Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for syncrip

Gene Name Gene ID Reads Annotation
syncrip ENSDARG00000040184 24690 synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]










Genes with expression patterns similar to syncrip

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. syncrip ENSDARG00000040184 24690 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
2. selt2 12741 2.814 - 0.973 - - - 0.850 0.991 - - selenoprotein T, 2
3. snrnp27 ENSDARG00000035625 9080 1.862 - 0.957 - - - - - - 0.905 small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
4. psmc6 ENSDARG00000037038, ENSDARG00000111223, ENSDARG00000114650 25449 1.849 - - - - - 0.859 0.990 - - proteasome 26S subunit, ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-304]
5. trappc1 ENSDARG00000039005 6990 1.798 - 0.949 - - - 0.849 - - - trafficking protein particle complex 1 [Source:ZFIN;Acc:ZDB-GENE-040718-242]
6. cirbp cirbp 88363 1.772 - - - - - - 0.962 - 0.810
7. dlst ENSDARG00000014230, ENSDARG00000113407 6282 1.769 - 0.931 - - - 0.838 - - - dihydrolipoamide S-succinyltransferase [Source:ZFIN;Acc:ZDB-GENE-030326-1]
8. ndufa9 ndufa9 8846 1.768 - 0.968 - - - 0.800 - - -
9. kpnb1 ENSDARG00000104889 9282 1.759 - - - - 0.767 - 0.992 - - karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
10. sdprb sdprb 13647 1.748 - - - 0.763 - - 0.985 - -
11. glulb ENSDARG00000100003, ENSDARG00000113742 19292 1.746 - - - - - - 0.996 - 0.750 glutamate-ammonia ligase (glutamine synthase) b [Source:ZFIN;Acc:ZDB-GENE-030131-8417]
12. nap1l4a ENSDARG00000070560, ENSDARG00000113907 4244 1.743 - - - - - 0.849 - - 0.894 nucleosome assembly protein 1-like 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9099]
13. KDM6B KDM6B 10265 1.741 - 0.974 - - - 0.767 - - -
14. blcap ENSDARG00000052073 8646 1.727 0.870 - 0.857 - - - - - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
15. calm2a ENSDARG00000031427, ENSDARG00000111871 43643 1.695 - 0.942 0.753 - - - - - - calmodulin 2a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030804-3]
16. mphosph8 ENSDARG00000005576, ENSDARG00000114033 5350 1.693 0.834 - - - - 0.859 - - - M-phase phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-050309-191]
17. pnrc2 ENSDARG00000053291, ENSDARG00000112537 50848 1.691 - - 0.780 - - - - - 0.911 proline-rich nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5475]
18. rps13 ENSDARG00000036298, ENSDARG00000112818 58520 1.69 - - - - 0.731 - 0.959 - - ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
19. h2afvb ENSDARG00000116491 35692 1.662 - - 0.774 - - - 0.888 - - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
20. psma6b ENSDARG00000013966 4410 1.629 - - 0.724 - - - - - 0.905 proteasome subunit alpha 6b [Source:ZFIN;Acc:ZDB-GENE-040718-329]
21. ankrd13c ENSDARG00000103831 3593 1.618 0.899 - - - 0.719 - - - - ankyrin repeat domain 13C [Source:ZFIN;Acc:ZDB-GENE-030131-3892]
22. efemp2a ENSDARG00000094324 39261 1.609 - - - - - 0.872 - - 0.737 EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
23. hnrnpm ENSDARG00000061735 19428 1.609 - - 0.773 - - 0.836 - - - heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
24. fbp1b ENSDARG00000020364, ENSDARG00000111266 10050 1.601 - - - 0.718 - - - - 0.883 fructose-1,6-bisphosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-021206-11]
25. ube2e1 ENSDARG00000116649 10656 1.591 - - - - 0.795 - - 0.796 - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
26. tuba1b ENSDARG00000045367 8485 1.586 - - - - - 0.863 - 0.723 - tubulin, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030822-1]
27. atp1b3a ENSDARG00000015790 12310 1.584 0.709 - - - - - - - 0.875 ATPase Na+/K+ transporting subunit beta 3a [Source:ZFIN;Acc:ZDB-GENE-990415-167]
28. tmed10 ENSDARG00000041391, ENSDARG00000110672 23599 1.562 0.707 - - - - 0.855 - - - transmembrane p24 trafficking protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-4915]
29. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 1.559 - - 0.723 - - - - 0.836 - regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
30. seta ENSDARG00000031495 39977 1.551 - - 0.744 - - - 0.807 - - SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
31. kctd5 kctd5 13455 1.545 - - 0.701 - 0.844 - - - -
32. yy1a ENSDARG00000042796 4982 1.544 - - - 0.798 0.746 - - - - YY1 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-1117]
33. gnb4b ENSDARG00000115383 7457 1.542 - - 0.719 - 0.823 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
34. kpnb3 ENSDARG00000040245 7967 1.541 - - 0.778 - - - - 0.763 - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
35. plxnb1b ENSDARG00000017211 4676 1.536 - - - 0.792 0.744 - - - - plexin b1b [Source:ZFIN;Acc:ZDB-GENE-090812-4]
36. tubb4b ENSDARG00000002344 30333 1.529 - - - 0.809 - 0.720 - - - tubulin, beta 4B class IVb [Source:ZFIN;Acc:ZDB-GENE-030131-8625]
37. col4a6 ENSDARG00000052061 8636 1.528 0.817 - - - - 0.711 - - - collagen, type IV, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-101001-2]
38. CORO1C CORO1C 5554 1.52 - - - 0.780 0.740 - - - -
39. gli2b ENSDARG00000020884 1468 1.517 - - - 0.777 0.740 - - - - GLI family zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-050523-1]
40. rps20 ENSDARG00000036044 121457 1.504 0.772 - - - - - 0.732 - - ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
41. stip1 ENSDARG00000004906 7742 1.501 - - 0.727 0.774 - - - - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
42. smarca5 ENSDARG00000052348 15433 1.499 - - - - 0.705 - - 0.794 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
43. rpa1 ENSDARG00000003938 4403 1.499 - 0.784 - - 0.715 - - - - replication protein A1 [Source:ZFIN;Acc:ZDB-GENE-030912-3]
44. btg2 ENSDARG00000020298 6616 1.491 - - 0.751 - 0.740 - - - - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
45. srsf6b ENSDARG00000016783 9926 1.489 - - 0.770 - - - - 0.719 - serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
46. ppiab ENSDARG00000103994 47491 1.485 - - - - 0.765 0.720 - - - peptidylprolyl isomerase Ab (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-7459]
47. zbtb33 ENSDARG00000071467, ENSDARG00000112085 1425 1.478 - - 0.735 - 0.743 - - - - zinc finger and BTB domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-070412-3]
48. rad23b ENSDARG00000021550 2575 1.469 - - 0.736 - 0.733 - - - - RAD23 homolog B, nucleotide excision repair protein [Source:ZFIN;Acc:ZDB-GENE-040426-1487]
49. sepw2a 8597 1.455 - - 0.721 - - - - 0.734 - selenoprotein W, 2a
50. klf11a ENSDARG00000030844 3972 0.995 - - - - - - 0.995 - - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
51. mybpc3 ENSDARG00000011615 7271 0.993 - - - - - - 0.993 - - myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
52. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 0.992 - - - - - - 0.992 - - serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
53. CR548630.1 CR548630.1 3301 0.991 - - - - - - 0.991 - -
54. psmb1 ENSDARG00000009640 8628 0.991 - - - - - - 0.991 - - proteasome subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040618-2]
55. SEMA5B SEMA5B 1316 0.991 - - - - - - 0.991 - -
56. SGPP1 ENSDARG00000060534 1802 0.991 - - - - - - 0.991 - - sphingosine-1-phosphate phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-090319-2]
57. rhoad rhoad 8007 0.991 - - - - - - 0.991 - -
58. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 0.991 - - - - - - 0.991 - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
59. prmt5 ENSDARG00000079605, ENSDARG00000116785 4676 0.991 - - - - - - 0.991 - - protein arginine methyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-030616-585]
60. foxp1a ENSDARG00000004843 3961 0.991 - - - - - - 0.991 - - forkhead box P1a [Source:ZFIN;Acc:ZDB-GENE-060929-624]
61. si:dkeyp-13a3.7 si:dkeyp-13a3.7 3422 0.991 - - - - - - 0.991 - -
62. vbp1 ENSDARG00000030241 10619 0.991 - - - - - - 0.991 - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
63. snx9b ENSDARG00000069302, ENSDARG00000116107 5673 0.991 - - - - - - 0.991 - - sorting nexin 9b [Source:ZFIN;Acc:ZDB-GENE-031118-50]
64. sfrp5 ENSDARG00000039041 1777 0.991 - - - - - - 0.991 - - secreted frizzled-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-011108-2]
65. aaas ENSDARG00000102274 1192 0.991 - - - - - - 0.991 - - achalasia, adrenocortical insufficiency, alacrimia [Source:ZFIN;Acc:ZDB-GENE-030912-4]
66. map7d3 ENSDARG00000060771 1739 0.991 - - - - - - 0.991 - - MAP7 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-121129-3]
67. apg3l apg3l 5153 0.991 - - - - - - 0.991 - -
68. fam133b ENSDARG00000013863 5070 0.991 - - - - - - 0.991 - - family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
69. clasp2 ENSDARG00000020345 3382 0.991 - - - - - - 0.991 - - cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
70. gpbp1l1 ENSDARG00000075569, ENSDARG00000112704 3478 0.991 - - - - - - 0.991 - - GC-rich promoter binding protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-031118-220]
71. grpel2 ENSDARG00000069421 5673 0.99 - - - - - 0.990 - - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
72. si:ch211-71n6.4 ENSDARG00000102234 2499 0.99 - - - - - - 0.990 - - si:ch211-71n6.4 [Source:ZFIN;Acc:ZDB-GENE-091204-213]
73. smyd2b ENSDARG00000005629 8181 0.99 - - - - - - 0.990 - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
74. CAPN2 CAPN2 1497 0.99 - - - - - - 0.990 - -
75. hspe1 ENSDARG00000056167 21636 0.989 - - - - - - 0.989 - - heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2]
76. rpl4 ENSDARG00000041182 18655 0.987 - - - - - - 0.987 - - ribosomal protein L4 [Source:ZFIN;Acc:ZDB-GENE-030131-9034]
77. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 0.982 - - - - - - 0.982 - - parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
78. clta ENSDARG00000045618, ENSDARG00000115484 11767 0.982 - 0.982 - - - - - - - clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
79. azin1b ENSDARG00000035869, ENSDARG00000115647 9761 0.98 - - - - - 0.980 - - - antizyme inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-030121-1]
80. tnni1al 8272 0.979 - - - - - - 0.979 - - troponin I, skeletal, slow like, transcript variant X1
81. eif1axb ENSDARG00000057912, ENSDARG00000111310 26395 0.978 - 0.978 - - - - - - - eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
82. f11r f11r 16668 0.972 - - - - - - 0.972 - -
83. tegt ENSDARG00000077934 27182 0.971 - - - - - - 0.971 - - testis enhanced gene transcript (BAX inhibitor 1) [Source:ZFIN;Acc:ZDB-GENE-030826-10]
84. txnrd1 11401 0.97 - 0.970 - - - - - - - thioredoxin reductase 1
85. rtn2a ENSDARG00000016088 12184 0.97 - 0.970 - - - - - - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
86. rpl39 ENSDARG00000036316, ENSDARG00000117167 80631 0.97 - - - - - - 0.970 - - ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
87. ebna1bp2 ENSDARG00000054980 4621 0.964 - 0.964 - - - - - - - EBNA1 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6989]
88. atp2a1l ENSDARG00000035458 6222 0.962 - - - - - - 0.962 - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, like [Source:ZFIN;Acc:ZDB-GENE-041229-2]
89. pcdh1gc5 ENSDARG00000104826 10052 0.962 - - - - - - - - 0.962 protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
90. srsf2a ENSDARG00000057484 25721 0.962 - 0.962 - - - - - - - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
91. hoxb8a ENSDARG00000056027 6340 0.961 - 0.961 - - - - - - - homeobox B8a [Source:ZFIN;Acc:ZDB-GENE-990415-108]
92. lzts2a ENSDARG00000074597, ENSDARG00000113794 7477 0.96 - 0.960 - - - - - - - leucine zipper, putative tumor suppressor 2a [Source:ZFIN;Acc:ZDB-GENE-090313-276]
93. jph2 ENSDARG00000028625 6706 0.959 - 0.959 - - - - - - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
94. dnajb12b ENSDARG00000087473 3811 0.958 - 0.958 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 12b [Source:ZFIN;Acc:ZDB-GENE-070410-128]
95. pdha1a ENSDARG00000012387, ENSDARG00000116841 8358 0.958 - - - - - 0.958 - - - pyruvate dehydrogenase E1 alpha 1 subunit a [Source:ZFIN;Acc:ZDB-GENE-040426-2719]
96. WDR83OS ENSDARG00000025554 7117 0.958 - 0.958 - - - - - - - WD repeat domain 83 opposite strand [Source:ZFIN;Acc:ZDB-GENE-040426-1674]
97. dad1 ENSDARG00000102105 14788 0.957 - - - - - 0.957 - - - defender against cell death 1 [Source:ZFIN;Acc:ZDB-GENE-060503-233]
98. ACVR1B ACVR1B 4824 0.956 - 0.956 - - - - - - -
99. anxa11b ENSDARG00000002632 5132 0.955 - 0.955 - - - - - - - annexin A11b [Source:ZFIN;Acc:ZDB-GENE-030707-5]
100. ezra ENSDARG00000020944 3105 0.954 - 0.954 - - - - - - - ezrin a [Source:ZFIN;Acc:ZDB-GENE-050522-18]

There are 704 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA