Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sub1a

Gene Name Gene ID Reads Annotation
sub1a ENSDARG00000053446 13383 SUB1 homolog, transcriptional regulator a [Source:ZFIN;Acc:ZDB-GENE-050522-151]










Genes with expression patterns similar to sub1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sub1a ENSDARG00000053446 13383 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SUB1 homolog, transcriptional regulator a [Source:ZFIN;Acc:ZDB-GENE-050522-151]
2. mapre1b ENSDARG00000002659 9119 1.946 - - - 0.953 - - 0.993 - - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
3. si:ch73-110p20.1 5932 1.936 - - - 0.943 - - 0.993 - - si:ch73-110p20.1
4. SH3BGRL ENSDARG00000058302 4525 1.928 - - - 0.936 - - 0.992 - - SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
5. azin1b ENSDARG00000035869, ENSDARG00000115647 9761 1.915 - - - 0.948 - - 0.967 - - antizyme inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-030121-1]
6. adssl ENSDARG00000012399 2271 1.845 - - - - 0.854 - 0.991 - - adenylosuccinate synthase, like [Source:ZFIN;Acc:ZDB-GENE-020419-28]
7. si:rp71-45k5.4 ENSDARG00000035679 10411 1.808 - - - - - 0.814 0.994 - - si:rp71-45k5.4 [Source:ZFIN;Acc:ZDB-GENE-060503-941]
8. emc6 ENSDARG00000035282 4981 1.795 - - - 0.943 - 0.852 - - - ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
9. ywhaqa ENSDARG00000042539 7034 1.784 - - - - 0.792 - 0.992 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-040122-5]
10. irx3a ENSDARG00000101076 3106 1.781 - - - - 0.790 - 0.991 - - iroquois homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-991119-5]
11. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.761 - - - 0.956 0.805 - - - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
12. fundc2 ENSDARG00000103740 3856 1.747 - - - - - - 0.994 - 0.753 fun14 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041010-26]
13. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.738 - - - 0.950 0.788 - - - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
14. ctnnb1 ENSDARG00000014571 12004 1.714 0.717 - - - - - 0.997 - - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
15. cct2 ENSDARG00000087206, ENSDARG00000104674 19049 1.711 - - - - 0.723 - 0.988 - - chaperonin containing TCP1, subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-020419-6]
16. zgc:110339 ENSDARG00000046030 8180 1.705 - 0.712 - - - - 0.993 - - zgc:110339 [Source:ZFIN;Acc:ZDB-GENE-050417-323]
17. rbm4.3 ENSDARG00000022129 28571 1.704 - 0.761 - - - - 0.943 - - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
18. ndufb8 ENSDARG00000010113 11385 1.698 - 0.706 - - - - 0.992 - - NADH:ubiquinone oxidoreductase subunit B8 [Source:ZFIN;Acc:ZDB-GENE-040426-1858]
19. eif1axb ENSDARG00000057912, ENSDARG00000111310 26395 1.698 - - - 0.786 - - 0.912 - - eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
20. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 1.696 - 0.968 - - - - - - 0.728 EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
21. hmgb2b ENSDARG00000053990 11519 1.684 - - - 0.972 - - - 0.712 - high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
22. paip2b ENSDARG00000008706 4255 1.683 - - - 0.952 - 0.731 - - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
23. lig3 ENSDARG00000052553 2665 1.681 - - - 0.945 - 0.736 - - - ligase III, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-030131-8453]
24. stmn1a ENSDARG00000004169 21169 1.671 0.723 - - 0.948 - - - - - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
25. C20H12orf57 C20H12orf57 3325 1.64 - 0.812 - - - 0.828 - - -
26. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.639 - 0.801 - - 0.838 - - - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
27. sh3bp4a ENSDARG00000020000 1049 1.626 - 0.810 - - - 0.816 - - - SH3-domain binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-040303-3]
28. vdac1 ENSDARG00000045132 8051 1.621 - - - 0.782 0.839 - - - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
29. krcp ENSDARG00000040224 5961 1.609 - - - - - 0.895 - - 0.714 kelch repeat-containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-2126]
30. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 1.609 - 0.805 - - - 0.804 - - - ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
31. smc4 ENSDARG00000038882 4373 1.606 0.804 - 0.802 - - - - - - structural maintenance of chromosomes 4 [Source:ZFIN;Acc:ZDB-GENE-020419-21]
32. usp9 ENSDARG00000013708 9057 1.593 - 0.786 - - - 0.807 - - - ubiquitin specific peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061019-1]
33. slc38a10 ENSDARG00000077081 1691 1.591 - 0.809 - - - 0.782 - - - solute carrier family 38, member 10 [Source:ZFIN;Acc:ZDB-GENE-050309-21]
34. prelid1a ENSDARG00000098671 4745 1.576 - - - - 0.735 0.841 - - - PRELI domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1341]
35. myh10 ENSDARG00000000103 7522 1.572 - 0.804 0.768 - - - - - - myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
36. tmem167a ENSDARG00000035914 3319 1.569 0.703 - - - - 0.866 - - - transmembrane protein 167A [Source:ZFIN;Acc:ZDB-GENE-050320-29]
37. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 1.544 - - - - 0.743 - 0.801 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
38. cnot6 cnot6 7029 1.542 - - 0.750 - 0.792 - - - -
39. cstf3 ENSDARG00000018904 6111 1.531 - 0.808 - 0.723 - - - - - cleavage stimulation factor, 3' pre-RNA, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1997]
40. akirin1 ENSDARG00000039969, ENSDARG00000116670 2533 1.529 0.721 0.808 - - - - - - - akirin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2178]
41. snrpa1 ENSDARG00000024651 3306 1.52 0.716 0.804 - - - - - - - small nuclear ribonucleoprotein polypeptide A' [Source:ZFIN;Acc:ZDB-GENE-041114-82]
42. pgam5 ENSDARG00000035608 4044 1.516 - 0.806 - - - - - - 0.710 PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
43. oser1 ENSDARG00000024669 676 1.514 0.780 - - - - 0.734 - - - oxidative stress responsive serine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1325]
44. srsf9 ENSDARG00000008097 2405 1.513 - - - - 0.787 - - - 0.726 serine/arginine-rich splicing factor 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2397]
45. dhx15 ENSDARG00000015392 7496 1.511 - 0.794 - - - - - - 0.717 DEAH (Asp-Glu-Ala-His) box helicase 15 [Source:ZFIN;Acc:ZDB-GENE-030131-650]
46. git2b ENSDARG00000042791, ENSDARG00000111846 1332 1.51 - 0.810 - - - 0.700 - - - G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
47. LPHN2 LPHN2 1971 1.502 - - - - 0.714 0.788 - - -
48. cdca8 ENSDARG00000043137 7541 1.499 - - - - 0.764 0.735 - - - cell division cycle associated 8 [Source:ZFIN;Acc:ZDB-GENE-041114-171]
49. utp18 ENSDARG00000102618 1983 1.496 - - - - 0.717 0.779 - - - UTP18 small subunit (SSU) processome component [Source:ZFIN;Acc:ZDB-GENE-060929-668]
50. seh1l ENSDARG00000004280 2915 1.493 0.722 - - - 0.771 - - - - SEH1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6689]
51. ttll4 ENSDARG00000078935 1663 1.49 - - - - 0.706 0.784 - - - tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
52. psmd8 ENSDARG00000020454 6645 1.486 - - 0.754 - - - - - 0.732 proteasome 26S subunit, non-ATPase 8 [Source:ZFIN;Acc:ZDB-GENE-040625-136]
53. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.479 - - - - 0.705 0.774 - - - euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
54. myef2 ENSDARG00000059398 6050 1.477 - - 0.731 - - 0.746 - - - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
55. srsf5a ENSDARG00000029818 15600 1.471 0.706 - 0.765 - - - - - - serine/arginine-rich splicing factor 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7336]
56. scaf4a ENSDARG00000077093 2408 1.46 - - - - 0.729 - - - 0.731 SR-related CTD-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9003]
57. atf4b2 atf4b2 4734 1.456 - - - - 0.735 - - - 0.721
58. PPP1R8 PPP1R8 1897 1.439 - - - - 0.717 0.722 - - -
59. C17H15orf41 C17H15orf41 313 1.438 - - - - 0.709 0.729 - - -
60. G3BP2_1 G3BP2_1 2390 1.42 - - - - - - - 0.705 0.715
61. zranb2 ENSDARG00000044332 6723 0.996 - - - - - - 0.996 - - zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
62. snrnp27 ENSDARG00000035625 9080 0.995 - - - - - - 0.995 - - small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
63. AP2A1 ENSDARG00000054320 5591 0.994 - - - - - - 0.994 - - adaptor related protein complex 2 subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090302-2]
64. mapk6 ENSDARG00000032103 6422 0.993 - - - - - - 0.993 - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
65. arf6b ENSDARG00000052928 4585 0.993 - - - - - - 0.993 - - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
66. slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 0.993 - - - - - - 0.993 - - slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]
67. nfil3-5 ENSDARG00000094965, ENSDARG00000113345 4657 0.993 - - - - - - 0.993 - - nuclear factor, interleukin 3 regulated, member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-7677]
68. meis1 meis1 6937 0.993 - - - - - - 0.993 - -
69. h1fx ENSDARG00000054058 4075 0.993 - - - - - - 0.993 - - H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
70. TNRC6C_1 TNRC6C_1 6574 0.993 - - - - - - 0.993 - -
71. fubp1 ENSDARG00000029248 15259 0.993 - - - - - - 0.993 - - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
72. hoxb3a ENSDARG00000029263 5493 0.992 - - - - - - 0.992 - - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
73. mtmr14 ENSDARG00000059642 1405 0.992 - - - - - - 0.992 - - myotubularin related protein 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2649]
74. rbms1a ENSDARG00000074023 2742 0.992 - - - - - - 0.992 - - RNA binding motif, single stranded interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4967]
75. elmo1 ENSDARG00000098753 6966 0.992 - - - - - - 0.992 - - engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
76. timm13 ENSDARG00000058297 4447 0.992 - - - - - - 0.992 - - translocase of inner mitochondrial membrane 13 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-167]
77. zgc:77849 ENSDARG00000012458, ENSDARG00000116615 21205 0.992 - - - - - - 0.992 - - zgc:77849 [Source:ZFIN;Acc:ZDB-GENE-030131-1107]
78. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 0.992 - - - - - - 0.992 - - regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
79. gabarapa ENSDARG00000035557, ENSDARG00000110690 6723 0.992 - - - - - - 0.992 - - GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]
80. fbl ENSDARG00000053912 5891 0.991 - - - - - - 0.991 - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
81. med6 ENSDARG00000034734 2711 0.991 - - - - - - 0.991 - - mediator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040625-61]
82. ARHGAP35 2409 0.991 - - - - - - 0.991 - - Rho GTPase activating protein 35b, transcript variant X2
83. ndufb4 ENSDARG00000019332, ENSDARG00000110786, ENSDARG00000113951 11340 0.991 - - - - - - 0.991 - - NADH:ubiquinone oxidoreductase subunit B4 [Source:ZFIN;Acc:ZDB-GENE-040426-1973]
84. arpc3 ENSDARG00000057882 10113 0.991 - - - - - - 0.991 - - actin related protein 2/3 complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040625-107]
85. tob1b ENSDARG00000021372 7048 0.991 - - - - - - 0.991 - - transducer of ERBB2, 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2151]
86. grpel2 ENSDARG00000069421 5673 0.991 - - - - - - 0.991 - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
87. CAMK2G CAMK2G 3537 0.991 - - - - - - 0.991 - -
88. xpo4 ENSDARG00000010281, ENSDARG00000109463 2010 0.99 - - - - - - 0.990 - - exportin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3062]
89. cd276 ENSDARG00000003061 2798 0.99 - - - - - - 0.990 - - CD276 molecule [Source:ZFIN;Acc:ZDB-GENE-070112-452]
90. prkacba ENSDARG00000001782 1340 0.99 - - - - - - 0.990 - - protein kinase, cAMP-dependent, catalytic, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1351]
91. degs1 ENSDARG00000007347 2481 0.99 - - - - - - 0.990 - - delta(4)-desaturase, sphingolipid 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5283]
92. etv5a ENSDARG00000069763, ENSDARG00000112509, ENSDARG00000113729 1954 0.99 - - - - - - 0.990 - - ets variant 5a [Source:ZFIN;Acc:ZDB-GENE-030131-9572]
93. pfkma ENSDARG00000014179 1293 0.99 - - - - - - 0.990 - - phosphofructokinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-040912-135]
94. ppa1b ENSDARG00000030441 9027 0.99 - - - - - - 0.990 - - pyrophosphatase (inorganic) 1b [Source:ZFIN;Acc:ZDB-GENE-050417-375]
95. ZNF462 ENSDARG00000112909 1132 0.99 - - - - - - 0.990 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
96. gys1 ENSDARG00000016875 2037 0.99 - - - - - - 0.990 - - glycogen synthase 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1243]
97. ctdsp1 ENSDARG00000040674 2828 0.99 - - - - - - 0.990 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
98. GPANK1 ENSDARG00000053995 1535 0.99 - - - - - - 0.990 - - G patch domain and ankyrin repeats 1 [Source:ZFIN;Acc:ZDB-GENE-070928-32]
99. TUBB8P7 TUBB8P7 1353 0.99 - - - - - - 0.990 - -
100. prkag1 ENSDARG00000003818 2800 0.99 - - - - - - 0.990 - - protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2188]

There are 1115 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA