Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for swsap1

Gene Name Gene ID Reads Annotation
swsap1 ENSDARG00000093423 14 SWIM-type zinc finger 7 associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-071116-2]










Genes with expression patterns similar to swsap1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. swsap1 ENSDARG00000093423 14 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SWIM-type zinc finger 7 associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-071116-2]
2. si:dkeyp-51f12.2 ENSDARG00000095606 24 2 - 1.000 - - - - 1.000 - - si:dkeyp-51f12.2 [Source:ZFIN;Acc:ZDB-GENE-070705-546]
3. kcnh1a ENSDARG00000024167 9 2 - 1.000 - - - - 1.000 - - potassium voltage-gated channel, subfamily H (eag-related), member 1a [Source:ZFIN;Acc:ZDB-GENE-061226-1]
4. zgc:152968 ENSDARG00000037002 6 2 - 1.000 - - - - 1.000 - - zgc:152968 [Source:ZFIN;Acc:ZDB-GENE-061013-448]
5. tmem178 ENSDARG00000020758 77 2 - 1.000 - - - - 1.000 - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
6. CU652893.1 ENSDARG00000104131 3 2 - 1.000 - - - - 1.000 - -
7. si:dkey-85k15.4 ENSDARG00000095047 25 2 - 1.000 - - - - 1.000 - - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]
8. hsp70l_1 ENSDARG00000055723 72 1.906 - 1.000 - - 0.906 - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
9. cdc25d ENSDARG00000075599 7 1.874 - - - - - 0.874 1.000 - - cell division cycle 25 homolog d [Source:ZFIN;Acc:ZDB-GENE-090313-74]
10. si:ch211-235f1.3 ENSDARG00000095179 27 1.874 - - - - - 0.874 1.000 - - si:ch211-235f1.3 [Source:ZFIN;Acc:ZDB-GENE-091204-440]
11. klhl42 ENSDARG00000006011 46 1.871 - 1.000 - - - - 0.871 - - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
12. si:ch211-271g18.4 ENSDARG00000115564 197 1.848 - - - - - 0.848 1.000 - - si:ch211-271g18.4 [Source:ZFIN;Acc:ZDB-GENE-110914-58]
13. RNF122 RNF122 29 1.833 - - - - - - 1.000 - 0.833
14. UBASH3B_1 UBASH3B_1 28 1.811 - 0.961 0.850 - - - - - -
15. kcng3 ENSDARG00000061622 6 1.807 - - - - - - 0.959 - 0.848 potassium voltage-gated channel, subfamily G, member 3 [Source:ZFIN;Acc:ZDB-GENE-111111-9]
16. ccdc85a ENSDARG00000039497 24 1.794 - - - - 0.794 - 1.000 - - coiled-coil domain containing 85A [Source:ZFIN;Acc:ZDB-GENE-080220-55]
17. CABZ01088134.1 ENSDARG00000033587 4 1.758 - - - - - - 1.000 0.758 - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
18. ms4a17a.2 ENSDARG00000105674 32 1.747 - - - - - - 1.000 - 0.747 membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
19. msgn1 ENSDARG00000070546 188 1.745 - 1.000 - - - - 0.745 - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
20. supt3h ENSDARG00000098141 18 1.745 - 1.000 - - - - 0.745 - - SPT3 homolog, SAGA and STAGA complex component [Source:ZFIN;Acc:ZDB-GENE-040718-370]
21. ZDHHC1 ENSDARG00000077546 14 1.743 - - - - - 0.743 1.000 - - zinc finger, DHHC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-130925-1]
22. zgc:112242 11 1.739 - - - - - 0.739 1.000 - - zgc:112242
23. zgc:171704 ENSDARG00000018048 14 1.734 - 0.734 - - - - 1.000 - - zgc:171704 [Source:ZFIN;Acc:ZDB-GENE-070820-16]
24. BX572619.7 BX572619.7 31 1.658 - - - - - 0.743 0.915 - -
25. pde6a ENSDARG00000000380 40 1.62 - - - - - 0.884 0.736 - - phosphodiesterase 6A, cGMP-specific, rod, alpha [Source:ZFIN;Acc:ZDB-GENE-030616-42]
26. zgc:174712 zgc:174712 47 1.619 - - - - - 0.874 0.745 - -
27. CT955963.1 ENSDARG00000100370 23 1.594 - 0.794 - - 0.800 - - - -
28. CT583679.2 CT583679.2 10 1.586 - - - - - 0.827 0.759 - -
29. C11H3orf83 C11H3orf83 30 1.576 - - 0.702 - - 0.874 - - -
30. CABZ01071530.2 CABZ01071530.2 47 1.538 - - 0.793 - - - 0.745 - -
31. si:ch211-274f20.2 ENSDARG00000058579 51 1.468 - - - - - 0.766 0.702 - - si:ch211-274f20.2 [Source:ZFIN;Acc:ZDB-GENE-091204-91]
32. HIST2H3D HIST2H3D 105 1.45 - - - - - 0.743 0.707 - -
33. si:ch73-299h12.1 ENSDARG00000102321 233 1.428 - - - - - 0.708 0.720 - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
34. LRTM1 ENSDARG00000098742 21 1 - - - - - - 1.000 - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
35. si:ch211-188i4.4 5 1 - 1.000 - - - - - - - si:ch211-188i4.4, transcript variant X3
36. neu3.1 ENSDARG00000096382 9 1 - 1.000 - - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061201-39]
37. zgc:152698 32 1 - 1.000 - - - - - - - zgc:152698
38. si:ch211-108c6.2 14 1 - 1.000 - - - - - - - si:ch211-108c6.2
39. st6galnac1.2 ENSDARG00000043816 51 1 - - - - - - 1.000 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
40. b3galtla b3galtla 111 1 - 1.000 - - - - - - -
41. CABZ01068324.1 CABZ01068324.1 4 1 - 1.000 - - - - - - -
42. CU459152.1 CU459152.1 407 1 - 1.000 - - - - - - -
43. BX005294.2 ENSDARG00000109361 3 1 - 1.000 - - - - - - -
44. CDHR5 CDHR5 2 1 - - - - - - 1.000 - -
45. cdk5r1a ENSDARG00000037916 46 1 - 1.000 - - - - - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
46. tph2 ENSDARG00000057239, ENSDARG00000109777 55 1 - - - - - - 1.000 - - tryptophan hydroxylase 2 (tryptophan 5-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-040624-4]
47. FAXC FAXC 102 1 - 1.000 - - - - - - -
48. CABZ01007222.1 CABZ01007222.1 78 1 - 1.000 - - - - - - -
49. si:ch211-122l14.8 si:ch211-122l14.8 4 1 - 1.000 - - - - - - -
50. ifit2 ifit2 11 1 - - - - - - 1.000 - -
51. BX470131.1 BX470131.1 86 1 - 1.000 - - - - - - -
52. CABZ01087853.1 CABZ01087853.1 3 1 - - - - - - 1.000 - -
53. sytl4 ENSDARG00000102433 19 1 - 1.000 - - - - - - - synaptotagmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-070209-217]
54. mcm5_1 ENSDARG00000019507 10 1 - 1.000 - - - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
55. si:dkey-16n15.6 ENSDARG00000095805 18 1 - - - - - - 1.000 - - si:dkey-16n15.6 [Source:ZFIN;Acc:ZDB-GENE-110411-70]
56. FRMPD1 34 1 - - - - - - 1.000 - - FERM and PDZ domain containing 1, transcript variant X3
57. zgc:113263 ENSDARG00000045842 51 1 - - - - - - 1.000 - - zgc:113263 [Source:ZFIN;Acc:ZDB-GENE-050306-34]
58. arrb2a ENSDARG00000039215 5 1 - 1.000 - - - - - - - arrestin, beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-29]
59. si:ch211-214j24.15 ENSDARG00000063481 8 1 - 1.000 - - - - - - - si:ch211-214j24.15 [Source:ZFIN;Acc:ZDB-GENE-110914-85]
60. SNORA31 SNORA31 23 1 - 1.000 - - - - - - -
61. manba ENSDARG00000008238 25 1 - - - - - - 1.000 - - mannosidase, beta A, lysosomal [Source:ZFIN;Acc:ZDB-GENE-040426-721]
62. LRFN4_1 LRFN4_1 5 1 - 1.000 - - - - - - -
63. si:dkey-167k11.3 si:dkey-167k11.3 3 1 - - - - - - 1.000 - -
64. KIF2A_1 ENSDARG00000043571 189 1 - 1.000 - - - - - - - kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
65. si:ch73-7i4.1 ENSDARG00000094554 771 1 - 1.000 - - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
66. cysltr1 ENSDARG00000058246, ENSDARG00000116295 25 1 - - - - - - 1.000 - - cysteinyl leukotriene receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-250]
67. si:dkey-4c15.9 ENSDARG00000092152 1 1 - - - - - - 1.000 - - si:dkey-4c15.9 [Source:ZFIN;Acc:ZDB-GENE-050420-80]
68. LRFN4 LRFN4 59 1 - 1.000 - - - - - - -
69. zgc:92249 14 1 - - - - - - 1.000 - - zgc:92249
70. si:dkey-230i18.2 ENSDARG00000093532 0 1 - - - - - - 1.000 - - si:dkey-230i18.2 [Source:ZFIN;Acc:ZDB-GENE-070912-457]
71. zgc:153615 ENSDARG00000038981 105 1 - 1.000 - - - - - - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
72. si:dkey-188p4.1 si:dkey-188p4.1 1 1 - 1.000 - - - - - - -
73. si:dkey-71b5.6 ENSDARG00000098861 12 1 - 1.000 - - - - - - - si:dkey-71b5.6 [Source:NCBI gene;Acc:100294632]
74. lcp2b ENSDARG00000036215 15 1 - 1.000 - - - - - - - lymphocyte cytosolic protein 2b [Source:ZFIN;Acc:ZDB-GENE-081107-21]
75. CABZ01073954.1 CABZ01073954.1 258 1 - 1.000 - - - - - - -
76. si:dkey-193c22.1 ENSDARG00000093687 104 1 - 1.000 - - - - - - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
77. fbxo36b ENSDARG00000039152 7 1 - - - - - - 1.000 - - F-box protein 36b [Source:ZFIN;Acc:ZDB-GENE-060825-271]
78. nmrk1 ENSDARG00000037913 18 1 - 1.000 - - - - - - - nicotinamide riboside kinase 1 [Source:ZFIN;Acc:ZDB-GENE-050320-8]
79. si:dkey-276l13.3 si:dkey-276l13.3 8 1 - - - - - - 1.000 - -
80. prlrb ENSDARG00000045955 12 1 - - - - - - 1.000 - - prolactin receptor b [Source:ZFIN;Acc:ZDB-GENE-070705-155]
81. CABZ01073069.1 CABZ01073069.1 5 1 - - - - - - 1.000 - -
82. SIRT4 ENSDARG00000010415 118 1 - - - - - - 1.000 - - sirtuin 4 [Source:ZFIN;Acc:ZDB-GENE-041010-65]
83. si:dkey-100n10.2 101 1 - 1.000 - - - - - - - si:dkey-100n10.2
84. wasa ENSDARG00000015149 26 1 - - - - - - 1.000 - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) a [Source:ZFIN;Acc:ZDB-GENE-081104-419]
85. zgc:174224_1 ENSDARG00000093875 7 1 - 1.000 - - - - - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
86. chmp6b ENSDARG00000102024 37 1 - - - - - - 1.000 - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
87. si:dkey-119g10.3 si:dkey-119g10.3 0 1 - - - - - - 1.000 - -
88. gad1b ENSDARG00000027419 440 1 - 1.000 - - - - - - - glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
89. zgc:158432 ENSDARG00000067806, ENSDARG00000109239 4 1 - - - - - - 1.000 - - zgc:158432 [Source:ZFIN;Acc:ZDB-GENE-061201-57]
90. syne3 ENSDARG00000023237 23 1 - - - - - - 1.000 - - spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
91. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 1 - 1.000 - - - - - - -
92. valopa ENSDARG00000021150 71 1 - - - - - - 1.000 - - vertebrate ancient long opsin a [Source:ZFIN;Acc:ZDB-GENE-000427-4]
93. zgc:66455 ENSDARG00000052375 3 1 - 1.000 - - - - - - - zgc:66455 [Source:ZFIN;Acc:ZDB-GENE-040426-1642]
94. styx ENSDARG00000057699 48 1 - - - - - - 1.000 - - serine/threonine/tyrosine interacting protein [Source:ZFIN;Acc:ZDB-GENE-050522-45]
95. chrna6 ENSDARG00000055559 60 1 - 1.000 - - - - - - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
96. CIR1 ENSDARG00000099733 66 1 - 1.000 - - - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
97. znf330 ENSDARG00000020494 3 1 - - - - - - 1.000 - - zinc finger protein 330 [Source:ZFIN;Acc:ZDB-GENE-040426-2697]
98. BBX ENSDARG00000012699 79 1 - - - - - - 1.000 - - bobby sox homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-091204-306]
99. sergef ENSDARG00000070986, ENSDARG00000111782 48 1 - 1.000 - - - - - - - secretion regulating guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-061220-11]
100. BX927122.3 BX927122.3 19 1 - 1.000 - - - - - - -

There are 980 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA