Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sycp1

Gene Name Gene ID Reads Annotation
sycp1 ENSDARG00000003904 8 synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]










Genes with expression patterns similar to sycp1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sycp1 ENSDARG00000003904 8 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
2. lyve1b ENSDARG00000062483 14 2.814 1.000 - - 0.814 - - 1.000 - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
3. CU984579.1 ENSDARG00000116863 15 2.613 1.000 - 0.780 - - 0.833 - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
4. CU464087.2 CU464087.2 15 2.563 - - - 0.814 - 0.877 - 0.872 -
5. si:ch211-210h11.7 si:ch211-210h11.7 32 2.5 1.000 - - - - 0.780 0.720 - -
6. ifit2 ifit2 11 2 1.000 - - - - - 1.000 - -
7. si:zfos-979f1.2 ENSDARG00000011652 24 2 1.000 - - - - 1.000 - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
8. si:ch211-194e1.8 si:ch211-194e1.8 14 2 1.000 - - - - - 1.000 - -
9. ela2 ENSDARG00000056744, ENSDARG00000111667 73 2 1.000 - - - - - 1.000 - - elastase 2 [Source:ZFIN;Acc:ZDB-GENE-041117-1]
10. CABZ01085054.1 CABZ01085054.1 20 2 1.000 - - - - - 1.000 - -
11. mipol1 ENSDARG00000104845 6 2 - - - - - - 1.000 1.000 - mirror-image polydactyly 1 [Source:ZFIN;Acc:ZDB-GENE-030131-41]
12. si:dkey-267i17.3 si:dkey-267i17.3 4 2 1.000 - - - - - 1.000 - -
13. cysltr1 ENSDARG00000058246, ENSDARG00000116295 25 2 1.000 - - - - - 1.000 - - cysteinyl leukotriene receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-250]
14. si:ch211-219a15.4 ENSDARG00000068951 3 2 1.000 - - - - - 1.000 - - si:ch211-219a15.4 [Source:ZFIN;Acc:ZDB-GENE-060503-308]
15. glipr1b ENSDARG00000030078 73 1.972 - - - - - 0.972 1.000 - - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
16. CABZ01074298.1 ENSDARG00000087767 6 1.877 - - - - - 0.877 1.000 - - uncharacterized LOC100334396 [Source:NCBI gene;Acc:100334396]
17. ssh1b ENSDARG00000010031 4 1.877 1.000 - - - - 0.877 - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
18. si:dkey-217m5.3 si:dkey-217m5.3 22 1.877 1.000 - - - - 0.877 - - -
19. ciita ENSDARG00000090851 5 1.877 1.000 - - - - 0.877 - - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
20. SOX8 SOX8 22 1.877 1.000 - - - - 0.877 - - -
21. cyb561 ENSDARG00000038176 55 1.876 1.000 - - - - - 0.876 - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
22. ucp3 ENSDARG00000091209 137 1.865 1.000 - 0.865 - - - - - - uncoupling protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1317]
23. muc13b ENSDARG00000079647 67 1.861 1.000 - - - - - 0.861 - - mucin 13b, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-080220-61]
24. CR753886.1 ENSDARG00000090548 22 1.814 - - - 0.814 - - 1.000 - - prolactin releasing hormone 2 [Source:NCBI gene;Acc:793765]
25. si:dkeyp-80d11.12 ENSDARG00000101728 4 1.814 - - - 0.814 - - 1.000 - - si:dkeyp-80d11.12 [Source:ZFIN;Acc:ZDB-GENE-070424-273]
26. CU633991.1 CU633991.1 16 1.814 - - - 0.814 - - 1.000 - -
27. ELFN2 ELFN2 7 1.814 - - - 0.814 - - 1.000 - -
28. CU652893.1 ENSDARG00000104131 3 1.814 - - - 0.814 - - 1.000 - -
29. si:dkey-25o1.6 si:dkey-25o1.6 5 1.814 - - - 0.814 - - 1.000 - -
30. itga2.2 ENSDARG00000062974 27 1.814 1.000 - - 0.814 - - - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-091118-70]
31. fermt3a fermt3a 56 1.797 1.000 - 0.797 - - - - - -
32. fgf24 ENSDARG00000037677 242 1.79 1.000 - - - - - 0.790 - - fibroblast growth factor 24 [Source:ZFIN;Acc:ZDB-GENE-030708-1]
33. allc ENSDARG00000042562 12 1.78 - - 0.780 - - - - 1.000 - allantoicase [Source:ZFIN;Acc:ZDB-GENE-040718-471]
34. zgc:194659 ENSDARG00000079347 17 1.78 - - 0.780 - - - 1.000 - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
35. SNORA81_1 SNORA81_1 8 1.754 1.000 - - 0.754 - - - - -
36. myo5ab ENSDARG00000025218 14 1.748 1.000 - 0.748 - - - - - - myosin VAb [Source:ZFIN;Acc:ZDB-GENE-050411-72]
37. ANKRD34A 22 1.746 0.746 - - - - - 1.000 - - ankyrin repeat domain 34A, transcript variant X2
38. irgq2 ENSDARG00000068657 4 1.744 1.000 - - - - - - - 0.744 immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
39. FP102169.1 ENSDARG00000110967 1 1.744 - - - - - - 1.000 - 0.744 secreted frizzled-related protein 5-like [Source:NCBI gene;Acc:101884738]
40. zgc:110249 ENSDARG00000035221 68 1.738 - - - - - 0.738 1.000 - - zgc:110249 [Source:ZFIN;Acc:ZDB-GENE-050522-331]
41. si:ch211-10p21.1 si:ch211-10p21.1 6 1.721 1.000 - 0.721 - - - - - -
42. si:ch73-299h12.1 ENSDARG00000102321 233 1.72 1.000 - - - - - 0.720 - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
43. C22H19orf10_1 C22H19orf10_1 30 1.713 - - - - 0.836 0.877 - - -
44. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1.712 1.000 - - - 0.712 - - - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
45. si:ch211-150j10.4 ENSDARG00000079336 23 1.706 - - - - 0.961 - 0.745 - - si:ch211-150j10.4 [Source:ZFIN;Acc:ZDB-GENE-110411-215]
46. c1qa ENSDARG00000044613, ENSDARG00000109639 35 1.703 0.915 - - - - 0.788 - - - complement component 1, q subcomponent, A chain [Source:ZFIN;Acc:ZDB-GENE-050522-86]
47. si:ch211-161h7.5 ENSDARG00000093044 12 1.659 - - - 0.814 - - - - 0.845 si:ch211-161h7.5 [Source:ZFIN;Acc:ZDB-GENE-091204-265]
48. ttc25 ENSDARG00000058140 2 1.657 - - 0.780 - - 0.877 - - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
49. si:dkey-13n15.11 ENSDARG00000078002 8 1.657 - - 0.780 - - 0.877 - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
50. si:ch211-267j24.2 si:ch211-267j24.2 7 1.657 - - 0.780 - - 0.877 - - -
51. si:dkey-242k1.6 ENSDARG00000101205 112 1.639 - - - - - 0.892 0.747 - - si:dkey-242k1.6 [Source:ZFIN;Acc:ZDB-GENE-041008-84]
52. CPNE7 ENSDARG00000102584 95 1.625 0.746 - - - 0.879 - - - - copine VII [Source:ZFIN;Acc:ZDB-GENE-131125-70]
53. si:dkey-53f14.2 si:dkey-53f14.2 4 1.621 - - - - - 0.877 - - 0.744
54. traf7 ENSDARG00000060207 20 1.598 - - - 0.839 - 0.759 - - - TNF receptor-associated factor 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2212]
55. si:dkey-200l5.4 ENSDARG00000095294 13 1.597 - - - - - 0.877 0.720 - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
56. LRFN4_1 LRFN4_1 5 1.594 - - 0.780 0.814 - - - - -
57. rrnad1 ENSDARG00000089033 69 1.589 - - - - 0.844 - 0.745 - - ribosomal RNA adenine dimethylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-515]
58. zgc:162184 ENSDARG00000077217 47 1.566 - - - - 0.788 - 0.778 - - zgc:162184 [Source:ZFIN;Acc:ZDB-GENE-070424-83]
59. avpr2l ENSDARG00000076690 3 1.558 - - - 0.814 - - - - 0.744 arginine vasopressin receptor 2, like [Source:ZFIN;Acc:ZDB-GENE-070705-429]
60. si:dkey-11e23.3 si:dkey-11e23.3 3 1.534 - - 0.780 0.754 - - - - -
61. GABRA3 ENSDARG00000090883 5 1.524 - - 0.780 - - - - - 0.744 gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
62. rap2ab ENSDARG00000040246 63 1.512 0.746 - - - - 0.766 - - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
63. SH2D2A SH2D2A 31 1.478 - - - 0.741 - - - 0.737 -
64. CABZ01071530.2 CABZ01071530.2 47 1.459 - - - - - 0.714 0.745 - -
65. si:dkey-26g8.9 si:dkey-26g8.9 2 1 1.000 - - - - - - - -
66. mettl21a ENSDARG00000012051 86 1 1.000 - - - - - - - - methyltransferase like 21A [Source:ZFIN;Acc:ZDB-GENE-050320-145]
67. grapa ENSDARG00000005414 29 1 - - - - - - 1.000 - - GRB2 related adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-050522-347]
68. sdk1b ENSDARG00000062854 16 1 1.000 - - - - - - - - sidekick cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-090311-17]
69. syne3 ENSDARG00000023237 23 1 - - - - - - 1.000 - - spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
70. CR847543.1 ENSDARG00000086708 155 1 1.000 - - - - - - - -
71. nog3 ENSDARG00000053528, ENSDARG00000116141, ENSDARG00000116361 1 1 - - - - - - - 1.000 - noggin 3 [Source:ZFIN;Acc:ZDB-GENE-990714-8]
72. ms4a17a.4 ENSDARG00000014024 36 1 - - - - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 17A.4 [Source:ZFIN;Acc:ZDB-GENE-070822-16]
73. ppfia2 ENSDARG00000013000 45 1 - - - - - - 1.000 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7905]
74. HEPACAM ENSDARG00000112032 1 1 - - - - - - 1.000 - - hepatic and glial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:26361]
75. Metazoa_SRP_23 Metazoa_SRP_23 3 1 1.000 - - - - - - - -
76. zgc:92658 8 1 1.000 - - - - - - - - zgc:92658
77. try 21 1 - - - - - - 1.000 - - trypsin
78. col17a1a ENSDARG00000069415 52 1 - - - - - - 1.000 - - collagen, type XVII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090313-107]
79. SNORD89 SNORD89 1 1 1.000 - - - - - - - -
80. RDM1 RDM1 28 1 - - - - - - 1.000 - -
81. BX255969.1 BX255969.1 16 1 - - - - - - 1.000 - -
82. CR936442.1 ENSDARG00000105592 2 1 - - - - - - 1.000 - -
83. DNHD1 DNHD1 4 1 - - - - - 1.000 - - -
84. TAF4_1 TAF4_1 30 1 1.000 - - - - - - - -
85. MEIS2 MEIS2 3 1 - - - - - - - 1.000 -
86. si:ch211-196h16.5 ENSDARG00000069264 1 1 - - - - - - - 1.000 - si:ch211-196h16.5 [Source:ZFIN;Acc:ZDB-GENE-081029-8]
87. wisp2 ENSDARG00000077882 3 1 - - - - - - 1.000 - - WNT1 inducible signaling pathway protein 2 [Source:ZFIN;Acc:ZDB-GENE-060223-1]
88. ptger4a ENSDARG00000059236 13 1 - - - - - - 1.000 - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
89. arl8 ENSDARG00000094709 6 1 1.000 - - - - - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
90. cfhl5 ENSDARG00000105052 25 1 1.000 - - - - - - - - complement factor H like 5 [Source:ZFIN;Acc:ZDB-GENE-050208-782]
91. BX572630.2 BX572630.2 0 1 - - - - - - 1.000 - -
92. CT027800.1 CT027800.1 36 1 1.000 - - - - - - - -
93. FHDC1_3 FHDC1_3 66 1 - - - - - - 1.000 - -
94. SIRT4 ENSDARG00000010415 118 1 - - - - - - 1.000 - - sirtuin 4 [Source:ZFIN;Acc:ZDB-GENE-041010-65]
95. znf330 ENSDARG00000020494 3 1 - - - - - - 1.000 - - zinc finger protein 330 [Source:ZFIN;Acc:ZDB-GENE-040426-2697]
96. katna1 ENSDARG00000021827 221 1 1.000 - - - - - - - - katanin p60 (ATPase containing) subunit A 1 [Source:ZFIN;Acc:ZDB-GENE-050522-514]
97. SLC16A7 ENSDARG00000098258 4 1 - - - - - - - - 1.000 solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
98. VDAC3 ENSDARG00000003695 34 1 - - - - - - 1.000 - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
99. rfx6 ENSDARG00000041702 0 1 - - - - - - 1.000 - - regulatory factor X, 6 [Source:ZFIN;Acc:ZDB-GENE-041014-299]
100. MAP3K13 ENSDARG00000009493 8 1 1.000 - - - - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]

There are 1222 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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