN;Acc:ZDB-GENE-060103-1]
22. bmpr1aa ENSDARG00000019728, ENSDARG00000115025 49 1.762 - - - - - 0.762 1.000 - - bone morphogenetic protein receptor, type IAa [Source:ZFIN;Acc:ZDB-GENE-000502-1]
23. msgn1 ENSDARG00000070546 188 1.745 - - - - - 1.000 0.745 - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
24. ELFN2 ELFN2 7 1.742 - - - - - 0.742 1.000 - -
25. def8 ENSDARG00000068208 50 1.742 - - - - - 0.742 1.000 - - differentially expressed in FDCP 8 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041114-96]
26. VOPP1 ENSDARG00000076373 12 1.706 - - - - - 1.000 - 0.706 - VOPP1, WBP1/VOPP1 family member [Source:ZFIN;Acc:ZDB-GENE-091204-64]
27. dyx1c1 dyx1c1 36 1.703 - - - - - 0.873 - - 0.830
28. CT573239.1 ENSDARG00000105292 247 1.636 - 0.877 - - - - 0.759 - - si:ch73-112j3.1 [Source:NCBI gene;Acc:101883515]
29. ccdc88b ENSDARG00000076189 123 1.628 - 0.898 - - - - 0.730 - - coiled-coil domain containing 88B [Source:ZFIN;Acc:ZDB-GENE-080303-31]
30. tpd52l1 ENSDARG00000042548 61 1.589 - - - - - 0.823 0.766 - - tumor protein D52-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-121]
31. dbpb ENSDARG00000057652, ENSDARG00000116703 71 1.547 - - - - - 0.742 0.805 - - D site albumin promoter binding protein b [Source:ZFIN;Acc:ZDB-GENE-100922-6]
32. CU694368.1 CU694368.1 56 1.506 - - - - - 0.787 0.719 - -
33. fnbp1l ENSDARG00000020131 79 1.463 0.727 - - - - - 0.736 - - formin binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040801-155]
34. nudt4b ENSDARG00000045878 10 1 - - - - - - 1.000 - - nudix (nucleoside diphosphate linked moiety X)-type motif 4b [Source:ZFIN;Acc:ZDB-GENE-040912-79]
35. CU861664.1 CU861664.1 53 1 - - - - - 1.000 - - -
36. itln1 ENSDARG00000007534 8 1 - - - - - 1.000 - - - intelectin 1 [Source:ZFIN;Acc:ZDB-GENE-060929-564]
37. AP5Z1 ENSDARG00000078111 91 1 - - - - - - 1.000 - - adaptor related protein complex 5 subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-120508-2]
38. mipol1 ENSDARG00000104845 6 1 - - - - - - 1.000 - - mirror-image polydactyly 1 [Source:ZFIN;Acc:ZDB-GENE-030131-41]
39. BX649292.1 ENSDARG00000092686 1 1 - - - - - - 1.000 - -
40. scn1a 8 1 - - - - - 1.000 - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
41. impact ENSDARG00000043288 7 1 - - - - - 1.000 - - - impact RWD domain protein [Source:ZFIN;Acc:ZDB-GENE-040927-10]
42. si:dkey-276l13.3 si:dkey-276l13.3 8 1 - - - - - - 1.000 - -
43. DLK1 60 1 - - - - - - 1.000 - - delta like non-canonical Notch ligand 1
44. SIRT4 ENSDARG00000010415 118 1 - - - - - - 1.000 - - sirtuin 4 [Source:ZFIN;Acc:ZDB-GENE-041010-65]
45. prlrb ENSDARG00000045955 12 1 - - - - - - 1.000 - - prolactin receptor b [Source:ZFIN;Acc:ZDB-GENE-070705-155]
46. zgc:55413 79 1 - - - - - 1.000 - - - zgc:55413
47. CR848763.1 CR848763.1 9 1 - - - - - 1.000 - - -
48. LRRC2 LRRC2 23 1 - - - - - - 1.000 - -
49. lyve1b ENSDARG00000062483 14 1 - - - - - - 1.000 - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
50. themis ENSDARG00000010619 5 1 - - - - - - 1.000 - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
51. LOXL2 LOXL2 2 1 - - - - - 1.000 - - -
52. VDAC3 ENSDARG00000003695 34 1 - - - - - - 1.000 - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
53. si:rp71-1f1.6 ENSDARG00000110278 0 1 - - - - - - 1.000 - - si:rp71-1f1.6 [Source:ZFIN;Acc:ZDB-GENE-040724-256]
54. si:ch211-271g18.4 ENSDARG00000115564 197 1 - - - - - - 1.000 - - si:ch211-271g18.4 [Source:ZFIN;Acc:ZDB-GENE-110914-58]
55. SLC7A8 SLC7A8 25 1 - - - - - - 1.000 - -
56. FP102169.1 ENSDARG00000110967 1 1 - - - - - - 1.000 - - secreted frizzled-related protein 5-like [Source:NCBI gene;Acc:101884738]
57. CABZ01084564.1 ENSDARG00000045137 0 1 - - - - - - 1.000 - - histamine H3 receptor-like [Source:NCBI gene;Acc:100331077]
58. CABZ01054405.2 CABZ01054405.2 46 1 - - - - - - 1.000 - -
59. ubtd1b ENSDARG00000079623 26 1 - - - - - - 1.000 - - ubiquitin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050913-62]
60. tdrd5 ENSDARG00000071450 25 1 - - - - - - 1.000 - - tudor domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-050208-502]
61. dnah11 ENSDARG00000077384, ENSDARG00000094282 15 1 - - - - - 1.000 - - - dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
62. spef2 ENSDARG00000098330 59 1 - - - - - 1.000 - - - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
63. si:ch211-196g2.7 si:ch211-196g2.7 0 1 - - - - - - 1.000 - -
64. lrit1b ENSDARG00000099406 12 1 - - - - - - 1.000 - - leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b [Source:ZFIN;Acc:ZDB-GENE-060616-45]
65. mpg ENSDARG00000069729 43 1 - - - - - 1.000 - - - N-methylpurine DNA glycosylase [Source:ZFIN;Acc:ZDB-GENE-070410-121]
66. col7a1l ENSDARG00000069692 44 1 - - - - - 1.000 - - - collagen type VII alpha 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9861]
67. TTC29 ENSDARG00000058885, ENSDARG00000112776 1 1 - - - - - 1.000 - - - tetratricopeptide repeat domain 29 [Source:ZFIN;Acc:ZDB-GENE-100922-181]
68. crygs2 ENSDARG00000041171, ENSDARG00000111780 0 1 - - - - - 1.000 - - - crystallin, gamma S2 [Source:ZFIN;Acc:ZDB-GENE-050126-3]
69. chmp6b ENSDARG00000102024 37 1 - - - - - - 1.000 - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
70. mb21d1 ENSDARG00000021572 12 1 - - - - - - 1.000 - - Mab-21 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-23]
71. rab14l ENSDARG00000035188 18 1 - - - - - 1.000 - - - RAB14, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-040426-1207]
72. pnpla4 ENSDARG00000069834, ENSDARG00000110613 15 1 - - - - - - 1.000 - - patatin-like phospholipase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070410-74]
73. c1ql3a ENSDARG00000010350 179 1 - - - - - 1.000 - - - complement component 1, q subcomponent-like 3a [Source:ZFIN;Acc:ZDB-GENE-080417-1]
74. rilpl1 0 1 - - - - - 1.000 - - - Rab interacting lysosomal protein-like 1
75. nedd9 ENSDARG00000089878, ENSDARG00000116312 41 1 - - - - - 1.000 - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
76. LRTM1 ENSDARG00000098742 21 1 - - - - - - 1.000 - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
77. ZDHHC1 ENSDARG00000077546 14 1 - - - - - - 1.000 - - zinc finger, DHHC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-130925-1]
78. irf10 ENSDARG00000027658 7 1 - - - - - - 1.000 - - interferon regulatory factor 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2084]
79. med8 ENSDARG00000114425 7 1 - - - - - - 1.000 - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
80. ehf ENSDARG00000052115, ENSDARG00000112589 24 1 - - - - - 1.000 - - - ets homologous factor [Source:ZFIN;Acc:ZDB-GENE-060312-7]
81. si:ch211-194e1.8 si:ch211-194e1.8 14 1 - - - - - - 1.000 - -
82. ccdc127a 39 1 - - - - - 1.000 - - - coiled-coil domain containing 127a, transcript variant X2
83. crfb16 ENSDARG00000075181 40 1 - - - - - - 1.000 - - cytokine receptor family member B16 [Source:ZFIN;Acc:ZDB-GENE-071120-9]
84. itgb1b ENSDARG00000104484 51 1 - - - - - 1.000 - - - integrin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-030909-10]
85. si:dkey-188i13.8 ENSDARG00000092725 1 1 - - - - - 1.000 - - - si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
86. RDM1 RDM1 28 1 - - - - - - 1.000 - -
87. si:dkey-182i3.11 ENSDARG00000069270 3 1 - - - - - 1.000 - - - si:dkey-182i3.11 [Source:ZFIN;Acc:ZDB-GENE-121214-258]
88. CABZ01061549.1 CABZ01061549.1 17 1 - - - - - - 1.000 - -
89. agfg1a ENSDARG00000030020 6 1 - - - - - 1.000 - - - ArfGAP with FG repeats 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5808]
90. glipr1b ENSDARG00000030078 73 1 - - - - - - 1.000 - - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
91. CU633991.1 CU633991.1 16 1 - - - - - - 1.000 - -
92. OVOL1 75 1 - - - - - - 1.000 - - ovo-like zinc finger 1, transcript variant X1
93. pnp6 ENSDARG00000040942, ENSDARG00000114753 10 1 - - - - - - 1.000 - - purine nucleoside phosphorylase 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1800]
94. cttnbp2nl cttnbp2nl 166 1 - - - - - - 1.000 - -
95. si:dkeyp-118h3.1 si:dkeyp-118h3.1 0 1 - - - - - - 1.000 - -
96. kcnh1a ENSDARG00000024167 9 1 - - - - - - 1.000 - - potassium voltage-gated channel, subfamily H (eag-related), member 1a [Source:ZFIN;Acc:ZDB-GENE-061226-1]
97. tnnc1a ENSDARG00000011400 165 1 - - - - - 1.000 - - - troponin C type 1a (slow) [Source:ZFIN;Acc:ZDB-GENE-030523-1]
98. mcm3l ENSDARG00000037532, ENSDARG00000110461 7 1 - - - - - 1.000 - - - MCM3 minichromosome maintenance deficient 3 (S. cerevisiae), like [Source:ZFIN;Acc:ZDB-GENE-040121-2]
99. si:dkey-114e9.1 si:dkey-114e9.1 233 1 - - - - - - 1.000 - -
100. FP236631.1 FP236631.1 3 1 - - - - - - - 1.000 -

There are 922 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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