Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for swt1

Gene Name Gene ID Reads Annotation
swt1 ENSDARG00000094010 472 SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]










Genes with expression patterns similar to swt1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. swt1 ENSDARG00000094010 472 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
2. si:dkey-169i5.4 ENSDARG00000077862 511 2.721 0.938 - - 0.848 - - 0.935 - - si:dkey-169i5.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8695]
3. wdr35 ENSDARG00000069269 492 2.605 0.979 0.761 - - - - - 0.865 - WD repeat domain 35 [Source:ZFIN;Acc:ZDB-GENE-060810-148]
4. si:ch211-269i23.2 432 2.345 - 0.729 - - - 0.778 0.838 - - si:ch211-269i23.2, transcript variant X3
5. pctp ENSDARG00000073985 405 2.321 - 0.717 - 0.804 - - - 0.800 - phosphatidylcholine transfer protein [Source:ZFIN;Acc:ZDB-GENE-081022-182]
6. zgc:113119 ENSDARG00000089142 281 2.32 - 0.755 0.753 0.812 - - - - - zgc:113119 [Source:ZFIN;Acc:ZDB-GENE-050327-3]
7. dapp1 ENSDARG00000039535 23 1.886 - - - - - 0.930 0.956 - - dual adaptor of phosphotyrosine and 3-phosphoinositides [Source:ZFIN;Acc:ZDB-GENE-050417-180]
8. si:ch211-254c8.2 233 1.841 0.984 - - - - 0.857 - - - si:ch211-254c8.2, transcript variant X4
9. si:dkey-178e17.3 ENSDARG00000058658 271 1.828 0.941 - - - - - - 0.887 - si:dkey-178e17.3 [Source:ZFIN;Acc:ZDB-GENE-081104-335]
10. thap4 ENSDARG00000077323 434 1.824 0.966 - - 0.858 - - - - - THAP domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-5]
11. cib1 ENSDARG00000103118 291 1.824 0.982 - - - - - 0.842 - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
12. CABZ01079241.1 ENSDARG00000098424 88 1.812 - - - - - - 0.931 0.881 - zinc finger Y-chromosomal protein 1-like [Source:NCBI gene;Acc:563292]
13. zgc:173570 ENSDARG00000037645, ENSDARG00000114242 46 1.805 - - - - - - 0.937 0.868 - zgc:173570 [Source:ZFIN;Acc:ZDB-GENE-080218-15]
14. C2H7orf25 C2H7orf25 209 1.802 0.987 - - - - - 0.815 - -
15. pde10a ENSDARG00000003449 60 1.796 - - - - - - 0.888 0.908 - phosphodiesterase 10A [Source:ZFIN;Acc:ZDB-GENE-040426-1115]
16. tm9sf1 ENSDARG00000022970 113 1.792 - - - 0.921 - - 0.871 - - transmembrane 9 superfamily member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-64]
17. AL929022.2 AL929022.2 567 1.788 0.966 - - - - - - 0.822 -
18. brd9 ENSDARG00000017143 936 1.778 0.932 - - - - - - 0.846 - bromodomain containing 9 [Source:ZFIN;Acc:ZDB-GENE-060502-1]
19. si:dkey-183n20.2 si:dkey-183n20.2 210 1.774 - - - 0.881 - - - 0.893 -
20. RPS11 ENSDARG00000053058 32 1.774 - - - - - 0.882 - 0.892 - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
21. BX005085.2 ENSDARG00000098122 196 1.77 0.968 - - 0.802 - - - - -
22. rasl12 ENSDARG00000002701 66 1.77 - - - 0.856 - - 0.914 - - RAS-like, family 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1201]
23. NFRKB ENSDARG00000091512 646 1.766 0.962 - - 0.804 - - - - - nuclear factor related to kappaB binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6419]
24. pigm ENSDARG00000024277 86 1.754 - - - - - 0.823 0.931 - - phosphatidylinositol glycan anchor biosynthesis, class M [Source:ZFIN;Acc:ZDB-GENE-040426-1393]
25. zgc:174888 ENSDARG00000077176, ENSDARG00000114997 166 1.751 - - - - - 0.821 0.930 - - zgc:174888 [Source:ZFIN;Acc:ZDB-GENE-030328-33]
26. mpv17l2 ENSDARG00000056367, ENSDARG00000112107 352 1.749 0.893 - - 0.856 - - - - - MPV17 mitochondrial membrane protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-306]
27. mycbp ENSDARG00000091001 1511 1.736 0.921 - - 0.815 - - - - - c-myc binding protein [Source:ZFIN;Acc:ZDB-GENE-060331-97]
28. ALPK1 195 1.732 0.963 0.769 - - - - - - - alpha-kinase 1
29. exd3 ENSDARG00000063140 119 1.73 - 0.820 - - - 0.910 - - - exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
30. si:dkeyp-100a1.6 ENSDARG00000092141 33 1.729 - 0.773 - - - - 0.956 - - si:dkeyp-100a1.6 [Source:ZFIN;Acc:ZDB-GENE-081104-448]
31. EPS8L2 ENSDARG00000058108 484 1.727 0.973 - - - - - 0.754 - - EPS8 like 2 [Source:ZFIN;Acc:ZDB-GENE-131121-340]
32. ankrd10b ENSDARG00000004771 654 1.719 0.966 - - 0.753 - - - - - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
33. si:ch211-93f2.1 ENSDARG00000101726, ENSDARG00000104818 708 1.718 0.852 - - 0.866 - - - - - si:ch211-93f2.1 [Source:ZFIN;Acc:ZDB-GENE-041014-96]
34. glipr2l ENSDARG00000016837 440 1.718 0.942 - - 0.776 - - - - - GLI pathogenesis-related 2, like [Source:ZFIN;Acc:ZDB-GENE-041010-53]
35. tnfrsf1a ENSDARG00000018569 842 1.717 0.956 - - - - - 0.761 - - tumor necrosis factor receptor superfamily, member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2252]
36. ugt5b4 ENSDARG00000091916 130 1.713 0.988 - - - - 0.725 - - - UDP glucuronosyltransferase 5 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-070112-2332]
37. OSBPL3 OSBPL3 145 1.71 - - - - - 0.889 0.821 - -
38. PAOX PAOX 251 1.708 - - - 0.884 - - - 0.824 -
39. vps11 ENSDARG00000036338 421 1.704 0.984 - - 0.720 - - - - - vacuolar protein sorting 11 [Source:ZFIN;Acc:ZDB-GENE-050731-5]
40. ERO1LB ERO1LB 1433 1.698 0.971 - - 0.727 - - - - -
41. pvrl4 155 1.694 - - - - - 0.866 - 0.828 - poliovirus receptor-related 4
42. eva1ba ENSDARG00000102701 1480 1.686 0.932 - - - - - - 0.754 - eva-1 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-8941]
43. smtla ENSDARG00000038191 42 1.677 - 0.743 - - - - 0.934 - - somatolactin alpha [Source:ZFIN;Acc:ZDB-GENE-060123-2]
44. LONRF2 LONRF2 721 1.675 0.952 0.723 - - - - - - -
45. cmtm6 ENSDARG00000099631 641 1.671 0.955 - - - - - 0.716 - - CKLF-like MARVEL transmembrane domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030729-15]
46. GABRR1 ENSDARG00000043902 71 1.668 - - - 0.898 - 0.770 - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
47. cdk4 ENSDARG00000087937 80 1.665 - 0.751 - - - - 0.914 - - cyclin-dependent kinase 4 [Source:ZFIN;Acc:ZDB-GENE-060929-974]
48. CR383676.3_1 CR383676.3_1 177 1.657 - - - 0.889 - 0.768 - - -
49. CABZ01078515.1 CABZ01078515.1 25 1.656 - 0.726 - - - 0.930 - - -
50. mtmr2 ENSDARG00000004616 1052 1.654 - 0.774 - - - - - 0.880 - myotubularin related protein 2 [Source:ZFIN;Acc:ZDB-GENE-990715-14]
51. wdr73 ENSDARG00000023152, ENSDARG00000111497 217 1.65 - - - - - - 0.892 0.758 - WD repeat domain 73 [Source:ZFIN;Acc:ZDB-GENE-050417-126]
52. CABZ01064972.1 ENSDARG00000098966 199 1.65 0.746 - - 0.904 - - - - - uncharacterized LOC100538212 [Source:NCBI gene;Acc:100538212]
53. efhc1 ENSDARG00000009743 113 1.647 - 0.807 - - - - - 0.840 - EF-hand domain (C-terminal) containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1300]
54. tmem176l.3a ENSDARG00000098387 168 1.646 - 0.744 - - - - - 0.902 - transmembrane protein 176l.3a [Source:ZFIN;Acc:ZDB-GENE-080829-13]
55. itga11b ENSDARG00000007950 17 1.644 - 0.727 - - - - 0.917 - - integrin, alpha 11b [Source:ZFIN;Acc:ZDB-GENE-071009-4]
56. leo1 ENSDARG00000055357 1644 1.638 0.857 - - - - - 0.781 - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
57. si:ch73-186j5.4 si:ch73-186j5.4 70 1.631 - 0.706 - - - - 0.925 - -
58. C17H14orf1 C17H14orf1 256 1.631 - 0.769 - 0.862 - - - - -
59. pi4kaa ENSDARG00000076724 1949 1.625 0.897 - - - - - 0.728 - - phosphatidylinositol 4-kinase, catalytic, alpha a [Source:ZFIN;Acc:ZDB-GENE-100204-2]
60. cx28.6 ENSDARG00000003925 146 1.625 - - - - - 0.818 - 0.807 - connexin 28.6 [Source:ZFIN;Acc:ZDB-GENE-040406-4]
61. zgc:113411 ENSDARG00000038133, ENSDARG00000112781 68 1.621 - 0.721 - - - - - 0.900 - zgc:113411 [Source:ZFIN;Acc:ZDB-GENE-050417-474]
62. has2 ENSDARG00000036987 349 1.618 - - - - - - 0.915 0.703 - hyaluronan synthase 2 [Source:ZFIN;Acc:ZDB-GENE-020828-1]
63. gfm2 ENSDARG00000005561 302 1.616 - - - - - 0.729 0.887 - - G elongation factor, mitochondrial 2 [Source:ZFIN;Acc:ZDB-GENE-060201-3]
64. slc43a3b ENSDARG00000057949 194 1.616 - - - - - - 0.832 0.784 - solute carrier family 43, member 3b [Source:ZFIN;Acc:ZDB-GENE-060312-28]
65. rnft1 ENSDARG00000015917, ENSDARG00000116783 1197 1.616 - - - - - 0.767 0.849 - - ring finger protein, transmembrane 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2324]
66. tjp3 ENSDARG00000002909 1978 1.612 0.851 - - - - - 0.761 - - tight junction protein 3 [Source:ZFIN;Acc:ZDB-GENE-030828-10]
67. rgl2 ENSDARG00000007727 1096 1.609 0.900 0.709 - - - - - - - ral guanine nucleotide dissociation stimulator-like 2 [Source:ZFIN;Acc:ZDB-GENE-010131-1]
68. ARHGEF15 ENSDARG00000100293 553 1.609 - - - - - 0.778 - 0.831 - Rho guanine nucleotide exchange factor (GEF) 15 [Source:ZFIN;Acc:ZDB-GENE-060526-292]
69. phf20b ENSDARG00000038737, ENSDARG00000111662, ENSDARG00000116554 1385 1.606 0.903 - - - - - 0.703 - - PHD finger protein 20, b [Source:ZFIN;Acc:ZDB-GENE-040822-33]
70. si:dkey-229b18.3 ENSDARG00000095912 568 1.604 - - - - - 0.739 - 0.865 - si:dkey-229b18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-6870]
71. gemin5 ENSDARG00000079257 152 1.603 - 0.739 - - - - 0.864 - - gem (nuclear organelle) associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-031112-9]
72. znf800b ENSDARG00000039843 205 1.602 - 0.762 - - - - - 0.840 - zinc finger protein 800b [Source:ZFIN;Acc:ZDB-GENE-040426-1166]
73. thbs2b ENSDARG00000073810 870 1.599 - - 0.722 - - - 0.877 - - thrombospondin 2b [Source:ZFIN;Acc:ZDB-GENE-100623-1]
74. arhgap29b ENSDARG00000017748 812 1.598 - 0.761 - - - - 0.837 - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
75. atpv0e1 atpv0e1 1957 1.595 0.766 - - - - - 0.829 - -
76. grk4_1 ENSDARG00000070448 511 1.588 - 0.787 - - - - - 0.801 - G protein-coupled receptor kinase 4 [Source:ZFIN;Acc:ZDB-GENE-060929-1198]
77. kbtbd4 ENSDARG00000069271, ENSDARG00000109347 253 1.587 - 0.776 - - - 0.811 - - - kelch repeat and BTB (POZ) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040426-937]
78. hmbox1b 597 1.573 - - - 0.773 - - - 0.800 - homeobox containing 1 b, transcript variant X3
79. plek2 ENSDARG00000012789 102 1.569 - - - - - 0.701 0.868 - - pleckstrin 2 [Source:ZFIN;Acc:ZDB-GENE-080219-2]
80. thrb ENSDARG00000021163 262 1.563 - - 0.749 - - 0.814 - - - thyroid hormone receptor beta [Source:ZFIN;Acc:ZDB-GENE-990415-268]
81. IL17RD ENSDARG00000098359 2309 1.563 0.848 - - - - - 0.715 - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
82. CR478286.1_1 CR478286.1_1 306 1.563 - - 0.724 - - - 0.839 - -
83. smarcc1a ENSDARG00000017397 2957 1.557 0.825 - - - - - 0.732 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a [Source:ZFIN;Acc:ZDB-GENE-080514-3]
84. ATP5SL ATP5SL 130 1.556 - - - - 0.719 - - 0.837 -
85. ERGIC2 ENSDARG00000051936, ENSDARG00000111918 244 1.556 - 0.743 - - - 0.813 - - - ERGIC and golgi 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1331]
86. THEG ENSDARG00000078644 121 1.556 - - 0.729 - - - 0.827 - - theg spermatid protein [Source:ZFIN;Acc:ZDB-GENE-070912-59]
87. pigu ENSDARG00000075530 348 1.554 - - - - - 0.703 - 0.851 - phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
88. cyb5r4 ENSDARG00000020898 119 1.546 - - 0.737 - - - - 0.809 - cytochrome b5 reductase 4 [Source:ZFIN;Acc:ZDB-GENE-050522-225]
89. gpr161 ENSDARG00000055659 454 1.545 - - - - - 0.731 - 0.814 - G protein-coupled receptor 161 [Source:ZFIN;Acc:ZDB-GENE-030616-58]
90. lrp8 ENSDARG00000070074, ENSDARG00000116879 323 1.544 - 0.814 0.730 - - - - - - low density lipoprotein receptor-related protein 8, apolipoprotein e receptor [Source:ZFIN;Acc:ZDB-GENE-050506-134]
91. vta1 ENSDARG00000013732 6072 1.544 0.833 0.711 - - - - - - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
92. coasy ENSDARG00000042747 336 1.544 - - - - - 0.770 - 0.774 - CoA synthase [Source:ZFIN;Acc:ZDB-GENE-040912-137]
93. pik3ip1 ENSDARG00000003281 339 1.543 - 0.726 - 0.817 - - - - - phosphoinositide-3-kinase interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-031030-14]
94. ireb2 ENSDARG00000021466 699 1.539 - 0.797 - 0.742 - - - - - iron-responsive element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-051205-1]
95. TTF1_3 TTF1_3 215 1.539 - 0.743 - - - 0.796 - - -
96. ehmt2 ENSDARG00000102325 984 1.538 - - - - - - 0.810 0.728 - euchromatic histone-lysine N-methyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-010501-6]
97. shcbp1 ENSDARG00000102068, ENSDARG00000113939 423 1.536 - - 0.726 - - - 0.810 - - SHC SH2-domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5865]
98. CCDC115 ENSDARG00000033533, ENSDARG00000109365 353 1.525 - 0.753 - - - - 0.772 - - coiled-coil domain containing 115 [Source:ZFIN;Acc:ZDB-GENE-050227-20]
99. CU570791.5 CU570791.5 872 1.517 - 0.751 - - - - - 0.766 -
100. tubgcp3 ENSDARG00000029133, ENSDARG00000116225 525 1.513 - - - - - 0.758 0.755 - - tubulin, gamma complex associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-538]

There are 1895 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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