Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sycp1

Gene Name Gene ID Reads Annotation
sycp1 ENSDARG00000003904 8 synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]










Genes with expression patterns similar to sycp1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sycp1 ENSDARG00000003904 8 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
2. lyve1b ENSDARG00000062483 14 2.814 1.000 - - 0.814 - - 1.000 - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
3. CU984579.1 ENSDARG00000116863 15 2.613 1.000 - 0.780 - - 0.833 - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
4. CU464087.2 CU464087.2 15 2.563 - - - 0.814 - 0.877 - 0.872 -
5. si:ch211-210h11.7 si:ch211-210h11.7 32 2.5 1.000 - - - - 0.780 0.720 - -
6. CABZ01085054.1 CABZ01085054.1 20 2 1.000 - - - - - 1.000 - -
7. ifit2 ifit2 11 2 1.000 - - - - - 1.000 - -
8. si:zfos-979f1.2 ENSDARG00000011652 24 2 1.000 - - - - 1.000 - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
9. si:dkey-267i17.3 si:dkey-267i17.3 4 2 1.000 - - - - - 1.000 - -
10. ela2 ENSDARG00000056744, ENSDARG00000111667 73 2 1.000 - - - - - 1.000 - - elastase 2 [Source:ZFIN;Acc:ZDB-GENE-041117-1]
11. mipol1 ENSDARG00000104845 6 2 - - - - - - 1.000 1.000 - mirror-image polydactyly 1 [Source:ZFIN;Acc:ZDB-GENE-030131-41]
12. si:ch211-219a15.4 ENSDARG00000068951 3 2 1.000 - - - - - 1.000 - - si:ch211-219a15.4 [Source:ZFIN;Acc:ZDB-GENE-060503-308]
13. cysltr1 ENSDARG00000058246, ENSDARG00000116295 25 2 1.000 - - - - - 1.000 - - cysteinyl leukotriene receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-250]
14. si:ch211-194e1.8 si:ch211-194e1.8 14 2 1.000 - - - - - 1.000 - -
15. glipr1b ENSDARG00000030078 73 1.972 - - - - - 0.972 1.000 - - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
16. CABZ01074298.1 ENSDARG00000087767 6 1.877 - - - - - 0.877 1.000 - - uncharacterized LOC100334396 [Source:NCBI gene;Acc:100334396]
17. SOX8 SOX8 22 1.877 1.000 - - - - 0.877 - - -
18. ciita ENSDARG00000090851 5 1.877 1.000 - - - - 0.877 - - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
19. ssh1b ENSDARG00000010031 4 1.877 1.000 - - - - 0.877 - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
20. si:dkey-217m5.3 si:dkey-217m5.3 22 1.877 1.000 - - - - 0.877 - - -
21. cyb561 ENSDARG00000038176 55 1.876 1.000 - - - - - 0.876 - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
22. ucp3 ENSDARG00000091209 137 1.865 1.000 - 0.865 - - - - - - uncoupling protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1317]
23. muc13b ENSDARG00000079647 67 1.861 1.000 - - - - - 0.861 - - mucin 13b, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-080220-61]
24. si:dkey-25o1.6 si:dkey-25o1.6 5 1.814 - - - 0.814 - - 1.000 - -
25. CU633991.1 CU633991.1 16 1.814 - - - 0.814 - - 1.000 - -
26. CR753886.1 ENSDARG00000090548 22 1.814 - - - 0.814 - - 1.000 - - prolactin releasing hormone 2 [Source:NCBI gene;Acc:793765]
27. si:dkeyp-80d11.12 ENSDARG00000101728 4 1.814 - - - 0.814 - - 1.000 - - si:dkeyp-80d11.12 [Source:ZFIN;Acc:ZDB-GENE-070424-273]
28. CU652893.1 ENSDARG00000104131 3 1.814 - - - 0.814 - - 1.000 - -
29. ELFN2 ELFN2 7 1.814 - - - 0.814 - - 1.000 - -
30. itga2.2 ENSDARG00000062974 27 1.814 1.000 - - 0.814 - - - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-091118-70]
31. fermt3a fermt3a 56 1.797 1.000 - 0.797 - - - - - -
32. fgf24 ENSDARG00000037677 242 1.79 1.000 - - - - - 0.790 - - fibroblast growth factor 24 [Source:ZFIN;Acc:ZDB-GENE-030708-1]
33. zgc:194659 ENSDARG00000079347 17 1.78 - - 0.780 - - - 1.000 - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
34. allc ENSDARG00000042562 12 1.78 - - 0.780 - - - - 1.000 - allantoicase [Source:ZFIN;Acc:ZDB-GENE-040718-471]
35. SNORA81_1 SNORA81_1 8 1.754 1.000 - - 0.754 - - - - -
36. myo5ab ENSDARG00000025218 14 1.748 1.000 - 0.748 - - - - - - myosin VAb [Source:ZFIN;Acc:ZDB-GENE-050411-72]
37. ANKRD34A 22 1.746 0.746 - - - - - 1.000 - - ankyrin repeat domain 34A, transcript variant X2
38. irgq2 ENSDARG00000068657 4 1.744 1.000 - - - - - - - 0.744 immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
39. FP102169.1 ENSDARG00000110967 1 1.744 - - - - - - 1.000 - 0.744 secreted frizzled-related protein 5-like [Source:NCBI gene;Acc:101884738]
40. zgc:110249 ENSDARG00000035221 68 1.738 - - - - - 0.738 1.000 - - zgc:110249 [Source:ZFIN;Acc:ZDB-GENE-050522-331]
41. si:ch211-10p21.1 si:ch211-10p21.1 6 1.721 1.000 - 0.721 - - - - - -
42. si:ch73-299h12.1 ENSDARG00000102321 233 1.72 1.000 - - - - - 0.720 - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
43. C22H19orf10_1 C22H19orf10_1 30 1.713 - - - - 0.836 0.877 - - -
44. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1.712 1.000 - - - 0.712 - - - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
45. si:ch211-150j10.4 ENSDARG00000079336 23 1.706 - - - - 0.961 - 0.745 - - si:ch211-150j10.4 [Source:ZFIN;Acc:ZDB-GENE-110411-215]
46. c1qa ENSDARG00000044613, ENSDARG00000109639 35 1.703 0.915 - - - - 0.788 - - - complement component 1, q subcomponent, A chain [Source:ZFIN;Acc:ZDB-GENE-050522-86]
47. si:ch211-161h7.5 ENSDARG00000093044 12 1.659 - - - 0.814 - - - - 0.845 si:ch211-161h7.5 [Source:ZFIN;Acc:ZDB-GENE-091204-265]
48. ttc25 ENSDARG00000058140 2 1.657 - - 0.780 - - 0.877 - - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
49. si:ch211-267j24.2 si:ch211-267j24.2 7 1.657 - - 0.780 - - 0.877 - - -
50. si:dkey-13n15.11 ENSDARG00000078002 8 1.657 - - 0.780 - - 0.877 - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
51. si:dkey-242k1.6 ENSDARG00000101205 112 1.639 - - - - - 0.892 0.747 - - si:dkey-242k1.6 [Source:ZFIN;Acc:ZDB-GENE-041008-84]
52. CPNE7 ENSDARG00000102584 95 1.625 0.746 - - - 0.879 - - - - copine VII [Source:ZFIN;Acc:ZDB-GENE-131125-70]
53. si:dkey-53f14.2 si:dkey-53f14.2 4 1.621 - - - - - 0.877 - - 0.744
54. traf7 ENSDARG00000060207 20 1.598 - - - 0.839 - 0.759 - - - TNF receptor-associated factor 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2212]
55. si:dkey-200l5.4 ENSDARG00000095294 13 1.597 - - - - - 0.877 0.720 - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
56. LRFN4_1 LRFN4_1 5 1.594 - - 0.780 0.814 - - - - -
57. rrnad1 ENSDARG00000089033 69 1.589 - - - - 0.844 - 0.745 - - ribosomal RNA adenine dimethylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-515]
58. zgc:162184 ENSDARG00000077217 47 1.566 - - - - 0.788 - 0.778 - - zgc:162184 [Source:ZFIN;Acc:ZDB-GENE-070424-83]
59. avpr2l ENSDARG00000076690 3 1.558 - - - 0.814 - - - - 0.744 arginine vasopressin receptor 2, like [Source:ZFIN;Acc:ZDB-GENE-070705-429]
60. si:dkey-11e23.3 si:dkey-11e23.3 3 1.534 - - 0.780 0.754 - - - - -
61. GABRA3 ENSDARG00000090883 5 1.524 - - 0.780 - - - - - 0.744 gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
62. rap2ab ENSDARG00000040246 63 1.512 0.746 - - - - 0.766 - - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
63. SH2D2A SH2D2A 31 1.478 - - - 0.741 - - - 0.737 -
64. CABZ01071530.2 CABZ01071530.2 47 1.459 - - - - - 0.714 0.745 - -
65. si:dkey-272j9.1 si:dkey-272j9.1 10 1 - - - - - - 1.000 - -
66. si:ch211-170d12.2 si:ch211-170d12.2 1 1 1.000 - - - - - - - -
67. si:dkey-16p6.1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 0 1 - - - - - - 1.000 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
68. TMEM221 TMEM221 62 1 1.000 - - - - - - - -
69. rfx6 ENSDARG00000041702 0 1 - - - - - - 1.000 - - regulatory factor X, 6 [Source:ZFIN;Acc:ZDB-GENE-041014-299]
70. F2RL3 ENSDARG00000079399 29 1 1.000 - - - - - - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
71. edn1 ENSDARG00000036912 74 1 1.000 - - - - - - - - endothelin 1 [Source:ZFIN;Acc:ZDB-GENE-000920-1]
72. CABZ01076234.1 CABZ01076234.1 49 1 - - - - - - 1.000 - -
73. ENSDARG00000089100 ENSDARG00000089100 5 1 - - - - - - 1.000 - -
74. zp2.5 ENSDARG00000086522 15 1 1.000 - - - - - - - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
75. si:dkey-167k11.3 si:dkey-167k11.3 3 1 - - - - - - 1.000 - -
76. ccdc85a ENSDARG00000039497 24 1 - - - - - - 1.000 - - coiled-coil domain containing 85A [Source:ZFIN;Acc:ZDB-GENE-080220-55]
77. KAZN_1 KAZN_1 13 1 1.000 - - - - - - - -
78. lsm14b ENSDARG00000025386 23 1 - - - - - - 1.000 - - LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779]
79. slc6a6b ENSDARG00000098438 7 1 1.000 - - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
80. Metazoa_SRP_2 Metazoa_SRP_2 2 1 1.000 - - - - - - - -
81. si:ch211-235f1.3 ENSDARG00000095179 27 1 - - - - - - 1.000 - - si:ch211-235f1.3 [Source:ZFIN;Acc:ZDB-GENE-091204-440]
82. GRIN3B GRIN3B 16 1 1.000 - - - - - - - -
83. stx17 ENSDARG00000006869 24 1 - - - - - - 1.000 - - syntaxin 17 [Source:ZFIN;Acc:ZDB-GENE-041114-164]
84. si:dkey-192i18.3 si:dkey-192i18.3 47 1 - - - - - 1.000 - - -
85. reep6 ENSDARG00000087349 0 1 - - - - - - 1.000 - - receptor accessory protein 6 [Source:ZFIN;Acc:ZDB-GENE-040912-98]
86. C1S_1 C1S_1 11 1 - - - - - - 1.000 - -
87. si:dkeyp-59c12.1 ENSDARG00000038112 186 1 1.000 - - - - - - - - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
88. FAM188B2 4 1 - - - - - - 1.000 - - family with sequence similarity 188, member B2
89. si:ch211-120k19.3 si:ch211-120k19.3 5 1 - - - - - - 1.000 - -
90. si:dkey-157g20.2 si:dkey-157g20.2 29 1 - - - - - - 1.000 - -
91. vsig8a ENSDARG00000054050, ENSDARG00000114869 69 1 1.000 - - - - - - - - V-set and immunoglobulin domain containing 8a [Source:ZFIN;Acc:ZDB-GENE-050417-338]
92. BX005022.1 ENSDARG00000114221 0 1 - - - - - - 1.000 - -
93. zgc:172271 ENSDARG00000013240 2 1 - - - - - - 1.000 - - zgc:172271 [Source:ZFIN;Acc:ZDB-GENE-080204-110]
94. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 1 1.000 - - - - - - - - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
95. KLHL38 KLHL38 15 1 1.000 - - - - - - - -
96. mei4 ENSDARG00000043912 10 1 1.000 - - - - - - - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
97. zgc:194551 ENSDARG00000114948, ENSDARG00000115221 24 1 - - - - - - 1.000 - - zgc:194551 [Source:ZFIN;Acc:ZDB-GENE-030131-4878]
98. pnpla4 ENSDARG00000069834, ENSDARG00000110613 15 1 - - - - - - 1.000 - - patatin-like phospholipase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070410-74]
99. abcg5 ENSDARG00000063078, ENSDARG00000115809 0 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family G (WHITE), member 5 [Source:ZFIN;Acc:ZDB-GENE-050517-40]
100. CACNA1E 18 1 - - - - - - 1.000 - - calcium voltage-gated channel subunit alpha1 E, transcript variant X6

There are 1222 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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