Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for syn2a

Gene Name Gene ID Reads Annotation
syn2a ENSDARG00000045945 434 synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]










Genes with expression patterns similar to syn2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. syn2a ENSDARG00000045945 434 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]
2. nxph1 ENSDARG00000033447 182 2.782 0.866 - - - - 0.974 0.942 - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
3. pcsk1nl ENSDARG00000076170 1232 2.777 0.882 - - - - 0.908 0.987 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
4. si:ch73-21g5.7 ENSDARG00000093156 9412 2.712 0.841 - - - - 0.933 0.938 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
5. BX957337.1 BX957337.1 1685 2.708 0.884 - - - - 0.894 0.930 - -
6. CLIP3 ENSDARG00000054456 734 2.708 0.841 - - - - 0.972 0.895 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
7. cnrip1a ENSDARG00000091683 1491 2.696 0.777 - - - - 0.987 0.932 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
8. VSTM2B VSTM2B 149 2.69 - 0.851 - - - 0.909 0.930 - -
9. st6gal1 ENSDARG00000044514 142 2.685 0.738 - - - - 0.992 0.955 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
10. dpysl4 ENSDARG00000103490 534 2.669 0.775 - - - - 0.948 0.946 - - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
11. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.661 0.770 - - - - 0.969 0.922 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
12. syt11a ENSDARG00000057913 1145 2.649 0.786 - - - - 0.915 0.948 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
13. kcnn1a ENSDARG00000091306 95 2.633 0.813 - - - - 0.926 0.894 - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a [Source:ZFIN;Acc:ZDB-GENE-070912-703]
14. mir10d-1 mir10d-1 860 2.603 0.830 - - - - 0.818 0.955 - -
15. SEMA7A ENSDARG00000078707 465 2.601 0.868 - - - - 0.766 0.967 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
16. upf3a ENSDARG00000069297, ENSDARG00000111067 196 2.595 0.721 - - - - 0.902 0.972 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
17. ksr2 ENSDARG00000094526 134 2.593 0.725 - - - - 0.991 0.877 - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
18. CU856359.2 CU856359.2 182 2.587 0.813 - - - - 0.933 0.841 - -
19. adarb1a ENSDARG00000041609 476 2.583 - 0.726 - - - 0.972 0.885 - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
20. scg2b ENSDARG00000038574 345 2.576 0.875 - - - - 0.888 0.813 - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
21. atcaya ENSDARG00000071678 344 2.573 0.772 - - - - 0.967 0.834 - - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
22. eno2 ENSDARG00000014287 2162 2.547 0.722 - - - - 0.896 0.929 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
23. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.545 0.748 - - - - 0.865 0.932 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
24. pcdh1gc5 ENSDARG00000104826 10052 2.539 0.754 - - - - 0.827 0.958 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
25. C7H4orf48 C7H4orf48 1455 2.531 0.736 - - - - 0.876 0.919 - -
26. nkx1.2lb ENSDARG00000099427 220 2.521 0.761 - - - - 0.878 0.882 - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
27. atp6ap1a ENSDARG00000041417 898 2.521 - - - - - 0.985 0.820 0.716 - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
28. si:dkey-169l5.3 si:dkey-169l5.3 239 2.52 0.821 - - - - - 0.920 0.779 -
29. sncgb ENSDARG00000109715 1014 2.506 0.741 - - - - 0.828 0.937 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
30. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 2.487 0.703 - - - - 0.911 0.873 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
31. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 2.481 0.803 - - - - 0.883 0.795 - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
32. ek1 ENSDARG00000020080 742 2.471 0.735 - - - - 0.950 0.786 - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
33. slc44a5b ENSDARG00000057419 534 2.471 - - - - - 0.874 0.783 0.814 - solute carrier family 44, member 5b [Source:ZFIN;Acc:ZDB-GENE-081105-4]
34. aatkb ENSDARG00000104442 392 2.46 - - - - - 0.781 0.894 0.785 - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
35. CABZ01051991.1 CABZ01051991.1 346 2.456 0.787 - - - - 0.768 0.901 - -
36. shisa7 shisa7 181 2.453 0.700 - - - - 0.890 0.863 - -
37. gabra5 ENSDARG00000070730 156 2.451 0.725 - - - - 0.780 0.946 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
38. TUBB8P7_1 TUBB8P7_1 2722 2.441 0.712 - - - - 0.734 0.995 - -
39. atp1b4 ENSDARG00000053262 1337 2.427 0.724 - - - - 0.898 0.805 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
40. rtn1b ENSDARG00000021143 1682 2.411 0.780 - - - - 0.822 0.809 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
41. prune2 ENSDARG00000059423, ENSDARG00000116519 646 2.409 - - - - - 0.943 0.713 0.753 - prune homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050309-222]
42. myt1b ENSDARG00000102879 5411 2.408 0.808 - - - - 0.741 0.859 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
43. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 2.402 0.733 - - - - 0.799 0.870 - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
44. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.398 0.742 - - - - 0.767 0.889 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
45. lrp11 ENSDARG00000034076 313 2.391 - 0.736 - - - 0.806 0.849 - - low density lipoprotein receptor-related protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-7847]
46. TUBA1A ENSDARG00000001889 25294 2.374 0.713 - - - - 0.716 0.945 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
47. mllt11 ENSDARG00000071026 2518 2.373 0.701 - - - - 0.771 0.901 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
48. hoxc4a ENSDARG00000070338 1382 2.368 - 0.770 - - - 0.798 0.800 - - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
49. tmie ENSDARG00000069423 305 2.368 0.735 - - - - - 0.887 0.746 - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
50. AUTS2 AUTS2 504 2.328 0.715 - - - - 0.823 0.790 - -
51. SALL2 ENSDARG00000075116 527 2.297 0.712 - - - - 0.839 0.746 - - spalt-like transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030829-32]
52. CAMSAP3 ENSDARG00000059475 263 2.286 0.710 0.733 - - - - 0.843 - - calmodulin regulated spectrin-associated protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-811]
53. fez1 ENSDARG00000023174 701 2.27 0.730 - - - - 0.803 0.737 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
54. nefmb ENSDARG00000043697 2052 2.259 0.718 - - - - - 0.832 0.709 - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
55. stmn2b ENSDARG00000070537 1586 2.186 0.710 - - - - 0.757 0.719 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
56. robo2 ENSDARG00000014891, ENSDARG00000078366 23 2.147 0.715 0.726 - - - - 0.706 - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
57. cacng8a ENSDARG00000020450 32 1.946 - - - - - 0.971 0.975 - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
58. st8sia5 ENSDARG00000036584 529 1.939 - - - - - 0.951 0.988 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
59. PPFIA3 ENSDARG00000077053 310 1.935 - - - - - 0.974 0.961 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
60. bsk146 ENSDARG00000099069 274 1.929 - - - - - 0.978 0.951 - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
61. cbln1 ENSDARG00000057296 165 1.925 - - - - - 0.978 0.947 - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
62. KCNIP4 ENSDARG00000088100 86 1.922 - - - - - 0.970 0.952 - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
63. lgi3 ENSDARG00000041358 46 1.909 - - - - - 0.955 0.954 - - leucine-rich repeat LGI family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060217-4]
64. nexmifb ENSDARG00000029296 416 1.905 - - - - - 0.948 0.957 - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
65. MAP6 MAP6 643 1.904 - - - - - 0.921 0.983 - -
66. dnajc6 ENSDARG00000079891 438 1.903 - - - - - 0.929 0.974 - - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
67. si:ch211-133l11.10 ENSDARG00000005626 381 1.902 - - - - - 0.954 0.948 - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
68. LINGO2 LINGO2 300 1.896 - - - - - 0.980 0.916 - -
69. sox2 ENSDARG00000070913 2763 1.894 - - - - - 0.979 0.915 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
70. C19H7orf41 C19H7orf41 2243 1.893 - - - - - 0.963 0.930 - -
71. glrbb ENSDARG00000052769, ENSDARG00000113828 467 1.891 0.920 - - - - - 0.971 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
72. stmn1b ENSDARG00000033655 9491 1.887 - - - - - 0.951 0.936 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
73. trim2b ENSDARG00000076174 250 1.881 - - - - - 0.955 0.926 - - tripartite motif containing 2b [Source:ZFIN;Acc:ZDB-GENE-090312-70]
74. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 1.874 - - - - - 0.973 0.901 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
75. rdh12 ENSDARG00000018069 396 1.874 - - - - - 0.907 0.967 - - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
76. atpv0e2 ENSDARG00000059057 585 1.873 - - - - - 0.991 0.882 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
77. ADAM22 ENSDARG00000060532 2259 1.869 - - - - - 0.947 0.922 - - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
78. notch1b ENSDARG00000052094 7874 1.868 - - - - - 0.942 0.926 - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
79. her15.2 her15.2 1701 1.867 - - - - - 0.962 0.905 - -
80. lhx5 ENSDARG00000057936 785 1.866 - - - - - 0.886 0.980 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
81. zic3 ENSDARG00000071497 1448 1.863 - - - - - 0.988 0.875 - - zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030708-2]
82. BX470131.1 BX470131.1 86 1.862 - - - - - 0.940 0.922 - -
83. mapk12b ENSDARG00000006409 2246 1.862 - - - - - 0.928 0.934 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
84. sez6l2 ENSDARG00000076052 360 1.856 - - - - - 0.898 0.958 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
85. hpca ENSDARG00000018397, ENSDARG00000110115 3866 1.851 - - - - - 0.958 0.893 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
86. scn1lab ENSDARG00000062744 155 1.849 - - - - - 0.884 0.965 - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
87. CABZ01065506.1 CABZ01065506.1 204 1.846 - - - - - 0.931 0.915 - -
88. atp2b3b ENSDARG00000023445 1424 1.844 - - - - - 0.913 0.931 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
89. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 1.84 - - - - - 0.964 0.876 - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
90. st18 663 1.839 - - - - - 0.907 0.932 - - suppression of tumorigenicity 18, zinc finger
91. pkib ENSDARG00000053110 527 1.837 - - - - - 0.974 0.863 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
92. AL929252.1 AL929252.1 81 1.835 - - - - - 0.878 0.957 - -
93. tnika ENSDARG00000056218 728 1.835 - - - - - 0.960 0.875 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
94. plcxd3 ENSDARG00000054794 112 1.829 0.872 - - - - - 0.957 - - phosphatidylinositol-specific phospholipase C, X domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-10]
95. DTX4 ENSDARG00000076302 2642 1.828 - - - - - 0.920 0.908 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
96. stmn2a ENSDARG00000033234 2272 1.828 - - - - - 0.912 0.916 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
97. hmp19 2554 1.828 - - - - - 0.876 0.952 - - HMP19 protein
98. TMEM57 TMEM57 260 1.826 - - - - - 0.929 0.897 - -
99. nptx1l ENSDARG00000074671 569 1.825 - - - - - 0.923 0.902 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
100. slc6a1b ENSDARG00000039647 1301 1.823 - - - - - 0.975 0.848 - - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]

There are 2623 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA