Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for syne1a

Gene Name Gene ID Reads Annotation
syne1a ENSDARG00000009499, ENSDARG00000116204 601 spectrin repeat containing, nuclear envelope 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4172]










Genes with expression patterns similar to syne1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. syne1a ENSDARG00000009499, ENSDARG00000116204 601 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 spectrin repeat containing, nuclear envelope 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4172]
2. cacna1sa ENSDARG00000029457 883 2.249 - 0.792 - - - 0.727 0.730 - - calcium channel, voltage-dependent, L type, alpha 1S subunit, a [Source:ZFIN;Acc:ZDB-GENE-090514-1]
3. akt2 ENSDARG00000011219 647 1.784 - 0.882 - - - - - 0.902 - v-akt murine thymoma viral oncogene homolog 2 [Source:ZFIN;Acc:ZDB-GENE-031007-5]
4. zgc:162948 ENSDARG00000053695 301 1.704 - 0.834 - - - - - 0.870 - zgc:162948 [Source:ZFIN;Acc:ZDB-GENE-070424-46]
5. BX511021.1 ENSDARG00000073936 647 1.687 - - - - - - 0.811 0.876 - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
6. usp4 ENSDARG00000014770 1684 1.675 - - - - - - 0.770 0.905 - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
7. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 1.664 - - - - - - 0.791 0.873 - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
8. xrcc6bp1 662 1.648 - 0.805 - - - - - 0.843 - XRCC6 binding protein 1
9. slc44a5b ENSDARG00000057419 534 1.644 - - - - - 0.772 - 0.872 - solute carrier family 44, member 5b [Source:ZFIN;Acc:ZDB-GENE-081105-4]
10. rps6kal ENSDARG00000037574, ENSDARG00000115099 294 1.628 - - - - - 0.825 0.803 - - ribosomal protein S6 kinase a, like [Source:ZFIN;Acc:ZDB-GENE-030131-9616]
11. pik3c3 ENSDARG00000054829 559 1.624 - - - - - - 0.757 0.867 - phosphatidylinositol 3-kinase, catalytic subunit type 3 [Source:ZFIN;Acc:ZDB-GENE-050410-13]
12. manea ENSDARG00000001898 450 1.61 0.859 0.751 - - - - - - - mannosidase, endo-alpha [Source:ZFIN;Acc:ZDB-GENE-040912-87]
13. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 1.595 - - - - - - 0.746 0.849 - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
14. pigt ENSDARG00000075842 210 1.578 - 0.829 - - - - 0.749 - - phosphatidylinositol glycan anchor biosynthesis, class T [Source:ZFIN;Acc:ZDB-GENE-090313-46]
15. clstn2 ENSDARG00000060637 548 1.566 - 0.852 - - - - 0.714 - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
16. smtnl1 ENSDARG00000041257 7410 1.564 - - - - - - 0.806 0.758 - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
17. GIGYF1_1 GIGYF1_1 1865 1.563 - 0.724 - - - 0.839 - - -
18. nploc4 ENSDARG00000100487 1262 1.558 - 0.746 - - - - 0.812 - - NPL4 homolog, ubiquitin recognition factor [Source:ZFIN;Acc:ZDB-GENE-030131-5658]
19. ubtf ENSDARG00000035066 4070 1.547 - - - - - 0.775 - 0.772 - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
20. ercc4 ENSDARG00000014161 2167 1.547 - 0.793 - - - - - 0.754 - excision repair cross-complementation group 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5533]
21. ATP5J 343 1.53 - - - - - - 0.747 0.783 - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
22. CU571169.1 ENSDARG00000100253 575 1.53 - - - - - - 0.736 0.794 -
23. dnajc18 ENSDARG00000056005 8084 1.529 - - - - - - 0.727 0.802 - DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
24. sms ENSDARG00000008155 1192 1.529 - - - - - 0.804 0.725 - - spermine synthase [Source:ZFIN;Acc:ZDB-GENE-040625-150]
25. CABZ01080590.2 CABZ01080590.2 2038 1.528 - - - - - - 0.817 0.711 -
26. capn3b ENSDARG00000043035, ENSDARG00000113539 229 1.517 - 0.810 - - - - 0.707 - - calpain 3b [Source:ZFIN;Acc:ZDB-GENE-041001-149]
27. gli2a ENSDARG00000025641 2154 1.516 - - - - - 0.765 - 0.751 - GLI family zinc finger 2a [Source:ZFIN;Acc:ZDB-GENE-990706-8]
28. enah ENSDARG00000032049 1526 1.508 - - - - - - 0.783 0.725 - enabled homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010323-11]
29. dyrk2 ENSDARG00000094646 2163 1.491 - - - - - - 0.763 0.728 - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
30. ddb1 ENSDARG00000074431 1054 1.481 - - - - - 0.725 - 0.756 - damage-specific DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1272]
31. fibina ENSDARG00000039949 533 1.48 - - - - - - 0.742 0.738 - fin bud initiation factor a [Source:ZFIN;Acc:ZDB-GENE-111031-2]
32. AL954697.2 AL954697.2 1809 1.474 - 0.764 - - - 0.710 - - -
33. ubr7 ENSDARG00000005536 1108 1.47 - - - - - 0.743 - 0.727 - ubiquitin protein ligase E3 component n-recognin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-1535]
34. heatr3 ENSDARG00000036076 944 0.946 - - - - - - - 0.946 - HEAT repeat containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1876]
35. ZNF70_11 ZNF70_11 1246 0.938 - - - - - - - 0.938 -
36. adora1 adora1 149 0.935 - - - - - - - 0.935 -
37. phf6 ENSDARG00000004046, ENSDARG00000115639 925 0.932 - - - - - - - 0.932 - PHD finger protein 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5278]
38. FAAH ENSDARG00000077764 292 0.93 - 0.930 - - - - - - - fatty acid amide hydrolase [Source:ZFIN;Acc:ZDB-GENE-070619-3]
39. thoc6 ENSDARG00000037966, ENSDARG00000110342, ENSDARG00000116948 554 0.924 - 0.924 - - - - - - - THO complex 6 [Source:ZFIN;Acc:ZDB-GENE-041010-198]
40. timm10 ENSDARG00000069116 4459 0.923 - - - - - - - 0.923 - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
41. ALPK1 195 0.917 - - - - - - - 0.917 - alpha-kinase 1
42. tiprl ENSDARG00000032353 1045 0.915 - - - - - - - 0.915 - TIP41, TOR signaling pathway regulator-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1611]
43. OXR1 OXR1 378 0.911 - 0.911 - - - - - - -
44. si:dkey-14k9.3 ENSDARG00000045595 256 0.91 - - - - - - - 0.910 - si:dkey-14k9.3 [Source:ZFIN;Acc:ZDB-GENE-030131-2893]
45. SHANK1 ENSDARG00000060539 102 0.908 - - - - - - - 0.908 - SH3 and multiple ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130530-691]
46. CEP85 ENSDARG00000060215 537 0.907 - 0.907 - - - - - - - centrosomal protein 85 [Source:ZFIN;Acc:ZDB-GENE-030131-1998]
47. si:ch211-120j21.1 si:ch211-120j21.1 638 0.907 - - - - - - 0.907 - -
48. dclk1a ENSDARG00000018856 177 0.906 - - - - - - - 0.906 - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
49. nrxn2b ENSDARG00000063150 343 0.905 - - - - - - - 0.905 - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
50. aatkb ENSDARG00000104442 392 0.903 - - - - - - - 0.903 - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
51. arrdc1b ENSDARG00000079839 236 0.903 - 0.903 - - - - - - - arrestin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080515-2]
52. gtdc2 gtdc2 523 0.902 - - - - - - - 0.902 -
53. setx ENSDARG00000022996 385 0.902 - - - - - - - 0.902 - senataxin [Source:ZFIN;Acc:ZDB-GENE-070402-1]
54. TTF1_4 TTF1_4 504 0.902 - - - - - - - 0.902 -
55. CABZ01080599.2 CABZ01080599.2 192 0.9 - - - - - - - 0.900 -
56. si:dkey-17e6.2 si:dkey-17e6.2 72 0.9 - - - - - - - 0.900 -
57. fam69b ENSDARG00000117093 244 0.9 - 0.900 - - - - - - - family with sequence similarity 69, member B [Source:ZFIN;Acc:ZDB-GENE-080721-1]
58. ANGPT4 ENSDARG00000076787 140 0.9 - - - - - - - 0.900 - angiopoietin 4 [Source:ZFIN;Acc:ZDB-GENE-110104-1]
59. si:dkey-253d23.2 ENSDARG00000071589 143 0.899 - - - - - - - 0.899 - si:dkey-253d23.2 [Source:ZFIN;Acc:ZDB-GENE-050208-410]
60. BX005410.2 BX005410.2 44 0.898 - - - - - - - 0.898 -
61. si:dkey-157e10.7 si:dkey-157e10.7 105 0.898 - - - - - - - 0.898 -
62. POLQ ENSDARG00000044622, ENSDARG00000110374 94 0.898 - - - - - - - 0.898 - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
63. fzd2 ENSDARG00000054438 585 0.898 - 0.898 - - - - - - - frizzled class receptor 2 [Source:ZFIN;Acc:ZDB-GENE-990415-224]
64. ak4 ENSDARG00000006546 1528 0.898 - - - - - - - 0.898 - adenylate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2505]
65. si:dkey-114c15.7 237 0.897 - - - - - - - 0.897 - si:dkey-114c15.7
66. mea1 ENSDARG00000039820 589 0.897 - - - - - - - 0.897 - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
67. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 0.896 - - - - - - - 0.896 - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
68. CR381544.1 ENSDARG00000088187 821 0.896 - - - - - - - 0.896 -
69. RBM26 ENSDARG00000104130 1012 0.896 - - - - - - - 0.896 - RNA binding motif protein 26 [Source:ZFIN;Acc:ZDB-GENE-050706-50]
70. TFPT ENSDARG00000089572, ENSDARG00000111694 112 0.896 - - - - - - - 0.896 - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
71. ankdd1b ENSDARG00000025866 51 0.896 - - - - - - - 0.896 - ankyrin repeat and death domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060526-136]
72. NHSL2 ENSDARG00000089066 374 0.895 - - - - - - - 0.895 - NHS-like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-951]
73. pdxka ENSDARG00000088959 217 0.895 - - - - - - - 0.895 - pyridoxal (pyridoxine, vitamin B6) kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8376]
74. IKZF4 ENSDARG00000037068 36 0.895 - - - - - - - 0.895 - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
75. setd1a ENSDARG00000060030 874 0.895 - - - - - - - 0.895 - SET domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-080521-4]
76. MAP7 MAP7 98 0.895 - - - - - - - 0.895 -
77. reep1 ENSDARG00000014854 915 0.895 - - - - - - - 0.895 - receptor accessory protein 1 [Source:ZFIN;Acc:ZDB-GENE-110411-267]
78. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 0.894 - - - - - - - 0.894 - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
79. pde6b ENSDARG00000011671 44 0.894 - - - - - - - 0.894 - phosphodiesterase 6B, cGMP-specific, rod, beta [Source:ZFIN;Acc:ZDB-GENE-090421-2]
80. gna13b ENSDARG00000037924 1963 0.894 - - - - - - - 0.894 - guanine nucleotide binding protein (G protein), alpha 13b [Source:ZFIN;Acc:ZDB-GENE-030131-8277]
81. orc6 ENSDARG00000075682 1382 0.894 - - - - - - - 0.894 - origin recognition complex, subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2976]
82. adcyap1a ENSDARG00000004015 67 0.894 - - - - - - - 0.894 - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
83. si:dkey-100h21.2 si:dkey-100h21.2 30 0.894 - - - - - - - 0.894 -
84. pus7 ENSDARG00000031774 195 0.894 - - - - - - - 0.894 - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
85. p2rx3b ENSDARG00000029718 105 0.894 - - - - - - - 0.894 - purinergic receptor P2X, ligand-gated ion channel, 3b [Source:ZFIN;Acc:ZDB-GENE-030319-3]
86. mir130b 180 0.894 - - - - - - - 0.894 - microRNA 130b
87. si:ch73-167f18.3 si:ch73-167f18.3 78 0.894 - - - - - - - 0.894 -
88. jam3a ENSDARG00000114589 630 0.894 - - - - - - - 0.894 - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
89. VDAC3 ENSDARG00000003695 34 0.893 - - - - - - - 0.893 - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
90. ical1 ENSDARG00000057688 357 0.893 0.893 - - - - - - - - islet cell autoantigen 1-like [Source:ZFIN;Acc:ZDB-GENE-030910-4]
91. ly75 ENSDARG00000053113 196 0.893 - - - - - - - 0.893 - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
92. hn1a hn1a 115 0.893 - - - - - - - 0.893 -
93. GDPD4_1 GDPD4_1 190 0.892 - - - - - - - 0.892 -
94. b3galtla b3galtla 111 0.892 - - - - - - - 0.892 -
95. bola1 ENSDARG00000039915 658 0.892 - - - - - - - 0.892 - bolA family member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-76]
96. spef2 ENSDARG00000098330 59 0.892 - - - - - - - 0.892 - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
97. vcam1 vcam1 243 0.891 - - - - - - - 0.891 -
98. hoxa4a 37 0.891 - - - - - - - 0.891 - homeobox A4a, transcript variant X4
99. fam172a ENSDARG00000052697 422 0.891 - - - - - - - 0.891 - family with sequence similarity 172, member A [Source:ZFIN;Acc:ZDB-GENE-040426-1396]
100. rpgra ENSDARG00000056617 77 0.891 - - - - - - - 0.891 - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]

There are 1361 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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