Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sycp3

Gene Name Gene ID Reads Annotation
sycp3 ENSDARG00000013438 25 synaptonemal complex protein 3 [Source:ZFIN;Acc:ZDB-GENE-040910-2]










Genes with expression patterns similar to sycp3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sycp3 ENSDARG00000013438 25 6 1.000 - 1.000 1.000 1.000 1.000 - - 1.000 synaptonemal complex protein 3 [Source:ZFIN;Acc:ZDB-GENE-040910-2]
2. grik5 ENSDARG00000101449, ENSDARG00000111384 75 1.99 1.000 - - - 0.990 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
3. LRFN2_1 LRFN2_1 17 1.886 1.000 - - - 0.886 - - - -
4. si:dkey-207m2.4 ENSDARG00000089831, ENSDARG00000100654 3 1.744 1.000 - - - - 0.744 - - - si:dkey-207m2.4 [Source:ZFIN;Acc:ZDB-GENE-081103-58]
5. si:dkey-163m14.7 65 1.73 0.927 - - - - 0.803 - - - si:dkey-163m14.7
6. si:ch73-29c22.1 ENSDARG00000090948 5 1.716 1.000 - - - 0.716 - - - - si:ch73-29c22.1 [Source:ZFIN;Acc:ZDB-GENE-091204-309]
7. snx8b ENSDARG00000078057 15 1.569 - - - 0.788 0.781 - - - - sorting nexin 8b [Source:ZFIN;Acc:ZDB-GENE-090313-317]
8. tmem167b ENSDARG00000059400 9 1.515 0.771 - - - - 0.744 - - - transmembrane protein 167B [Source:ZFIN;Acc:ZDB-GENE-040808-17]
9. shank2 ENSDARG00000062325 66 1 1.000 - - - - - - - - SH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
10. CABZ01059406.1 ENSDARG00000088775 1 1 1.000 - - - - - - - -
11. zgc:113307 ENSDARG00000044894 17 1 1.000 - - - - - - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
12. stxbp5l ENSDARG00000006383, ENSDARG00000110740 3 1 1.000 - - - - - - - - syntaxin binding protein 5-like [Source:ZFIN;Acc:ZDB-GENE-041210-220]
13. si:ch211-14g4.4 si:ch211-14g4.4 6 1 1.000 - - - - - - - -
14. si:dkeyp-53d3.3 ENSDARG00000098664 65 1 1.000 - - - - - - - - si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]
15. DLK1 60 1 1.000 - - - - - - - - delta like non-canonical Notch ligand 1
16. MAMDC4 MAMDC4 3 1 1.000 - - - - - - - -
17. NPBWR2 NPBWR2 132 1 1.000 - - - - - - - -
18. 5S_rRNA_22 5S_rRNA_22 45 1 1.000 - - - - - - - -
19. lrch4 ENSDARG00000068258 24 1 1.000 - - - - - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
20. CLDN20 26 1 1.000 - - - - - - - - claudin 20, transcript variant X2
21. LRRC4C ENSDARG00000113411 36 1 1.000 - - - - - - - - leucine rich repeat containing 4C [Source:ZFIN;Acc:ZDB-GENE-050522-533]
22. CABZ01084273.1 CABZ01084273.1 16 1 1.000 - - - - - - - -
23. PGBD4 ENSDARG00000079328 20 1 1.000 - - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
24. kcng1 ENSDARG00000099038 23 1 1.000 - - - - - - - - potassium voltage-gated channel, subfamily G, member 1 [Source:ZFIN;Acc:ZDB-GENE-080220-5]
25. zgc:101731 ENSDARG00000040965 27 1 1.000 - - - - - - - - zgc:101731 [Source:ZFIN;Acc:ZDB-GENE-040912-57]
26. VASH1 ENSDARG00000092716 33 1 1.000 - - - - - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
27. npffr2.1 npffr2.1 60 1 1.000 - - - - - - - -
28. si:ch73-57f22.2 ENSDARG00000087453 28 1 1.000 - - - - - - - - si:ch73-57f22.2 [Source:ZFIN;Acc:ZDB-GENE-110411-58]
29. zgc:77118 ENSDARG00000014208, ENSDARG00000093176 63 1 1.000 - - - - - - - - zgc:77118 [Source:ZFIN;Acc:ZDB-GENE-040426-2211]
30. trpm2 ENSDARG00000095696, ENSDARG00000101641 1 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily M, member 2 [Source:ZFIN;Acc:ZDB-GENE-061214-4]
31. si:dkey-199m13.8 si:dkey-199m13.8 61 1 1.000 - - - - - - - -
32. zdhhc12b ENSDARG00000052787 43 1 1.000 - - - - - - - - zinc finger, DHHC-type containing 12b [Source:ZFIN;Acc:ZDB-GENE-070705-356]
33. CABZ01078944.1 CABZ01078944.1 9 1 1.000 - - - - - - - -
34. BICD1 BICD1 9 1 1.000 - - - - - - - -
35. si:dkey-203o14.2 si:dkey-203o14.2 5 1 1.000 - - - - - - - -
36. rccd1_1 ENSDARG00000071074 24 1 1.000 - - - - - - - - RCC1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3552]
37. trpc1 ENSDARG00000061203 62 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-070830-1]
38. CABZ01053592.1 ENSDARG00000117388 6 1 1.000 - - - - - - - -
39. BX649314.1 BX649314.1 3 1 1.000 - - - - - - - -
40. AL929291.1 AL929291.1 16 1 1.000 - - - - - - - -
41. cnn1b ENSDARG00000102398 40 1 1.000 - - - - - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
42. CABZ01041804.1 CABZ01041804.1 312 1 1.000 - - - - - - - -
43. odf3l2 36 1 1.000 - - - - - - - - outer dense fiber of sperm tails 3-like 2
44. gdf10b ENSDARG00000073891 116 1 1.000 - - - - - - - - growth differentiation factor 10b [Source:ZFIN;Acc:ZDB-GENE-120316-1]
45. ENSDARG00000096199 ENSDARG00000096199 15 1 1.000 - - - - - - - -
46. TRAPPC9 ENSDARG00000099118 26 1 1.000 - - - - - - - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
47. CABZ01021454.2 CABZ01021454.2 3 1 1.000 - - - - - - - -
48. CABZ01113978.1 CABZ01113978.1 1 1 1.000 - - - - - - - -
49. BX548021.2 BX548021.2 4 1 1.000 - - - - - - - -
50. rbm10 ENSDARG00000077400 1 1 1.000 - - - - - - - - RNA binding motif protein 10 [Source:ZFIN;Acc:ZDB-GENE-100922-245]
51. zgc:153039 ENSDARG00000102724 4 1 1.000 - - - - - - - - zgc:153039 [Source:ZFIN;Acc:ZDB-GENE-060929-736]
52. synpr ENSDARG00000044278 20 1 1.000 - - - - - - - - synaptoporin [Source:ZFIN;Acc:ZDB-GENE-030616-625]
53. rnf217 ENSDARG00000060944 10 1 1.000 - - - - - - - - ring finger protein 217 [Source:ZFIN;Acc:ZDB-GENE-060503-400]
54. FAXC FAXC 102 1 1.000 - - - - - - - -
55. si:ch211-10j20.7 si:ch211-10j20.7 8 1 1.000 - - - - - - - -
56. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1 1.000 - - - - - - - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
57. BX323861.1 ENSDARG00000099765 37 1 1.000 - - - - - - - -
58. si:dkey-200l5.4 ENSDARG00000095294 13 1 1.000 - - - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
59. COX5B ENSDARG00000015978 70 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
60. CCL-C11B CCL-C11B 51 1 1.000 - - - - - - - -
61. mlphb ENSDARG00000062481 14 1 1.000 - - - - - - - - melanophilin b [Source:ZFIN;Acc:ZDB-GENE-070803-2]
62. BX914198.1 BX914198.1 5 1 1.000 - - - - - - - -
63. si:dkey-265k11.2 si:dkey-265k11.2 44 1 1.000 - - - - - - - -
64. s100t ENSDARG00000055589 453 1 1.000 - - - - - - - - S100 calcium binding protein T [Source:ZFIN;Acc:ZDB-GENE-050320-61]
65. jakmip2 ENSDARG00000053547 32 1 1.000 - - - - - - - - janus kinase and microtubule interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-293]
66. zgc:174694 zgc:174694 2 1 1.000 - - - - - - - -
67. elovl4a ENSDARG00000006773 412 1 1.000 - - - - - - - - ELOVL fatty acid elongase 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1767]
68. SNORA19 SNORA19 24 1 1.000 - - - - - - - -
69. si:dkey-66n24.2 si:dkey-66n24.2 69 1 1.000 - - - - - - - -
70. si:dkey-228i19.32 si:dkey-228i19.32 9 1 1.000 - - - - - - - -
71. chrm4a ENSDARG00000069254 32 1 1.000 - - - - - - - - cholinergic receptor, muscarinic 4a [Source:ZFIN;Acc:ZDB-GENE-090410-6]
72. tmem196b ENSDARG00000090140 20 1 1.000 - - - - - - - - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
73. ZDHHC12 ZDHHC12 29 1 1.000 - - - - - - - -
74. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 1.000 - - - - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
75. iqsec3b ENSDARG00000093091 10 1 1.000 - - - - - - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
76. trim9 ENSDARG00000039123 53 1 1.000 - - - - - - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
77. zgc:113210 ENSDARG00000002872 99 1 1.000 - - - - - - - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
78. si:dkey-150k17.3 33 1 1.000 - - - - - - - - si:dkey-150k17.3
79. grm6b ENSDARG00000025671, ENSDARG00000117152 118 1 1.000 - - - - - - - - glutamate receptor, metabotropic 6b [Source:ZFIN;Acc:ZDB-GENE-021120-2]
80. prdm11 ENSDARG00000074468 2 1 1.000 - - - - - - - - PR domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-061221-1]
81. CU570691.1 ENSDARG00000088908 5 1 1.000 - - - - - - - -
82. si:dkey-274m14.3 si:dkey-274m14.3 7 1 1.000 - - - - - - - -
83. ZNF337_11 ZNF337_11 11 1 1.000 - - - - - - - -
84. si:dkey-233h12.2 si:dkey-233h12.2 1 1 1.000 - - - - - - - -
85. GPR22 GPR22 33 1 1.000 - - - - - - - -
86. chst2b ENSDARG00000058585 33 1 1.000 - - - - - - - - carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b [Source:ZFIN;Acc:ZDB-GENE-060720-33]
87. ptprc ENSDARG00000071437 104 1 1.000 - - - - - - - - protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
88. BX470131.1 BX470131.1 86 1 1.000 - - - - - - - -
89. wfikkn1 ENSDARG00000101364 11 1 1.000 - - - - - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2465]
90. U6_30 U6_30 1 1 1.000 - - - - - - - -
91. kcnt1 ENSDARG00000079484 45 1 1.000 - - - - - - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
92. CR524483.1 ENSDARG00000109248 86 1 1.000 - - - - - - - - si:dkey-151p21.7 [Source:NCBI gene;Acc:562936]
93. CABZ01032469.1 CABZ01032469.1 34 1 1.000 - - - - - - - -
94. si:dkey-79c1.1 ENSDARG00000093179 11 1 1.000 - - - - - - - - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
95. MAST1 MAST1 29 1 1.000 - - - - - - - -
96. xkr8.1 ENSDARG00000004498 18 1 1.000 - - - - - - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-110106-1]
97. si:dkey-179k24.6 si:dkey-179k24.6 5 1 1.000 - - - - - - - -
98. DIP2B DIP2B 18 1 1.000 - - - - - - - -
99. si:ch211-216b21.2 ENSDARG00000060253 54 1 1.000 - - - - - - - - si:ch211-216b21.2 [Source:ZFIN;Acc:ZDB-GENE-130603-96]
100. ARHGEF40 ENSDARG00000078979 25 1 1.000 - - - - - - - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]

There are 526 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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