Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for syn1

Gene Name Gene ID Reads Annotation
syn1 ENSDARG00000060368, ENSDARG00000111164 397 synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]










Genes with expression patterns similar to syn1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. syn1 ENSDARG00000060368, ENSDARG00000111164 397 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
2. nexmifb ENSDARG00000029296 416 3.49 0.743 - - 0.954 - 0.843 0.950 - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
3. mapk12b ENSDARG00000006409 2246 3.482 0.781 - 0.916 - - 0.850 0.935 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
4. syt11a ENSDARG00000057913 1145 3.452 0.703 - 0.997 - - 0.851 0.901 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
5. gfap ENSDARG00000025301 5584 3.429 0.728 - 0.979 - - 0.755 0.967 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
6. cldn5a ENSDARG00000043716 3865 3.256 0.832 - 0.845 - - 0.733 0.846 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
7. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 3.189 0.774 - - - - 0.756 0.959 0.700 - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
8. EML6 250 3.119 0.715 0.748 - - - 0.795 0.861 - - echinoderm microtubule associated protein like 6
9. ELOVL4 ELOVL4 3026 2.745 0.878 - 0.995 - - - 0.872 - -
10. cplx2l ENSDARG00000018997 3975 2.695 0.741 - 0.994 - - - 0.960 - - complexin 2, like [Source:ZFIN;Acc:ZDB-GENE-040718-160]
11. cers6 ENSDARG00000053583 247 2.639 0.921 - - - - 0.768 0.950 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
12. SV2B SV2B 208 2.639 0.890 - - - - 0.764 0.985 - -
13. ppp3ca ENSDARG00000004988 615 2.632 0.885 - - - - 0.832 0.915 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
14. stmn2a ENSDARG00000033234 2272 2.629 0.856 - - - - 0.830 0.943 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
15. TUSC5 TUSC5 1436 2.627 0.898 - - - - 0.786 0.943 - -
16. SEMA7A ENSDARG00000078707 465 2.62 - - - 0.905 - 0.752 0.963 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
17. MAP6 MAP6 643 2.613 - - - - - 0.841 0.946 0.826 -
18. lhx5 ENSDARG00000057936 785 2.611 0.849 - - - - 0.781 0.981 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
19. tuba2 ENSDARG00000045014 1490 2.61 0.842 - - - - 0.873 0.895 - - tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
20. MAPK8IP1_1 MAPK8IP1_1 186 2.607 0.801 0.877 - - - - 0.929 - -
21. nxph1 ENSDARG00000033447 182 2.605 0.821 - - - - 0.836 0.948 - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
22. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.599 0.885 - - - - 0.834 0.880 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
23. LDLRAD4 LDLRAD4 1237 2.597 - 0.956 - - - 0.925 0.716 - -
24. scrt2 ENSDARG00000056175 4331 2.592 0.914 - - - - 0.754 0.924 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
25. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 2.592 0.805 - - - - 0.826 0.961 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
26. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.591 0.843 - - - - 0.803 0.945 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
27. pnoca ENSDARG00000025024 467 2.587 0.801 - - - - 0.840 0.946 - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
28. nin ENSDARG00000060298 1558 2.583 0.780 - 0.984 - - 0.819 - - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
29. CT030046.1 CT030046.1 190 2.581 - 0.937 - - - 0.811 0.833 - -
30. stmn1b ENSDARG00000033655 9491 2.577 0.813 - - - - 0.833 0.931 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
31. tnika ENSDARG00000056218 728 2.571 0.922 - - - - 0.843 0.806 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
32. gap43 ENSDARG00000099744 4114 2.568 0.843 - - - - 0.830 0.895 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
33. cuedc1a ENSDARG00000068716 232 2.565 0.707 0.940 - - - - 0.918 - - CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
34. dpysl4 ENSDARG00000103490 534 2.559 0.814 - - - - 0.780 0.965 - - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
35. scd ENSDARG00000033662 146 2.552 0.702 - 0.998 - - - 0.852 - - stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
36. ZFHX3 ENSDARG00000103057 7759 2.55 0.881 - - - - 0.776 0.893 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
37. pcdh1gc5 ENSDARG00000104826 10052 2.537 0.836 - - - - 0.780 0.921 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
38. mdkb ENSDARG00000020708 5393 2.525 0.813 - - - - 0.871 0.841 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
39. tuba1c ENSDARG00000055216 8384 2.52 0.798 - - - - 0.757 0.965 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
40. snap25a ENSDARG00000020609 4537 2.518 0.847 - - - - 0.709 0.962 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
41. plp1a ENSDARG00000103732 3544 2.516 0.779 - - - - 0.828 0.909 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
42. nlgn3b ENSDARG00000062376 171 2.513 0.749 - - - - - 0.958 0.806 - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
43. msi1 ENSDARG00000010710 2634 2.513 0.865 - - 0.723 - - 0.925 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
44. entpd3 ENSDARG00000035309 263 2.511 0.857 - - - - 0.802 0.852 - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
45. cadm3 ENSDARG00000057013 1545 2.509 0.776 - - - - 0.754 0.979 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
46. si:ch73-21g5.7 ENSDARG00000093156 9412 2.506 0.713 - - - - 0.864 0.929 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
47. C7H4orf48 C7H4orf48 1455 2.504 0.858 - - - - 0.804 0.842 - -
48. dpysl5a ENSDARG00000011141 1827 2.504 0.781 - - - - 0.764 0.959 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
49. lrrn3 lrrn3 137 2.503 0.789 - - - - 0.767 0.947 - -
50. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 2.499 0.907 - - - - 0.854 0.738 - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
51. atp6v0a2a ENSDARG00000035538 278 2.496 0.707 - - - - 0.831 0.958 - - ATPase H+ transporting V0 subunit a2a [Source:ZFIN;Acc:ZDB-GENE-091113-4]
52. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.494 0.786 - - - - 0.725 0.983 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
53. amph ENSDARG00000007663 599 2.494 0.837 - - - - 0.719 0.938 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
54. atcaya ENSDARG00000071678 344 2.489 0.739 - - - - 0.835 0.915 - - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
55. LINGO2 LINGO2 300 2.486 0.718 - - - - 0.836 0.932 - -
56. rab3ab ENSDARG00000043835 1267 2.485 0.779 - - - - 0.730 0.976 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
57. coe2 coe2 1633 2.485 - 0.799 0.971 - - 0.715 - - -
58. dpp6b ENSDARG00000024744 234 2.483 0.777 - - 0.890 - 0.816 - - - dipeptidyl-peptidase 6b [Source:ZFIN;Acc:ZDB-GENE-070705-88]
59. slc1a2b ENSDARG00000102453 3136 2.483 0.834 - - - - 0.716 0.933 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
60. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.482 0.787 - - - - 0.734 0.961 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
61. mir10d-1 mir10d-1 860 2.481 0.771 - - - - 0.779 0.931 - -
62. sox2 ENSDARG00000070913 2763 2.47 0.758 - - - - 0.845 0.867 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
63. nrn1a ENSDARG00000071860 1311 2.469 0.755 - - - - 0.839 0.875 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
64. adarb1a ENSDARG00000041609 476 2.455 0.703 - - - - 0.830 0.922 - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
65. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 2.451 0.732 0.880 - - - 0.839 - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
66. CLIP3 ENSDARG00000054456 734 2.448 0.741 - - - - 0.848 0.859 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
67. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.448 0.717 - - - - 0.792 0.939 - -
68. atp2b3b ENSDARG00000023445 1424 2.445 0.814 - - - - 0.788 0.843 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
69. prrt1 ENSDARG00000062208 368 2.439 0.805 - - - - 0.705 0.929 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
70. CU638738.1 CU638738.1 131 2.432 - 0.903 - - - 0.808 0.721 - -
71. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 2.431 0.786 - - - - 0.763 0.882 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
72. hoxc1a ENSDARG00000070337 1460 2.424 0.848 - - - - 0.811 0.765 - - homeobox C1a [Source:ZFIN;Acc:ZDB-GENE-000822-2]
73. upf3a ENSDARG00000069297, ENSDARG00000111067 196 2.423 0.770 - - - - 0.734 0.919 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
74. slc8a4a ENSDARG00000055154 90 2.418 0.762 - - - - 0.772 0.884 - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]
75. zic4 ENSDARG00000031307 1228 2.418 0.849 - - - - 0.787 0.782 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
76. sh3gl2 sh3gl2 1305 2.417 0.753 - - - - 0.715 0.949 - -
77. vsnl1a ENSDARG00000023228 1584 2.414 0.700 - - - - 0.806 0.908 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
78. pdzrn4 ENSDARG00000045687 362 2.407 - 0.818 - - - 0.708 0.881 - - PDZ domain containing ring finger 4 [Source:ZFIN;Acc:ZDB-GENE-041210-237]
79. ttll7 ENSDARG00000062973 519 2.406 0.784 - - - - 0.807 0.815 - - tubulin tyrosine ligase-like family, member 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2112]
80. slc1a3a ENSDARG00000104431 9888 2.405 0.848 - - - - 0.763 0.794 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
81. necap1 ENSDARG00000020798 612 2.403 0.760 - - - - 0.706 0.937 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
82. slc17a6b ENSDARG00000041150 823 2.403 - - - 0.746 - 0.770 0.887 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
83. CU570681.1 CU570681.1 512 2.402 - 0.726 - - - 0.877 0.799 - -
84. MAP1A MAP1A 847 2.4 0.700 - - - - 0.751 0.949 - -
85. atpv0e2 ENSDARG00000059057 585 2.396 0.793 - - - - 0.827 0.776 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
86. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.389 0.750 - - - - 0.719 0.920 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
87. sh3glb2b ENSDARG00000035470, ENSDARG00000109833 719 2.384 0.846 - - - - 0.727 0.811 - - SH3-domain GRB2-like endophilin B2b [Source:ZFIN;Acc:ZDB-GENE-040426-833]
88. LSM5 ENSDARG00000071573 371 2.379 - 0.849 - 0.813 - 0.717 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
89. appb ENSDARG00000055543, ENSDARG00000109552 4461 2.377 0.714 - - - - 0.882 0.781 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
90. mn1b ENSDARG00000079248 882 2.374 0.765 - - 0.825 - 0.784 - - - meningioma 1b [Source:ZFIN;Acc:ZDB-GENE-080917-23]
91. nptx1l ENSDARG00000074671 569 2.366 0.751 - - - - 0.768 0.847 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
92. zic3 ENSDARG00000071497 1448 2.366 0.776 - - - - 0.839 0.751 - - zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030708-2]
93. atl1 ENSDARG00000060481 251 2.366 0.703 - - - - 0.846 0.817 - - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
94. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 2.362 0.702 - - - - 0.748 0.912 - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
95. gpr144 gpr144 479 2.356 0.772 - - - - 0.800 0.784 - -
96. plk2b ENSDARG00000019130, ENSDARG00000111402 328 2.35 - 0.708 - 0.940 - 0.702 - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
97. mllt11 ENSDARG00000071026 2518 2.343 0.740 - - - - 0.733 0.870 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
98. fez1 ENSDARG00000023174 701 2.338 0.745 - - - - 0.752 0.841 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
99. kif1ab ENSDARG00000062024 794 2.337 0.710 - - - - 0.795 0.832 - - kinesin family member 1Ab [Source:ZFIN;Acc:ZDB-GENE-070912-480]
100. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.335 - - 0.850 - - 0.742 0.743 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]

There are 3157 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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