Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for swi5

Gene Name Gene ID Reads Annotation
swi5 ENSDARG00000078492 1299 SWI5 homologous recombination repair protein [Source:ZFIN;Acc:ZDB-GENE-091204-368]










Genes with expression patterns similar to swi5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. swi5 ENSDARG00000078492 1299 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SWI5 homologous recombination repair protein [Source:ZFIN;Acc:ZDB-GENE-091204-368]
2. vcp ENSDARG00000020008, ENSDARG00000116074 2284 1.776 - 0.997 - - - - 0.779 - - valosin containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-5408]
3. pbx2 ENSDARG00000019717 6892 1.757 - 0.993 - - - - 0.764 - - pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
4. ddx19 ENSDARG00000005699 4602 1.74 0.750 0.990 - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
5. slc30a7 ENSDARG00000019998, ENSDARG00000112372 2967 1.74 0.742 0.998 - - - - - - - solute carrier family 30 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5650]
6. aurkb ENSDARG00000037640 4874 1.737 - 0.995 - - - - 0.742 - - aurora kinase B [Source:ZFIN;Acc:ZDB-GENE-020419-40]
7. ptprfa ENSDARG00000103479 1250 1.725 - 0.996 - - - - 0.729 - - protein tyrosine phosphatase, receptor type, f, a [Source:ZFIN;Acc:ZDB-GENE-020107-2]
8. r3hdm1 ENSDARG00000101458 5241 1.713 - 0.991 - - - - 0.722 - - R3H domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7119]
9. NPR2 ENSDARG00000104393 1875 1.713 - 0.998 - - - - 0.715 - - natriuretic peptide receptor 2 [Source:ZFIN;Acc:ZDB-GENE-141030-2]
10. khsrp ENSDARG00000026489 15738 1.699 - 0.980 - - - - 0.719 - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
11. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.699 - 0.991 - - - - 0.708 - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
12. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 1.656 - 0.923 - - - - 0.733 - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
13. exosc3 ENSDARG00000098334, ENSDARG00000104246 1287 1.51 - - - - - 0.784 0.726 - - exosome component 3 [Source:ZFIN;Acc:ZDB-GENE-050706-140]
14. fgfr3 ENSDARG00000004782, ENSDARG00000114756 1791 0.999 - 0.999 - - - - - - - fibroblast growth factor receptor 3 [Source:ZFIN;Acc:ZDB-GENE-000816-1]
15. pknox1.1 ENSDARG00000018765 2149 0.999 - 0.999 - - - - - - - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
16. TMEM106C ENSDARG00000098105 793 0.998 - 0.998 - - - - - - - transmembrane protein 106C [Source:ZFIN;Acc:ZDB-GENE-061013-562]
17. CABZ01112358.1 CABZ01112358.1 667 0.998 - 0.998 - - - - - - -
18. trmt11 ENSDARG00000040033 1348 0.998 - 0.998 - - - - - - - tRNA methyltransferase 11 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-953]
19. pmm2 ENSDARG00000037654 1783 0.998 - 0.998 - - - - - - - phosphomannomutase 2 [Source:ZFIN;Acc:ZDB-GENE-030722-6]
20. plagl2 ENSDARG00000076657 2057 0.998 - 0.998 - - - - - - - pleiomorphic adenoma gene-like 2 [Source:ZFIN;Acc:ZDB-GENE-020806-1]
21. casc5 1487 0.998 - 0.998 - - - - - - - cancer susceptibility candidate 5, transcript variant X3
22. mphosph6 ENSDARG00000093007 340 0.998 - 0.998 - - - - - - - M-phase phosphoprotein 6 [Source:ZFIN;Acc:ZDB-GENE-040801-137]
23. kat2a ENSDARG00000104734 802 0.998 - 0.998 - - - - - - - K(lysine) acetyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080403-11]
24. colgalt2 ENSDARG00000014670 1932 0.998 - 0.998 - - - - - - - collagen beta(1-O)galactosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070222-1]
25. mgat1b ENSDARG00000036065 996 0.998 - 0.998 - - - - - - - mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase b [Source:ZFIN;Acc:ZDB-GENE-061103-589]
26. ap1g1 ENSDARG00000102394 818 0.998 - 0.998 - - - - - - - adaptor related protein complex 1 subunit gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3187]
27. tmtc4 ENSDARG00000020447 873 0.998 - 0.998 - - - - - - - transmembrane and tetratricopeptide repeat containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-148]
28. pak6b ENSDARG00000052405 537 0.998 - 0.998 - - - - - - - p21 protein (Cdc42/Rac)-activated kinase 6b [Source:ZFIN;Acc:ZDB-GENE-041014-121]
29. dzip1 ENSDARG00000000943, ENSDARG00000113867 911 0.998 - 0.998 - - - - - - - DAZ interacting zinc finger protein 1 [Source:ZFIN;Acc:ZDB-GENE-040526-1]
30. wu:fc34e06 1793 0.998 - 0.998 - - - - - - - wu:fc34e06, transcript variant X10
31. SMAD4 SMAD4 3233 0.997 - 0.997 - - - - - - -
32. mcrs1 ENSDARG00000020840 3232 0.997 - 0.997 - - - - - - - microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
33. irf6 ENSDARG00000101986 1438 0.997 - 0.997 - - - - - - - interferon regulatory factor 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1137]
34. ppp1caa ENSDARG00000003486, ENSDARG00000115977 5931 0.997 - 0.997 - - - - - - - protein phosphatase 1, catalytic subunit, alpha isozyme a [Source:ZFIN;Acc:ZDB-GENE-040516-3]
35. serinc5 ENSDARG00000008153 2863 0.997 - 0.997 - - - - - - - serine incorporator 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2918]
36. DDX24 ENSDARG00000104708 861 0.997 - 0.997 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 24 [Source:ZFIN;Acc:ZDB-GENE-100716-4]
37. ppp3cca ENSDARG00000014962, ENSDARG00000112030 1301 0.997 - 0.997 - - - - - - - protein phosphatase 3, catalytic subunit, gamma isozyme, a [Source:ZFIN;Acc:ZDB-GENE-030829-36]
38. PWWP2A ENSDARG00000075526 2163 0.997 - 0.997 - - - - - - - PWWP domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-131120-4]
39. psmg2 ENSDARG00000035987 1938 0.997 - 0.997 - - - - - - - proteasome (prosome, macropain) assembly chaperone 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1972]
40. NRD1 NRD1 3486 0.997 - 0.997 - - - - - - -
41. sf3a2 ENSDARG00000021107 2929 0.997 - 0.997 - - - - - - - splicing factor 3a, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-897]
42. CABZ01074130.1 ENSDARG00000105274 26501 0.997 - 0.997 - - - - - - -
43. ccdc80 ENSDARG00000000002 1284 0.997 - 0.997 - - - - - - - coiled-coil domain containing 80 [Source:ZFIN;Acc:ZDB-GENE-030616-56]
44. nr4a1 ENSDARG00000000796, ENSDARG00000109473 1072 0.997 - 0.997 - - - - - - - nuclear receptor subfamily 4, group A, member 1 [Source:ZFIN;Acc:ZDB-GENE-040704-11]
45. rabggtb ENSDARG00000068587 1935 0.997 - 0.997 - - - - - - - Rab geranylgeranyltransferase subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-2116]
46. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 0.997 - 0.997 - - - - - - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
47. ddx27 ENSDARG00000091831 1471 0.997 - 0.997 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
48. tubb5 ENSDARG00000037997 18691 0.996 - 0.996 - - - - - - - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
49. si:ch73-265d7.2 ENSDARG00000116713 2142 0.996 - 0.996 - - - - - - - si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]
50. notch1b ENSDARG00000052094 7874 0.996 - 0.996 - - - - - - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
51. slc25a33 ENSDARG00000039931 2794 0.996 - 0.996 - - - - - - - solute carrier family 25 (pyrimidine nucleotide carrier), member 33 [Source:ZFIN;Acc:ZDB-GENE-040426-2183]
52. erbb2 ENSDARG00000026294, ENSDARG00000112475 2704 0.995 - 0.995 - - - - - - - erb-b2 receptor tyrosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-031118-121]
53. klhl40b ENSDARG00000019125 3633 0.995 - 0.995 - - - - - - - kelch-like family member 40b [Source:ZFIN;Acc:ZDB-GENE-060227-1]
54. klc2 3058 0.995 - 0.995 - - - - - - - kinesin light chain 2
55. med12 ENSDARG00000103953, ENSDARG00000109815, ENSDARG00000116469 1894 0.995 - 0.995 - - - - - - - mediator complex subunit 12 [Source:ZFIN;Acc:ZDB-GENE-060125-1]
56. aldh9a1b ENSDARG00000037061 2638 0.995 - 0.995 - - - - - - - aldehyde dehydrogenase 9 family, member A1b [Source:ZFIN;Acc:ZDB-GENE-040120-5]
57. mcm2 ENSDARG00000102798 8148 0.995 - 0.995 - - - - - - - minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]
58. BX324201.1 BX324201.1 3302 0.994 - 0.994 - - - - - - -
59. smyd2a ENSDARG00000055151 2505 0.994 - 0.994 - - - - - - - SET and MYND domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050320-126]
60. nutf2l ENSDARG00000014499 3927 0.994 - 0.994 - - - - - - - nuclear transport factor 2, like [Source:ZFIN;Acc:ZDB-GENE-020416-1]
61. entpd1 ENSDARG00000045066 2930 0.993 - 0.993 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-58]
62. pcf11 ENSDARG00000044625, ENSDARG00000114082 1885 0.993 - 0.993 - - - - - - - PCF11, cleavage and polyadenylation factor subunit [Source:ZFIN;Acc:ZDB-GENE-041114-175]
63. polr2l ENSDARG00000058349, ENSDARG00000113402 3300 0.993 - 0.993 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide L [Source:ZFIN;Acc:ZDB-GENE-050522-181]
64. otud5a ENSDARG00000059006 2073 0.993 - 0.993 - - - - - - - OTU deubiquitinase 5a [Source:ZFIN;Acc:ZDB-GENE-030616-61]
65. gnsb ENSDARG00000098296 1075 0.992 - 0.992 - - - - - - - glucosamine (N-acetyl)-6-sulfatase (Sanfilippo disease IIID), b [Source:ZFIN;Acc:ZDB-GENE-030131-5846]
66. hadhab ENSDARG00000060594 3664 0.992 - 0.992 - - - - - - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-041111-204]
67. pip5k2 pip5k2 5743 0.989 - 0.989 - - - - - - -
68. tuba8l3 ENSDARG00000070155 7525 0.989 - 0.989 - - - - - - - tubulin, alpha 8 like 3 [Source:ZFIN;Acc:ZDB-GENE-040801-77]
69. ebag9 ENSDARG00000040021 2217 0.988 - 0.988 - - - - - - - estrogen receptor binding site associated, antigen, 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1093]
70. nap1l4a ENSDARG00000070560, ENSDARG00000113907 4244 0.986 - 0.986 - - - - - - - nucleosome assembly protein 1-like 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9099]
71. ndufa8 ENSDARG00000058041, ENSDARG00000111900 5493 0.986 - 0.986 - - - - - - - NADH:ubiquinone oxidoreductase subunit A8 [Source:ZFIN;Acc:ZDB-GENE-040426-1688]
72. si:ch211-114l13.11 si:ch211-114l13.11 4727 0.982 - 0.982 - - - - - - -
73. chchd2 ENSDARG00000059304, ENSDARG00000112202 7438 0.982 - 0.982 - - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1737]
74. sumo3a ENSDARG00000028119 13447 0.976 - 0.976 - - - - - - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
75. chchd10 ENSDARG00000010717, ENSDARG00000111874 4782 0.975 - 0.975 - - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1753]
76. fabp7a ENSDARG00000007697 5211 0.973 - 0.973 - - - - - - - fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
77. polr2eb ENSDARG00000026183 2174 0.972 - 0.972 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide E, b [Source:ZFIN;Acc:ZDB-GENE-040801-83]
78. lmtk2 ENSDARG00000076324 1367 0.965 - 0.965 - - - - - - - lemur tyrosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-100812-11]
79. cdk1 ENSDARG00000087554, ENSDARG00000110840 8297 0.964 - 0.964 - - - - - - - cyclin-dependent kinase 1 [Source:ZFIN;Acc:ZDB-GENE-010320-1]
80. apg3l apg3l 5153 0.961 - 0.961 - - - - - - -
81. vdac3 ENSDARG00000003695 16776 0.96 - 0.960 - - - - - - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
82. tcp1 ENSDARG00000017891 7946 0.956 - 0.956 - - - - - - - t-complex 1 [Source:ZFIN;Acc:ZDB-GENE-990714-24]
83. calm1b ENSDARG00000034187 13158 0.95 - 0.950 - - - - - - - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
84. shmt1 ENSDARG00000052816 5463 0.94 - 0.940 - - - - - - - serine hydroxymethyltransferase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1558]
85. dldh ENSDARG00000008785 15202 0.939 - 0.939 - - - - - - - dihydrolipoamide dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040120-4]
86. serf2 ENSDARG00000074340, ENSDARG00000117120 21385 0.933 - 0.933 - - - - - - - small EDRK-rich factor 2 [Source:ZFIN;Acc:ZDB-GENE-041108-1]
87. fbxo11a ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 1129 0.932 - 0.932 - - - - - - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
88. apbb1 ENSDARG00000076560 1748 0.932 - 0.932 - - - - - - - amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65) [Source:ZFIN;Acc:ZDB-GENE-091118-127]
89. hspb8 ENSDARG00000058365, ENSDARG00000109236 8688 0.907 - 0.907 - - - - - - - heat shock protein b8 [Source:ZFIN;Acc:ZDB-GENE-030131-2480]
90. sf3a1 ENSDARG00000041887 6702 0.907 - 0.907 - - - - - - - splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
91. ak2 ENSDARG00000005926 7598 0.906 - 0.906 - - - - - - - adenylate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-512]
92. cmasa ENSDARG00000057334 949 0.906 - 0.906 - - - - - - - cytidine monophosphate N-acetylneuraminic acid synthetase a [Source:ZFIN;Acc:ZDB-GENE-050420-277]
93. hnrnpub ENSDARG00000004735 16496 0.903 - 0.903 - - - - - - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
94. junbb ENSDARG00000104773 2536 0.898 - 0.898 - - - - - - - JunB proto-oncogene, AP-1 transcription factor subunit b [Source:ZFIN;Acc:ZDB-GENE-040426-2666]
95. sumo1 ENSDARG00000044267 4242 0.878 - - - - - - 0.878 - - small ubiquitin-like modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2186]
96. pl10 pl10 10795 0.867 - - - - - - 0.867 - -
97. larsb ENSDARG00000019280 3924 0.863 - 0.863 - - - - - - - leucyl-tRNA synthetase b [Source:ZFIN;Acc:ZDB-GENE-030114-7]
98. lmnb1 ENSDARG00000044299 9817 0.862 - - - - - - 0.862 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
99. MAD2L2_1 MAD2L2_1 705 0.861 - - - 0.861 - - - - -
100. sdha ENSDARG00000016721 8255 0.86 - 0.860 - - - - - - - succinate dehydrogenase complex, subunit A, flavoprotein (Fp) [Source:ZFIN;Acc:ZDB-GENE-040426-874]

There are 500 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA